RNA–Protein interactions for RNA: ENST00000372276.7

CD40-201, Transcript of CD40 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD40, Length 1,623 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-201ENST00000372276 FAM83DQ9H4H8 585 aa17.63■□□□□ 0.41
CD40-201ENST00000372276 USE1Q9NZ43 259 aa17.63■□□□□ 0.41
CD40-201ENST00000372276 B4GALT6Q9UBX8 382 aa17.63■□□□□ 0.41
CD40-201ENST00000372276 KCNE1BA0A087WTH5 132 aa17.62■□□□□ 0.41
CD40-201ENST00000372276 TSPAN11A1L157 253 aa17.62■□□□□ 0.41
CD40-201ENST00000372276 H3BSA7 217 aa17.62■□□□□ 0.41
CD40-201ENST00000372276 CXCR6O00574 342 aa17.62■□□□□ 0.41
CD40-201ENST00000372276 DFNA5O60443 496 aa17.62■□□□□ 0.41
CD40-201ENST00000372276 MYCP01106 439 aaPredicted RBP17.62■□□□□ 0.41
CD40-201ENST00000372276 UGT2B4P06133 528 aa17.62■□□□□ 0.41
CD40-201ENST00000372276 SPATA31D3P0C874 917 aa17.62■□□□□ 0.41
CD40-201ENST00000372276 HSD3B1P14060 373 aa17.62■□□□□ 0.41
CD40-201ENST00000372276 LHCGRP22888 699 aa17.62■□□□□ 0.41
CD40-201ENST00000372276 HSD3B2P26439 372 aa17.62■□□□□ 0.41
CD40-201ENST00000372276 CA8P35219 290 aa17.62■□□□□ 0.41
CD40-201ENST00000372276 RPS6KA3P51812 740 aa17.62■□□□□ 0.41
CD40-201ENST00000372276 DEFB103AP81534 67 aa17.62■□□□□ 0.41
CD40-201ENST00000372276 B4GALNT1Q00973 533 aa17.62■□□□□ 0.41
CD40-201ENST00000372276 SRSF11Q05519 484 aaKnown RBP17.62■□□□□ 0.41
CD40-201ENST00000372276 PCDH1Q08174 1060 aa17.62■□□□□ 0.41
CD40-201ENST00000372276 ABHD18Q0P651 414 aa17.62■□□□□ 0.41
CD40-201ENST00000372276 SPANXN4Q5MJ08 99 aa17.62■□□□□ 0.41
CD40-201ENST00000372276 FAM117BQ6P1L5 589 aa17.62■□□□□ 0.41
CD40-201ENST00000372276 SPATA31D4Q6ZUB0 917 aa17.62■□□□□ 0.41
CD40-201ENST00000372276 GPR149Q86SP6 731 aa17.62■□□□□ 0.41
CD40-201ENST00000372276 KLHDC8AQ8IYD2 350 aa17.62■□□□□ 0.41
CD40-201ENST00000372276 TTC16Q8NEE8 873 aa17.62■□□□□ 0.41
CD40-201ENST00000372276 FAM162AQ96A26 154 aa17.62■□□□□ 0.41
CD40-201ENST00000372276 HBEGFQ99075 208 aa17.62■□□□□ 0.41
CD40-201ENST00000372276 CORO1BQ9BR76 489 aa17.62■□□□□ 0.41
CD40-201ENST00000372276 ZSCAN5AQ9BUG6 496 aa17.62■□□□□ 0.41
CD40-201ENST00000372276 ACPTQ9BZG2 426 aa17.62■□□□□ 0.41
CD40-201ENST00000372276 ZFP14Q9HCL3 533 aa17.62■□□□□ 0.41
CD40-201ENST00000372276 ATP11BQ9Y2G3 1177 aa17.62■□□□□ 0.41
CD40-201ENST00000372276 PCDHGA11Q9Y5H2 935 aa17.62■□□□□ 0.41
CD40-201ENST00000372276 IRAK3Q9Y616 596 aa17.62■□□□□ 0.41
CD40-201ENST00000372276 AP1M2Q9Y6Q5 423 aa17.62■□□□□ 0.41
CD40-201ENST00000372276 PLXNB3Q9ULL4 1909 aa17.62■□□□□ 0.41
CD40-201ENST00000372276 PLOD2O00469 737 aa17.61■□□□□ 0.41
CD40-201ENST00000372276 TIMP1P01033 207 aa17.61■□□□□ 0.41
CD40-201ENST00000372276 PDYNP01213 254 aa17.61■□□□□ 0.41
CD40-201ENST00000372276 THRBP10828 461 aa17.61■□□□□ 0.41
CD40-201ENST00000372276 JUPP14923 745 aa17.61■□□□□ 0.41
CD40-201ENST00000372276 TCF3P15923 654 aa17.61■□□□□ 0.41
CD40-201ENST00000372276 PRPS1L1P21108 318 aa17.61■□□□□ 0.41
CD40-201ENST00000372276 CTSOP43234 321 aaPredicted RBP17.61■□□□□ 0.41
CD40-201ENST00000372276 STK19P49842 368 aaPredicted RBP17.61■□□□□ 0.41
CD40-201ENST00000372276 PNLIPRP1P54315 467 aa17.61■□□□□ 0.41
CD40-201ENST00000372276 HSPA14Q0VDF9 509 aa17.61■□□□□ 0.41
CD40-201ENST00000372276 SELPLGQ14242 412 aa17.61■□□□□ 0.41
CD40-201ENST00000372276 CPSF6Q16630 551 aaKnown RBP eCLIP17.61■□□□□ 0.41
CD40-201ENST00000372276 SGO1Q5FBB7 561 aa17.61■□□□□ 0.41
CD40-201ENST00000372276 RBM48Q5RL73 367 aaKnown RBP17.61■□□□□ 0.41
CD40-201ENST00000372276 LDLRAP1Q5SW96 308 aa17.61■□□□□ 0.41
CD40-201ENST00000372276 CALHM3Q86XJ0 350 aa17.61■□□□□ 0.41
CD40-201ENST00000372276 RASGRP3Q8IV61 690 aa17.61■□□□□ 0.41
CD40-201ENST00000372276 KIAA1958Q8N8K9 716 aa17.61■□□□□ 0.41
CD40-201ENST00000372276 OR10A6Q8NH74 314 aa17.61■□□□□ 0.41
CD40-201ENST00000372276 FAM110BQ8TC76 370 aa17.61■□□□□ 0.41
CD40-201ENST00000372276 FIG4Q92562 907 aa17.61■□□□□ 0.41
CD40-201ENST00000372276 IRF7Q92985 503 aa17.61■□□□□ 0.41
CD40-201ENST00000372276 VOPP1Q96AW1 172 aa17.61■□□□□ 0.41
CD40-201ENST00000372276 TBC1D20Q96BZ9 403 aa17.61■□□□□ 0.41
CD40-201ENST00000372276 FAM120BQ96EK7 910 aaKnown RBP17.61■□□□□ 0.41
CD40-201ENST00000372276 REXO5Q96IC2 774 aaKnown RBP17.61■□□□□ 0.41
CD40-201ENST00000372276 FCRL1Q96LA6 429 aa17.61■□□□□ 0.41
CD40-201ENST00000372276 RBM4BQ9BQ04 359 aaKnown RBP17.61■□□□□ 0.41
CD40-201ENST00000372276 RBM4Q9BWF3 364 aaKnown RBP17.61■□□□□ 0.41
CD40-201ENST00000372276 TRIM8Q9BZR9 551 aa17.61■□□□□ 0.41
CD40-201ENST00000372276 KAT8Q9H7Z6 458 aaKnown RBP17.61■□□□□ 0.41
CD40-201ENST00000372276 DCAF13Q9NV06 445 aaKnown RBP17.61■□□□□ 0.41
CD40-201ENST00000372276 DKK3Q9UBP4 350 aa17.61■□□□□ 0.41
CD40-201ENST00000372276 LIMD1Q9UGP4 676 aa17.61■□□□□ 0.41
CD40-201ENST00000372276 EVPLLA8MZ36 301 aa17.61■□□□□ 0.41
CD40-201ENST00000372276 G3V2T6 193 aa17.61■□□□□ 0.41
CD40-201ENST00000372276 SLC9A3R1O14745 358 aaPredicted RBP17.61■□□□□ 0.41
CD40-201ENST00000372276 SLCO2B1O94956 709 aa17.61■□□□□ 0.41
CD40-201ENST00000372276 PTPN2P17706 415 aa17.61■□□□□ 0.41
CD40-201ENST00000372276 POLR2EP19388 210 aaKnown RBP17.61■□□□□ 0.41
CD40-201ENST00000372276 MAP4P27816 1152 aaKnown RBP17.61■□□□□ 0.41
CD40-201ENST00000372276 MTHFRP42898 656 aa17.61■□□□□ 0.41
CD40-201ENST00000372276 HLCSP50747 726 aa17.61■□□□□ 0.41
CD40-201ENST00000372276 C21orf58P58505 322 aa17.61■□□□□ 0.41
CD40-201ENST00000372276 LRRC74AQ0VAA2 488 aa17.61■□□□□ 0.41
CD40-201ENST00000372276 TOP3AQ13472 1001 aaPredicted RBP17.61■□□□□ 0.41
CD40-201ENST00000372276 C10orf62Q5T681 223 aaPredicted RBP17.61■□□□□ 0.41
CD40-201ENST00000372276 FRG2Q64ET8 278 aa17.61■□□□□ 0.41
CD40-201ENST00000372276 ERICH5Q6P6B1 374 aa17.61■□□□□ 0.41
CD40-201ENST00000372276 KIAA0907Q7Z7F0 614 aaPredicted RBP17.61■□□□□ 0.41
CD40-201ENST00000372276 GPR180Q86V85 440 aa17.61■□□□□ 0.41
CD40-201ENST00000372276 CLEC4FQ8N1N0 589 aa17.61■□□□□ 0.41
CD40-201ENST00000372276 DDHD1Q8NEL9 900 aa17.61■□□□□ 0.41
CD40-201ENST00000372276 ZNF555Q8NEP9 628 aa17.61■□□□□ 0.41
CD40-201ENST00000372276 SKA2Q8WVK7 121 aaPredicted RBP17.61■□□□□ 0.41
CD40-201ENST00000372276 TMBIM1Q969X1 311 aa17.61■□□□□ 0.41
CD40-201ENST00000372276 SLC47A1Q96FL8 570 aa17.61■□□□□ 0.41
CD40-201ENST00000372276 FRG2BQ96QU4 278 aa17.61■□□□□ 0.41
CD40-201ENST00000372276 BBS2Q9BXC9 721 aa17.61■□□□□ 0.41
CD40-201ENST00000372276 PAIP1Q9H074 479 aaKnown RBP17.61■□□□□ 0.41
CD40-201ENST00000372276 NTN4Q9HB63 628 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 139.7 ms