RNA–Protein interactions for RNA: ENST00000334690.10

TRAPPC11-201, Transcript of trafficking protein particle complex 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-201ENST00000334690 TMC8Q8IU68 726 aa16.73■□□□□ 0.27
TRAPPC11-201ENST00000334690 CLDN19Q8N6F1 224 aa16.73■□□□□ 0.27
TRAPPC11-201ENST00000334690 OR2T29Q8NH02 315 aa16.73■□□□□ 0.27
TRAPPC11-201ENST00000334690 ZUFSPQ96AP4 578 aa16.73■□□□□ 0.27
TRAPPC11-201ENST00000334690 FAM210AQ96ND0 272 aa16.73■□□□□ 0.27
TRAPPC11-201ENST00000334690 EBLN1P0CF75 366 aa16.73■□□□□ 0.27
TRAPPC11-201ENST00000334690 HAPLN1P10915 354 aaPredicted RBP16.73■□□□□ 0.27
TRAPPC11-201ENST00000334690 LEPRP48357 1165 aaKnown RBP16.73■□□□□ 0.27
TRAPPC11-201ENST00000334690 TGFBIQ15582 683 aa16.73■□□□□ 0.27
TRAPPC11-201ENST00000334690 TMEM44Q2T9K0 475 aa16.73■□□□□ 0.27
TRAPPC11-201ENST00000334690 IRAK1BP1Q5VVH5 260 aa16.73■□□□□ 0.27
TRAPPC11-201ENST00000334690 STEAP4Q687X5 459 aa16.73■□□□□ 0.27
TRAPPC11-201ENST00000334690 RAB43Q86YS6 212 aa16.73■□□□□ 0.27
TRAPPC11-201ENST00000334690 C9orf43Q8TAL5 461 aaPredicted RBP16.73■□□□□ 0.27
TRAPPC11-201ENST00000334690 DNASE1L2Q92874 299 aa16.73■□□□□ 0.27
TRAPPC11-201ENST00000334690 CYP2S1Q96SQ9 504 aa16.73■□□□□ 0.27
TRAPPC11-201ENST00000334690 CCDC106Q9BWC9 280 aa16.73■□□□□ 0.27
TRAPPC11-201ENST00000334690 PLOD3O60568 738 aa16.72■□□□□ 0.27
TRAPPC11-201ENST00000334690 UFM1P61960 85 aa16.72■□□□□ 0.27
TRAPPC11-201ENST00000334690 PITX1P78337 314 aaPredicted RBP16.72■□□□□ 0.27
TRAPPC11-201ENST00000334690 RING1Q06587 406 aa16.72■□□□□ 0.27
TRAPPC11-201ENST00000334690 SPIN4Q56A73 249 aa16.72■□□□□ 0.27
TRAPPC11-201ENST00000334690 MBOAT1Q6ZNC8 495 aa16.72■□□□□ 0.27
TRAPPC11-201ENST00000334690 FAM124AQ86V42 546 aa16.72■□□□□ 0.27
TRAPPC11-201ENST00000334690 OXR1Q8N573 874 aa16.72■□□□□ 0.27
TRAPPC11-201ENST00000334690 LCN9Q8WX39 176 aa16.72■□□□□ 0.27
TRAPPC11-201ENST00000334690 PPP1R14AQ96A00 147 aa16.72■□□□□ 0.27
TRAPPC11-201ENST00000334690 SLC35G5Q96KT7 338 aa16.72■□□□□ 0.27
TRAPPC11-201ENST00000334690 FBXL21Q9UKT6 434 aa16.72■□□□□ 0.27
TRAPPC11-201ENST00000334690 A0A1W2PRU2 124 aa16.72■□□□□ 0.27
TRAPPC11-201ENST00000334690 MTMR11A4FU01 709 aa16.72■□□□□ 0.27
TRAPPC11-201ENST00000334690 CCNKO75909 580 aa16.72■□□□□ 0.27
TRAPPC11-201ENST00000334690 POU2F1P14859 743 aa16.72■□□□□ 0.27
TRAPPC11-201ENST00000334690 WASP42768 502 aa16.72■□□□□ 0.27
TRAPPC11-201ENST00000334690 SLC9A5Q14940 896 aa16.72■□□□□ 0.27
TRAPPC11-201ENST00000334690 SLC2A7Q6PXP3 512 aa16.72■□□□□ 0.27
TRAPPC11-201ENST00000334690 IMP4Q96G21 291 aaKnown RBP16.72■□□□□ 0.27
TRAPPC11-201ENST00000334690 RAB11FIP5Q9BXF6 653 aa16.72■□□□□ 0.27
TRAPPC11-201ENST00000334690 POLR2J3Q9H1A7 115 aaKnown RBP16.72■□□□□ 0.27
TRAPPC11-201ENST00000334690 OR2AG1Q9H205 316 aa16.72■□□□□ 0.27
TRAPPC11-201ENST00000334690 RETREG1Q9H6L5 497 aa16.72■□□□□ 0.27
TRAPPC11-201ENST00000334690 SPATA7Q9P0W8 599 aa16.72■□□□□ 0.27
TRAPPC11-201ENST00000334690 FAM72CH0Y354 149 aa16.72■□□□□ 0.27
TRAPPC11-201ENST00000334690 ZNF623O75123 536 aa16.72■□□□□ 0.27
TRAPPC11-201ENST00000334690 PCCBP05166 539 aa16.72■□□□□ 0.27
TRAPPC11-201ENST00000334690 TIE1P35590 1138 aa16.72■□□□□ 0.27
TRAPPC11-201ENST00000334690 GSCP56915 257 aaPredicted RBP16.72■□□□□ 0.27
TRAPPC11-201ENST00000334690 SEMG2Q02383 582 aa16.72■□□□□ 0.27
TRAPPC11-201ENST00000334690 SLC10A2Q12908 348 aaPredicted RBP16.72■□□□□ 0.27
TRAPPC11-201ENST00000334690 DSC3Q14574 896 aa16.72■□□□□ 0.27
TRAPPC11-201ENST00000334690 FAM72AQ5TYM5 149 aa16.72■□□□□ 0.27
TRAPPC11-201ENST00000334690 FAM72DQ6L9T8 149 aa16.72■□□□□ 0.27
TRAPPC11-201ENST00000334690 CDH24Q86UP0 819 aa16.72■□□□□ 0.27
TRAPPC11-201ENST00000334690 FAM72BQ86X60 149 aa16.72■□□□□ 0.27
TRAPPC11-201ENST00000334690 ZNF461Q8TAF7 563 aa16.72■□□□□ 0.27
TRAPPC11-201ENST00000334690 SLC7A6OSQ96CW6 309 aaPredicted RBP16.72■□□□□ 0.27
TRAPPC11-201ENST00000334690 RTP4Q96DX8 246 aa16.72■□□□□ 0.27
TRAPPC11-201ENST00000334690 HERPUD2Q9BSE4 406 aa16.72■□□□□ 0.27
TRAPPC11-201ENST00000334690 RIIAD1A6NNX1 92 aa16.72■□□□□ 0.27
TRAPPC11-201ENST00000334690 ZNF30P17039 623 aa16.72■□□□□ 0.27
TRAPPC11-201ENST00000334690 MAGP20916 626 aa16.72■□□□□ 0.27
TRAPPC11-201ENST00000334690 NT5EP21589 574 aa16.72■□□□□ 0.27
TRAPPC11-201ENST00000334690 RHAGQ02094 409 aa16.72■□□□□ 0.27
TRAPPC11-201ENST00000334690 PPIGQ13427 754 aaKnown RBP eCLIP16.72■□□□□ 0.27
TRAPPC11-201ENST00000334690 ATAT1Q5SQI0 421 aa16.72■□□□□ 0.27
TRAPPC11-201ENST00000334690 PEG10Q86TG7 708 aaKnown RBP16.72■□□□□ 0.27
TRAPPC11-201ENST00000334690 OR10G2Q8NGC3 310 aa16.72■□□□□ 0.27
TRAPPC11-201ENST00000334690 CAMK1GQ96NX5 476 aa16.72■□□□□ 0.27
TRAPPC11-201ENST00000334690 PSKH2Q96QS6 385 aa16.72■□□□□ 0.27
TRAPPC11-201ENST00000334690 SYT11Q9BT88 431 aa16.72■□□□□ 0.27
TRAPPC11-201ENST00000334690 ZCCHC3Q9NUD5 404 aaKnown RBP16.72■□□□□ 0.27
TRAPPC11-201ENST00000334690 NLE1Q9NVX2 485 aaPredicted RBP16.72■□□□□ 0.27
TRAPPC11-201ENST00000334690 WWP2O00308 870 aa16.71■□□□□ 0.27
TRAPPC11-201ENST00000334690 TP73O15350 636 aa16.71■□□□□ 0.27
TRAPPC11-201ENST00000334690 SLBPQ14493 270 aaKnown RBP eCLIP16.71■□□□□ 0.27
TRAPPC11-201ENST00000334690 PTGES3Q15185 160 aaKnown RBP16.71■□□□□ 0.27
TRAPPC11-201ENST00000334690 SFT2D3Q587I9 215 aa16.71■□□□□ 0.27
TRAPPC11-201ENST00000334690 ZNF311Q5JNZ3 666 aa16.71■□□□□ 0.27
TRAPPC11-201ENST00000334690 TXNDC8Q6A555 127 aa16.71■□□□□ 0.27
TRAPPC11-201ENST00000334690 TTLQ8NG68 377 aa16.71■□□□□ 0.27
TRAPPC11-201ENST00000334690 RHEBL1Q8TAI7 183 aa16.71■□□□□ 0.27
TRAPPC11-201ENST00000334690 SCLYQ96I15 445 aa16.71■□□□□ 0.27
TRAPPC11-201ENST00000334690 FCRL3Q96P31 734 aaPredicted RBP16.71■□□□□ 0.27
TRAPPC11-201ENST00000334690 NSUN3Q9H649 340 aaKnown RBP16.71■□□□□ 0.27
TRAPPC11-201ENST00000334690 FBRSL1Q9HCM7 1045 aaKnown RBP16.71■□□□□ 0.27
TRAPPC11-201ENST00000334690 TMEM138Q9NPI0 162 aa16.71■□□□□ 0.27
TRAPPC11-201ENST00000334690 SLC22A14Q9Y267 594 aa16.71■□□□□ 0.27
TRAPPC11-201ENST00000334690 LRRC14BA6NHZ5 514 aa16.71■□□□□ 0.27
TRAPPC11-201ENST00000334690 LOC730098B7Z3J9 87 aa16.71■□□□□ 0.27
TRAPPC11-201ENST00000334690 SDHDO14521 159 aa16.71■□□□□ 0.27
TRAPPC11-201ENST00000334690 SCN2BO60939 215 aa16.71■□□□□ 0.27
TRAPPC11-201ENST00000334690 G6PDP11413 515 aa16.71■□□□□ 0.27
TRAPPC11-201ENST00000334690 ENGP17813 658 aa16.71■□□□□ 0.27
TRAPPC11-201ENST00000334690 OMPP47874 163 aa16.71■□□□□ 0.27
TRAPPC11-201ENST00000334690 PLA2G16P53816 162 aa16.71■□□□□ 0.27
TRAPPC11-201ENST00000334690 CRISP3P54108 245 aa16.71■□□□□ 0.27
TRAPPC11-201ENST00000334690 NDUFA9Q16795 377 aa16.71■□□□□ 0.27
TRAPPC11-201ENST00000334690 PDCD4Q53EL6 469 aaKnown RBP16.71■□□□□ 0.27
TRAPPC11-201ENST00000334690 USP30Q70CQ3 517 aa16.71■□□□□ 0.27
TRAPPC11-201ENST00000334690 GET4Q7L5D6 327 aaPredicted RBP16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms