RNA–Protein interactions for RNA: YLR040C

AFB1, Transcript of MATalpha-specific a-factor blocker, yeastyeast

Gene AFB1, Length 675 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
AFB1YLR040C HOS3Q02959 697 aaKnown RBP4.43□□□□□ -1.7
AFB1YLR040C AOS1Q06624 347 aa4.43□□□□□ -1.7
AFB1YLR040C YPL260WQ08977 551 aa4.43□□□□□ -1.7
AFB1YLR040C TRP2P00899 507 aaKnown RBP4.42□□□□□ -1.7
AFB1YLR040C SNF5P18480 905 aa4.42□□□□□ -1.7
AFB1YLR040C PUF4P25339 888 aaKnown RBP RIP-Chip data4.42□□□□□ -1.7not detected
AFB1YLR040C LYP1P32487 611 aa4.42□□□□□ -1.7
AFB1YLR040C MOT2P34909 587 aaKnown RBP4.42□□□□□ -1.7
AFB1YLR040C BAP2P38084 609 aa4.42□□□□□ -1.7
AFB1YLR040C POL12P38121 705 aaPredicted RBP4.42□□□□□ -1.7
AFB1YLR040C RGD1P38339 666 aa4.42□□□□□ -1.7
AFB1YLR040C ORC3P54790 616 aa4.42□□□□□ -1.7
AFB1YLR040C VPS16Q03308 798 aa4.42□□□□□ -1.7
AFB1YLR040C SVF1Q05515 481 aa4.42□□□□□ -1.7
AFB1YLR040C SRO9P25567 434 aaKnown RBP4.41□□□□□ -1.7
AFB1YLR040C MAD1P40957 749 aa4.41□□□□□ -1.7
AFB1YLR040C TYW3P53177 273 aa4.41□□□□□ -1.7
AFB1YLR040C TNA1P53322 534 aa4.41□□□□□ -1.7
AFB1YLR040C GDE1Q02979 1223 aa4.41□□□□□ -1.7
AFB1YLR040C RSC58Q07979 502 aa4.41□□□□□ -1.7
AFB1YLR040C PIN2Q12057 282 aa4.41□□□□□ -1.7
AFB1YLR040C DBP2P24783 546 aaKnown RBP4.4□□□□□ -1.71
AFB1YLR040C AIM26P32858 118 aa4.4□□□□□ -1.71
AFB1YLR040C SEG2P34250 1132 aa4.4□□□□□ -1.71
AFB1YLR040C MCM7P38132 845 aa4.4□□□□□ -1.71
AFB1YLR040C MXR1P40029 184 aa4.4□□□□□ -1.71
AFB1YLR040C YLR225CQ05948 407 aaKnown RBP4.4□□□□□ -1.71
AFB1YLR040C DFG16Q99234 619 aa4.4□□□□□ -1.71
AFB1YLR040C INO1P11986 533 aa4.39□□□□□ -1.71
AFB1YLR040C CLN2P20438 545 aa4.39□□□□□ -1.71
AFB1YLR040C RPN3P40016 523 aaKnown RBP4.39□□□□□ -1.71
AFB1YLR040C AVT1P47082 602 aa4.39□□□□□ -1.71
AFB1YLR040C CWC24P53769 259 aa4.39□□□□□ -1.71
AFB1YLR040C UBP3Q01477 912 aaKnown RBP RIP-Chip data4.39□□□□□ -1.71 RIP-Chip
AFB1YLR040C ESC2Q06340 456 aa4.39□□□□□ -1.71
AFB1YLR040C YPL066WQ12194 479 aa4.39□□□□□ -1.71
AFB1YLR040C COQ4O13525 335 aa4.38□□□□□ -1.71
AFB1YLR040C ABZ1P37254 787 aaPredicted RBP4.38□□□□□ -1.71
AFB1YLR040C HNT2P49775 206 aa4.38□□□□□ -1.71
AFB1YLR040C RPL11AP0C0W9 174 aaKnown RBP4.37□□□□□ -1.71
AFB1YLR040C BAS1P22035 811 aa4.37□□□□□ -1.71
AFB1YLR040C ETP1P38748 585 aaKnown RBP4.37□□□□□ -1.71
AFB1YLR040C PIK1P39104 1066 aa4.37□□□□□ -1.71
AFB1YLR040C VAC8P39968 578 aa4.37□□□□□ -1.71
AFB1YLR040C YGL176CP46945 554 aa4.37□□□□□ -1.71
AFB1YLR040C ALD6P54115 500 aaKnown RBP4.37□□□□□ -1.71
AFB1YLR040C YDL177CQ12257 170 aa4.37□□□□□ -1.71
AFB1YLR040C RPL11BQ3E757 174 aaPredicted RBP4.37□□□□□ -1.71
AFB1YLR040C PRI2P20457 528 aa4.36□□□□□ -1.71
AFB1YLR040C ABD1P32783 436 aaPredicted RBP4.36□□□□□ -1.71
AFB1YLR040C CCZ1P38273 704 aa4.36□□□□□ -1.71
AFB1YLR040C PNT1P38969 423 aa4.36□□□□□ -1.71
AFB1YLR040C SIP5P40210 489 aaKnown RBP4.36□□□□□ -1.71
AFB1YLR040C ECL1P48235 211 aa4.36□□□□□ -1.71
AFB1YLR040C OPI10Q08202 246 aa4.36□□□□□ -1.71
AFB1YLR040C NBA1Q08229 501 aaKnown RBP4.36□□□□□ -1.71
AFB1YLR040C RSB1Q08417 382 aa4.36□□□□□ -1.71
AFB1YLR040C GNT1Q12096 491 aa4.36□□□□□ -1.71
AFB1YLR040C NAP1P25293 417 aaKnown RBP4.35□□□□□ -1.71
AFB1YLR040C RNQ1P25367 405 aa4.35□□□□□ -1.71
AFB1YLR040C YKL069WP36088 180 aa4.35□□□□□ -1.71
AFB1YLR040C SPO20Q04359 397 aa4.35□□□□□ -1.71
AFB1YLR040C RKM4Q12504 494 aa4.35□□□□□ -1.71
AFB1YLR040C SPS1P08458 490 aa4.34□□□□□ -1.71
AFB1YLR040C SPP382Q06411 708 aaPredicted RBP4.34□□□□□ -1.71
AFB1YLR040C FAL1Q12099 399 aaKnown RBP4.34□□□□□ -1.71
AFB1YLR040C SLA2P33338 968 aa4.33□□□□□ -1.72
AFB1YLR040C YKL107WP34251 309 aa4.33□□□□□ -1.72
AFB1YLR040C TSA1P34760 196 aaKnown RBP4.33□□□□□ -1.72
AFB1YLR040C UGA2P38067 497 aa4.33□□□□□ -1.72
AFB1YLR040C MBP1P39678 833 aa4.33□□□□□ -1.72
AFB1YLR040C SEC26P41810 973 aaKnown RBP4.33□□□□□ -1.72
AFB1YLR040C FOL2P51601 243 aaKnown RBP4.33□□□□□ -1.72
AFB1YLR040C MAP1Q01662 387 aaKnown RBP RIP-Chip data4.33□□□□□ -1.72not detected
AFB1YLR040C CDA2Q06703 312 aa4.33□□□□□ -1.72
AFB1YLR040C GAS1P22146 559 aaKnown RBP4.32□□□□□ -1.72
AFB1YLR040C AGP1P25376 633 aa4.32□□□□□ -1.72
AFB1YLR040C GEM1P39722 662 aa4.32□□□□□ -1.72
AFB1YLR040C MRPL22P53881 309 aa4.32□□□□□ -1.72
AFB1YLR040C ACM1Q08981 209 aa4.32□□□□□ -1.72
AFB1YLR040C SVS1Q12254 260 aa4.32□□□□□ -1.72
AFB1YLR040C BI4P03879 638 aa4.31□□□□□ -1.72
AFB1YLR040C SRM1P21827 482 aa4.31□□□□□ -1.72
AFB1YLR040C ELM1P32801 640 aa4.31□□□□□ -1.72
AFB1YLR040C PIN4P34217 668 aaKnown RBP RIP-Chip data4.31□□□□□ -1.72not detected
AFB1YLR040C YKL151CP36059 337 aa4.31□□□□□ -1.72
AFB1YLR040C VBA5P36172 582 aa4.31□□□□□ -1.72
AFB1YLR040C RFC5P38251 354 aa4.31□□□□□ -1.72
AFB1YLR040C MTC3P53077 123 aa4.31□□□□□ -1.72
AFB1YLR040C CYC1P00044 109 aaPredicted RBP4.3□□□□□ -1.72
AFB1YLR040C SBA1P28707 216 aaKnown RBP4.3□□□□□ -1.72
AFB1YLR040C IRC24P40580 263 aa4.3□□□□□ -1.72
AFB1YLR040C NOP7P53261 605 aaKnown RBP4.3□□□□□ -1.72
AFB1YLR040C ATG13Q06628 738 aa4.3□□□□□ -1.72
AFB1YLR040C RIB2Q12362 591 aaKnown RBP4.3□□□□□ -1.72
AFB1YLR040C ACE2P21192 770 aa4.29□□□□□ -1.72
AFB1YLR040C STE5P32917 917 aa4.29□□□□□ -1.72
AFB1YLR040C AIM3P38266 947 aaKnown RBP4.29□□□□□ -1.72
AFB1YLR040C SPF1P39986 1215 aaKnown RBP4.29□□□□□ -1.72
AFB1YLR040C NIT1P40447 199 aa4.29□□□□□ -1.72
Retrieved 100 of 5,963 RNA–protein pairs in 10.5 ms