RNA–Protein interactions for RNA: ENST00000219837.11

KNOP1-201, Transcript of lysine rich nucleolar protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene KNOP1, Length 6,432 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNOP1-201ENST00000219837 SLBPQ14493 270 aaKnown RBP eCLIP10.88□□□□□ -0.67
KNOP1-201ENST00000219837 RFTN1Q14699 578 aaPredicted RBP10.88□□□□□ -0.67
KNOP1-201ENST00000219837 FIP1L1Q6UN15 594 aaKnown RBP10.88□□□□□ -0.67
KNOP1-201ENST00000219837 MREGQ8N565 214 aa10.88□□□□□ -0.67
KNOP1-201ENST00000219837 OR4K17Q8NGC6 315 aa10.88□□□□□ -0.67
KNOP1-201ENST00000219837 OR5AK3PQ8NH89 298 aa10.88□□□□□ -0.67
KNOP1-201ENST00000219837 ADAD1Q96M93 576 aaKnown RBP10.88□□□□□ -0.67
KNOP1-201ENST00000219837 ZNF347Q96SE7 839 aa10.88□□□□□ -0.67
KNOP1-201ENST00000219837 MTERF1Q99551 399 aaKnown RBP10.88□□□□□ -0.67
KNOP1-201ENST00000219837 TMEM175Q9BSA9 504 aa10.88□□□□□ -0.67
KNOP1-201ENST00000219837 COL20A1Q9P218 1284 aa10.88□□□□□ -0.67
KNOP1-201ENST00000219837 KLK1P06870 262 aa10.87□□□□□ -0.67
KNOP1-201ENST00000219837 CCNOP22674 350 aa10.87□□□□□ -0.67
KNOP1-201ENST00000219837 SEPHS1P49903 392 aa10.87□□□□□ -0.67
KNOP1-201ENST00000219837 CYP27C1Q4G0S4 372 aa10.87□□□□□ -0.67
KNOP1-201ENST00000219837 PDSS1Q5T2R2 415 aa10.87□□□□□ -0.67
KNOP1-201ENST00000219837 MLIPQ5VWP3 458 aa10.87□□□□□ -0.67
KNOP1-201ENST00000219837 PTF1AQ7RTS3 328 aa10.87□□□□□ -0.67
KNOP1-201ENST00000219837 ZNF611Q8N823 705 aa10.87□□□□□ -0.67
KNOP1-201ENST00000219837 KCNC2Q96PR1 638 aa10.87□□□□□ -0.67
KNOP1-201ENST00000219837 C8orf4Q9NR00 106 aa10.87□□□□□ -0.67
KNOP1-201ENST00000219837 TMEM98Q9Y2Y6 226 aa10.87□□□□□ -0.67
KNOP1-201ENST00000219837 GRXCR1A8MXD5 290 aa10.87□□□□□ -0.67
KNOP1-201ENST00000219837 MID1O15344 667 aa10.87□□□□□ -0.67
KNOP1-201ENST00000219837 JAM2P57087 298 aa10.87□□□□□ -0.67
KNOP1-201ENST00000219837 NANOGNBQ7Z5D8 188 aa10.87□□□□□ -0.67
KNOP1-201ENST00000219837 CLEC4DQ8WXI8 215 aa10.87□□□□□ -0.67
KNOP1-201ENST00000219837 ESAMQ96AP7 390 aa10.87□□□□□ -0.67
KNOP1-201ENST00000219837 SLC22A18Q96BI1 424 aa10.87□□□□□ -0.67
KNOP1-201ENST00000219837 DUSP26Q9BV47 211 aa10.87□□□□□ -0.67
KNOP1-201ENST00000219837 TLR9Q9NR96 1032 aa10.87□□□□□ -0.67
KNOP1-201ENST00000219837 C1orf109Q9NX04 203 aa10.87□□□□□ -0.67
KNOP1-201ENST00000219837 ATXN10Q9UBB4 475 aa10.87□□□□□ -0.67
KNOP1-201ENST00000219837 PEX12O00623 359 aa10.87□□□□□ -0.67
KNOP1-201ENST00000219837 EDF1O60869 148 aaKnown RBP10.87□□□□□ -0.67
KNOP1-201ENST00000219837 LINGO3P0C6S8 592 aa10.87□□□□□ -0.67
KNOP1-201ENST00000219837 RPL5P46777 297 aaKnown RBP10.87□□□□□ -0.67
KNOP1-201ENST00000219837 CRISP3P54108 245 aa10.87□□□□□ -0.67
KNOP1-201ENST00000219837 PRMT2P55345 433 aa10.87□□□□□ -0.67
KNOP1-201ENST00000219837 MTPNP58546 118 aa10.87□□□□□ -0.67
KNOP1-201ENST00000219837 PDGFRLQ15198 375 aa10.87□□□□□ -0.67
KNOP1-201ENST00000219837 PQLC1Q8N2U9 271 aa10.87□□□□□ -0.67
KNOP1-201ENST00000219837 OXR1Q8N573 874 aa10.87□□□□□ -0.67
KNOP1-201ENST00000219837 TNFRSF25Q93038 417 aa10.87□□□□□ -0.67
KNOP1-201ENST00000219837 CHCHD6Q9BRQ6 235 aa10.87□□□□□ -0.67
KNOP1-201ENST00000219837 SUV39H2Q9H5I1 410 aa10.87□□□□□ -0.67
KNOP1-201ENST00000219837 ZNF639Q9UID6 485 aa10.87□□□□□ -0.67
KNOP1-201ENST00000219837 MROH1Q8NDA8 1641 aa10.87□□□□□ -0.67
KNOP1-201ENST00000219837 TCRBV7S2A1N4TA0A589 114 aa10.87□□□□□ -0.67
KNOP1-201ENST00000219837 LRCH4O75427 683 aa10.87□□□□□ -0.67
KNOP1-201ENST00000219837 INMTO95050 263 aa10.87□□□□□ -0.67
KNOP1-201ENST00000219837 ANGPTL1O95841 491 aa10.87□□□□□ -0.67
KNOP1-201ENST00000219837 SLC5A9Q2M3M2 681 aa10.87□□□□□ -0.67
KNOP1-201ENST00000219837 SPIN3Q5JUX0 258 aa10.87□□□□□ -0.67
KNOP1-201ENST00000219837 PDE12Q6L8Q7 609 aaKnown RBP10.87□□□□□ -0.67
KNOP1-201ENST00000219837 NOXRED1Q6NXP6 359 aa10.87□□□□□ -0.67
KNOP1-201ENST00000219837 DNAJB7Q7Z6W7 309 aaPredicted RBP10.87□□□□□ -0.67
KNOP1-201ENST00000219837 ZDHHC21Q8IVQ6 265 aa10.87□□□□□ -0.67
KNOP1-201ENST00000219837 FAM46DQ8NEK8 389 aa10.87□□□□□ -0.67
KNOP1-201ENST00000219837 MAPK15Q8TD08 544 aa10.87□□□□□ -0.67
KNOP1-201ENST00000219837 NCSTNQ92542 709 aa10.87□□□□□ -0.67
KNOP1-201ENST00000219837 SYT17Q9BSW7 474 aa10.87□□□□□ -0.67
KNOP1-201ENST00000219837 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP10.87□□□□□ -0.672e-7■■■■□ 24.8
KNOP1-201ENST00000219837 BRD7Q9NPI1 651 aa10.87□□□□□ -0.67
KNOP1-201ENST00000219837 PRAMEF33A0A0G2JMD5 474 aa10.87□□□□□ -0.67
KNOP1-201ENST00000219837 H3BSH0 61 aa10.87□□□□□ -0.67
KNOP1-201ENST00000219837 L7N2F9 121 aa10.87□□□□□ -0.67
KNOP1-201ENST00000219837 WNT7AO00755 349 aa10.87□□□□□ -0.67
KNOP1-201ENST00000219837 AXIN1O15169 862 aa10.87□□□□□ -0.67
KNOP1-201ENST00000219837 PRAMEF10O60809 474 aa10.87□□□□□ -0.67
KNOP1-201ENST00000219837 DNAJA2O60884 412 aa10.87□□□□□ -0.67
KNOP1-201ENST00000219837 SCELO95171 688 aa10.87□□□□□ -0.67
KNOP1-201ENST00000219837 ATP1B2P14415 290 aaPredicted RBP10.87□□□□□ -0.67
KNOP1-201ENST00000219837 FMO3P31513 532 aa10.87□□□□□ -0.67
KNOP1-201ENST00000219837 ZNF41P51814 821 aaPredicted RBP10.87□□□□□ -0.67
KNOP1-201ENST00000219837 CLRN1P58418 232 aa10.87□□□□□ -0.67
KNOP1-201ENST00000219837 VAMP2P63027 116 aa10.87□□□□□ -0.67
KNOP1-201ENST00000219837 CLEC12AQ5QGZ9 265 aa10.87□□□□□ -0.67
KNOP1-201ENST00000219837 PRAMEF14Q5SWL7 426 aa10.87□□□□□ -0.67
KNOP1-201ENST00000219837 PRAMEF13Q5VWM6 474 aa10.87□□□□□ -0.67
KNOP1-201ENST00000219837 MSANTD1Q6ZTZ1 278 aa10.87□□□□□ -0.67
KNOP1-201ENST00000219837 CEP97Q8IW35 865 aa10.87□□□□□ -0.67
KNOP1-201ENST00000219837 PGAM4Q8N0Y7 254 aa10.87□□□□□ -0.67
KNOP1-201ENST00000219837 METTL27Q8N6F8 245 aaPredicted RBP10.87□□□□□ -0.67
KNOP1-201ENST00000219837 NXPE2Q96DL1 559 aa10.87□□□□□ -0.67
KNOP1-201ENST00000219837 WDR77Q9BQA1 342 aaPredicted RBP10.87□□□□□ -0.67
KNOP1-201ENST00000219837 SEC61A2Q9H9S3 476 aa10.87□□□□□ -0.67
KNOP1-201ENST00000219837 FANCFQ9NPI8 374 aa10.87□□□□□ -0.67
KNOP1-201ENST00000219837 RAB26Q9ULW5 256 aa10.87□□□□□ -0.67
KNOP1-201ENST00000219837 PCDHGB7Q9Y5F8 929 aa10.87□□□□□ -0.67
KNOP1-201ENST00000219837 C3P01024 1663 aa10.87□□□□□ -0.67
KNOP1-201ENST00000219837 CDC7O00311 574 aa10.86□□□□□ -0.67
KNOP1-201ENST00000219837 NPHS1O60500 1241 aa10.86□□□□□ -0.67
KNOP1-201ENST00000219837 TBX18O95935 607 aa10.86□□□□□ -0.67
KNOP1-201ENST00000219837 PRPS2P11908 318 aa10.86□□□□□ -0.67
KNOP1-201ENST00000219837 PSMA1P25786 263 aaKnown RBP10.86□□□□□ -0.67
KNOP1-201ENST00000219837 GBX2P52951 348 aaPredicted RBP10.86□□□□□ -0.67
KNOP1-201ENST00000219837 ELOAQ14241 798 aaKnown RBP10.86□□□□□ -0.67
KNOP1-201ENST00000219837 SIRPB2Q5JXA9 342 aa10.86□□□□□ -0.67
KNOP1-201ENST00000219837 SH3PXD2AQ5TCZ1 1133 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 124.1 ms