RNA–Protein interactions for RNA: YNL278W

CAF120, Transcript of Part of the CCR4-NOT transcriptional regulatory complex, yeastyeast

Gene CAF120, Length 3,183 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CAF120YNL278W YOR378WQ08902 515 aa3.1□□□□□ -1.91
CAF120YNL278W EST1P17214 699 aaPredicted RBP3.1□□□□□ -1.91
CAF120YNL278W GAP1P19145 602 aaPredicted RBP3.1□□□□□ -1.91
CAF120YNL278W PPG1P32838 368 aa3.1□□□□□ -1.91
CAF120YNL278W RRP1P35178 278 aaPredicted RBP3.1□□□□□ -1.91
CAF120YNL278W PEX8P53248 589 aa3.1□□□□□ -1.91
CAF120YNL278W MDM1Q01846 1127 aa3.1□□□□□ -1.91
CAF120YNL278W RMT2Q03305 412 aa3.1□□□□□ -1.91
CAF120YNL278W NUT2Q06213 157 aa3.1□□□□□ -1.91
CAF120YNL278W CEX1Q12453 761 aa3.1□□□□□ -1.91
CAF120YNL278W UBR2Q07963 1872 aa3.1□□□□□ -1.91
CAF120YNL278W KAR1P11927 433 aa3.1□□□□□ -1.91
CAF120YNL278W SIT4P20604 311 aa3.1□□□□□ -1.91
CAF120YNL278W PIM1P36775 1133 aa3.1□□□□□ -1.91
CAF120YNL278W CEP3P40969 608 aa3.1□□□□□ -1.91
CAF120YNL278W LEM3P42838 414 aa3.1□□□□□ -1.91
CAF120YNL278W POL31P46957 487 aa3.1□□□□□ -1.91
CAF120YNL278W ITC1P53125 1264 aa3.1□□□□□ -1.91
CAF120YNL278W PUF6Q04373 656 aaKnown RBP3.1□□□□□ -1.91
CAF120YNL278W YPR172WQ06608 200 aa3.1□□□□□ -1.91
CAF120YNL278W GUD1Q07729 489 aa3.1□□□□□ -1.91
CAF120YNL278W THS1P04801 734 aaKnown RBP3.09□□□□□ -1.91
CAF120YNL278W STE5P32917 917 aa3.09□□□□□ -1.91
CAF120YNL278W KTR2P33550 425 aa3.09□□□□□ -1.91
CAF120YNL278W MYO3P36006 1272 aa3.09□□□□□ -1.91
CAF120YNL278W BUB1P41695 1021 aaKnown RBP RIP-Chip data3.09□□□□□ -1.91not detected
CAF120YNL278W FOL1P53848 824 aa3.09□□□□□ -1.91
CAF120YNL278W NKP1Q12493 238 aa3.09□□□□□ -1.91
CAF120YNL278W SEC23P15303 768 aaKnown RBP3.09□□□□□ -1.92
CAF120YNL278W MSM1P22438 575 aa3.09□□□□□ -1.92
CAF120YNL278W SPO11P23179 398 aa3.09□□□□□ -1.92
CAF120YNL278W KNS1P32350 737 aaPredicted RBP3.09□□□□□ -1.92
CAF120YNL278W CSE4P36012 229 aa3.09□□□□□ -1.92
CAF120YNL278W DRE2P36152 348 aa3.09□□□□□ -1.92
CAF120YNL278W NPR3P38742 1146 aa3.09□□□□□ -1.92
CAF120YNL278W EMP47P43555 445 aa3.09□□□□□ -1.92
CAF120YNL278W SSL1Q04673 461 aaPredicted RBP3.09□□□□□ -1.92
CAF120YNL278W NKP2Q06162 153 aa3.09□□□□□ -1.92
CAF120YNL278W GRE2Q12068 342 aaKnown RBP3.09□□□□□ -1.92
CAF120YNL278W SGT2Q12118 346 aaKnown RBP3.09□□□□□ -1.92
CAF120YNL278W RPS24AP0CX31 135 aaKnown RBP3.08□□□□□ -1.92
CAF120YNL278W RPS24BP0CX32 135 aaKnown RBP3.08□□□□□ -1.92
CAF120YNL278W GFA1P14742 717 aaKnown RBP3.08□□□□□ -1.92
CAF120YNL278W ALG1P16661 449 aa3.08□□□□□ -1.92
CAF120YNL278W PHO13P19881 312 aa3.08□□□□□ -1.92
CAF120YNL278W RPN12P32496 274 aa3.08□□□□□ -1.92
CAF120YNL278W SWI3P32591 825 aa3.08□□□□□ -1.92
CAF120YNL278W KTR3P38130 404 aaPredicted RBP3.08□□□□□ -1.92
CAF120YNL278W MNN1P39106 762 aa3.08□□□□□ -1.92
CAF120YNL278W XKS1P42826 600 aa3.08□□□□□ -1.92
CAF120YNL278W HST2P53686 357 aa3.08□□□□□ -1.92
CAF120YNL278W UBP3Q01477 912 aaKnown RBP RIP-Chip data3.08□□□□□ -1.92not detected
CAF120YNL278W ELG1Q12050 791 aa3.08□□□□□ -1.92
CAF120YNL278W SRS2P12954 1174 aa3.08□□□□□ -1.92
CAF120YNL278W ESS1P22696 170 aa3.08□□□□□ -1.92
CAF120YNL278W SRP40P32583 406 aaPredicted RBP3.08□□□□□ -1.92
CAF120YNL278W BYE1P36106 594 aa3.08□□□□□ -1.92
CAF120YNL278W MEP1P40260 492 aa3.08□□□□□ -1.92
CAF120YNL278W BNI5P53890 448 aaKnown RBP3.08□□□□□ -1.92
CAF120YNL278W ADE16P54113 591 aaKnown RBP3.08□□□□□ -1.92
CAF120YNL278W NOP58Q12499 511 aaKnown RBP3.08□□□□□ -1.92
CAF120YNL278W COBP00163 385 aa3.08□□□□□ -1.92
CAF120YNL278W SUP35P05453 685 aaKnown RBP3.08□□□□□ -1.92
CAF120YNL278W MPH2P0CD99 609 aa3.08□□□□□ -1.92
CAF120YNL278W TRX2P22803 104 aaKnown RBP3.08□□□□□ -1.92
CAF120YNL278W YKL091CP33324 310 aaKnown RBP3.08□□□□□ -1.92
CAF120YNL278W BMH2P34730 273 aaKnown RBP3.08□□□□□ -1.92
CAF120YNL278W BFA1P47113 574 aa3.08□□□□□ -1.92
CAF120YNL278W NNF2P53253 936 aa3.08□□□□□ -1.92
CAF120YNL278W RAT1Q02792 1006 aaKnown RBP3.08□□□□□ -1.92
CAF120YNL278W PRP3Q03338 469 aaPredicted RBP3.08□□□□□ -1.92
CAF120YNL278W BMS1Q08965 1183 aaKnown RBP3.08□□□□□ -1.92
CAF120YNL278W MSH1P25846 959 aa3.07□□□□□ -1.92
CAF120YNL278W PRP45P28004 379 aaPredicted RBP3.07□□□□□ -1.92
CAF120YNL278W MCM2P29469 868 aa3.07□□□□□ -1.92
CAF120YNL278W MRF1P30775 413 aaPredicted RBP3.07□□□□□ -1.92
CAF120YNL278W NIP1P32497 812 aaKnown RBP3.07□□□□□ -1.92
CAF120YNL278W RAD24P32641 659 aa3.07□□□□□ -1.92
CAF120YNL278W PEX2P32800 271 aa3.07□□□□□ -1.92
CAF120YNL278W LDH1P38139 375 aa3.07□□□□□ -1.92
CAF120YNL278W TOM71P38825 639 aaKnown RBP3.07□□□□□ -1.92
CAF120YNL278W TFG2P41896 400 aaPredicted RBP3.07□□□□□ -1.92
CAF120YNL278W ULI1P43604 169 aa3.07□□□□□ -1.92
CAF120YNL278W GPI8P49018 411 aa3.07□□□□□ -1.92
CAF120YNL278W NAF1P53919 492 aaKnown RBP3.07□□□□□ -1.92
CAF120YNL278W SYF1Q04048 859 aaPredicted RBP3.07□□□□□ -1.92
CAF120YNL278W MYO5Q04439 1219 aaKnown RBP3.07□□□□□ -1.92
CAF120YNL278W ABP140Q08641 628 aaKnown RBP3.07□□□□□ -1.92
CAF120YNL278W TCO89Q08921 799 aa3.07□□□□□ -1.92
CAF120YNL278W VPS5Q92331 675 aa3.07□□□□□ -1.92
CAF120YNL278W DPS1P04802 557 aaKnown RBP3.07□□□□□ -1.92
CAF120YNL278W PHO4P07270 312 aaKnown RBP3.07□□□□□ -1.92
CAF120YNL278W KEX2P13134 814 aa3.07□□□□□ -1.92
CAF120YNL278W SRO9P25567 434 aaKnown RBP3.07□□□□□ -1.92
CAF120YNL278W KIP2P28743 706 aa3.07□□□□□ -1.92
CAF120YNL278W RPC82P32349 654 aa3.07□□□□□ -1.92
CAF120YNL278W TFC3P34111 1160 aa3.07□□□□□ -1.92
CAF120YNL278W TCD1P38756 429 aa3.07□□□□□ -1.92
CAF120YNL278W YEN1P40028 759 aa3.07□□□□□ -1.92
CAF120YNL278W AIM20P40451 204 aa3.07□□□□□ -1.92
Retrieved 100 of 5,963 RNA–protein pairs in 58.9 ms