RNA–Protein interactions for RNA: ENST00000639695.1

RFC1-217, Transcript of replication factor C subunit 1, humanhuman

TSL 5 BASIC

Gene RFC1, Length 867 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-217ENST00000639695 CYP2U1Q7Z449 544 aa11.21□□□□□ -0.61
RFC1-217ENST00000639695 NPM2Q86SE8 214 aaKnown RBP11.21□□□□□ -0.61
RFC1-217ENST00000639695 DCAF5Q96JK2 942 aa11.21□□□□□ -0.61
RFC1-217ENST00000639695 PLA2G4EQ3MJ16 856 aa11.2□□□□□ -0.62
RFC1-217ENST00000639695 SNRKQ9NRH2 765 aa11.2□□□□□ -0.62
RFC1-217ENST00000639695 ENAMQ9NRM1 1142 aa11.2□□□□□ -0.62
RFC1-217ENST00000639695 H7C1W4 665 aa11.19□□□□□ -0.62
RFC1-217ENST00000639695 FOXK2Q01167 660 aa11.19□□□□□ -0.62
RFC1-217ENST00000639695 RNF20Q5VTR2 975 aa11.19□□□□□ -0.62
RFC1-217ENST00000639695 MTMR14Q8NCE2 650 aa11.19□□□□□ -0.62
RFC1-217ENST00000639695 TIMMDC1Q9NPL8 285 aa11.19□□□□□ -0.62
RFC1-217ENST00000639695 WASLO00401 505 aaPredicted RBP11.18□□□□□ -0.62
RFC1-217ENST00000639695 IL2RAP01589 272 aa11.18□□□□□ -0.62
RFC1-217ENST00000639695 CDCA7Q9BWT1 371 aaPredicted RBP11.18□□□□□ -0.62
RFC1-217ENST00000639695 NUCKS1Q9H1E3 243 aaKnown RBP11.18□□□□□ -0.62
RFC1-217ENST00000639695 MX2P20592 715 aa11.17□□□□□ -0.62
RFC1-217ENST00000639695 TAS1R3Q7RTX0 852 aa11.17□□□□□ -0.62
RFC1-217ENST00000639695 CCDC125Q86Z20 511 aa11.17□□□□□ -0.62
RFC1-217ENST00000639695 NEDD1Q8NHV4 660 aa11.17□□□□□ -0.62
RFC1-217ENST00000639695 TRIM52Q96A61 297 aa11.17□□□□□ -0.62
RFC1-217ENST00000639695 TRERF1Q96PN7 1200 aa11.17□□□□□ -0.62
RFC1-217ENST00000639695 TRAIPQ9BWF2 469 aa11.17□□□□□ -0.62
RFC1-217ENST00000639695 F11P03951 625 aa11.16□□□□□ -0.62
RFC1-217ENST00000639695 CCDC85AQ96PX6 553 aaPredicted RBP11.16□□□□□ -0.62
RFC1-217ENST00000639695 GPAMQ9HCL2 828 aa11.16□□□□□ -0.62
RFC1-217ENST00000639695 PHKA2P46019 1235 aa11.15□□□□□ -0.62
RFC1-217ENST00000639695 CENPCQ03188 943 aa11.15□□□□□ -0.62
RFC1-217ENST00000639695 WDR44Q5JSH3 913 aa11.15□□□□□ -0.62
RFC1-217ENST00000639695 CNKSR1Q969H4 720 aa11.15□□□□□ -0.62
RFC1-217ENST00000639695 HRH3Q9Y5N1 445 aa11.15□□□□□ -0.62
RFC1-217ENST00000639695 C1orf229Q6ZS94 237 aaPredicted RBP11.14□□□□□ -0.63
RFC1-217ENST00000639695 SPOCK3Q9BQ16 436 aa11.14□□□□□ -0.63
RFC1-217ENST00000639695 PHF20L1A8MW92 1017 aa11.13□□□□□ -0.63
RFC1-217ENST00000639695 OIP5O43482 229 aa11.13□□□□□ -0.63
RFC1-217ENST00000639695 STAU1O95793 577 aaKnown RBP11.13□□□□□ -0.63
RFC1-217ENST00000639695 SNRPNP63162 240 aaKnown RBP11.13□□□□□ -0.63
RFC1-217ENST00000639695 UBAP2LQ14157 1087 aaKnown RBP11.13□□□□□ -0.63
RFC1-217ENST00000639695 BEND7Q8N7W2 519 aaPredicted RBP11.13□□□□□ -0.63
RFC1-217ENST00000639695 ESYT1Q9BSJ8 1104 aa11.13□□□□□ -0.63
RFC1-217ENST00000639695 SHISA8B8ZZ34 492 aa11.12□□□□□ -0.63
RFC1-217ENST00000639695 PROCP04070 461 aa11.12□□□□□ -0.63
RFC1-217ENST00000639695 MCCD1P59942 119 aaPredicted RBP11.12□□□□□ -0.63
RFC1-217ENST00000639695 GDPD2Q9HCC8 539 aa11.12□□□□□ -0.63
RFC1-217ENST00000639695 ACIN1Q9UKV3 1341 aaKnown RBP11.11□□□□□ -0.63
RFC1-217ENST00000639695 SOCS7O14512 581 aa11.11□□□□□ -0.63
RFC1-217ENST00000639695 MSTNO14793 375 aa11.11□□□□□ -0.63
RFC1-217ENST00000639695 GNRH1P01148 92 aa11.11□□□□□ -0.63
RFC1-217ENST00000639695 TSGA10IPQ3SY00 556 aa11.11□□□□□ -0.63
RFC1-217ENST00000639695 OXCT2Q9BYC2 517 aaPredicted RBP11.11□□□□□ -0.63
RFC1-217ENST00000639695 FHDC1Q9C0D6 1143 aaPredicted RBP11.11□□□□□ -0.63
RFC1-217ENST00000639695 NDUFB9Q9Y6M9 179 aa11.11□□□□□ -0.63
RFC1-217ENST00000639695 PDE4CQ08493 712 aa11.1□□□□□ -0.63
RFC1-217ENST00000639695 PODNQ7Z5L7 613 aa11.1□□□□□ -0.63
RFC1-217ENST00000639695 CALR3Q96L12 384 aaKnown RBP11.1□□□□□ -0.63
RFC1-217ENST00000639695 CEP126Q9P2H0 1117 aa11.1□□□□□ -0.63
RFC1-217ENST00000639695 PPP1R15AO75807 674 aaPredicted RBP11.09□□□□□ -0.63
RFC1-217ENST00000639695 ABL2P42684 1182 aa11.09□□□□□ -0.63
RFC1-217ENST00000639695 XAGE2Q96GT9 111 aa11.09□□□□□ -0.63
RFC1-217ENST00000639695 LRRC4BQ9NT99 713 aa11.09□□□□□ -0.63
RFC1-217ENST00000639695 C4orf17Q53FE4 359 aa11.08□□□□□ -0.64
RFC1-217ENST00000639695 KLRG1Q96E93 195 aa11.08□□□□□ -0.64
RFC1-217ENST00000639695 ZSCAN10Q96SZ4 725 aaPredicted RBP11.08□□□□□ -0.64
RFC1-217ENST00000639695 ADAM23O75077 832 aa11.07□□□□□ -0.64
RFC1-217ENST00000639695 CFHR5Q9BXR6 569 aa11.07□□□□□ -0.64
RFC1-217ENST00000639695 ESF1Q9H501 851 aaKnown RBP11.07□□□□□ -0.64
RFC1-217ENST00000639695 RUBCNLQ9H714 662 aa11.07□□□□□ -0.64
RFC1-217ENST00000639695 NSFL1CQ9UNZ2 370 aaKnown RBP11.07□□□□□ -0.64
RFC1-217ENST00000639695 AEBP1Q8IUX7 1158 aa11.06□□□□□ -0.64
RFC1-217ENST00000639695 A0A1B0GTH6 734 aa11.05□□□□□ -0.64
RFC1-217ENST00000639695 KRBA1A5PL33 1030 aa11.05□□□□□ -0.64
RFC1-217ENST00000639695 C2CD2LO14523 706 aa11.05□□□□□ -0.64
RFC1-217ENST00000639695 MAP2K3P46734 347 aa11.05□□□□□ -0.64
RFC1-217ENST00000639695 COL8A1P27658 744 aa11.04□□□□□ -0.64
RFC1-217ENST00000639695 MSX1P28360 303 aa11.04□□□□□ -0.64
RFC1-217ENST00000639695 GALNT6Q8NCL4 622 aa11.04□□□□□ -0.64
RFC1-217ENST00000639695 ZNF592Q92610 1267 aa11.04□□□□□ -0.64
RFC1-217ENST00000639695 MYCP01106 439 aaPredicted RBP11.03□□□□□ -0.64
RFC1-217ENST00000639695 HOXB4P17483 251 aaPredicted RBP11.03□□□□□ -0.64
RFC1-217ENST00000639695 PHTF2Q8N3S3 785 aa11.03□□□□□ -0.64
RFC1-217ENST00000639695 RETREG2Q8NC44 543 aa11.03□□□□□ -0.64
RFC1-217ENST00000639695 ABHD17AQ96GS6 310 aa11.03□□□□□ -0.64
RFC1-217ENST00000639695 ETNK1Q9HBU6 452 aa11.03□□□□□ -0.64
RFC1-217ENST00000639695 TBC1D2BQ9UPU7 963 aa11.03□□□□□ -0.64
RFC1-217ENST00000639695 TMEM214Q6NUQ4 689 aaKnown RBP11.02□□□□□ -0.65
RFC1-217ENST00000639695 NDFIP2Q9NV92 336 aa11.02□□□□□ -0.65
RFC1-217ENST00000639695 CTBSQ01459 385 aa11.01□□□□□ -0.65
RFC1-217ENST00000639695 GNASQ5JWF2 1037 aa11.01□□□□□ -0.65
RFC1-217ENST00000639695 XP32Q5T750 250 aa11.01□□□□□ -0.65
RFC1-217ENST00000639695 GLMNQ92990 594 aa11.01□□□□□ -0.65
RFC1-217ENST00000639695 BNIP3LO60238 219 aa11□□□□□ -0.65
RFC1-217ENST00000639695 EDARADDQ8WWZ3 215 aa11□□□□□ -0.65
RFC1-217ENST00000639695 IRF5Q13568 498 aa10.99□□□□□ -0.65
RFC1-217ENST00000639695 SUV39H2Q9H5I1 410 aa10.99□□□□□ -0.65
RFC1-217ENST00000639695 RRAGCQ9HB90 399 aa10.98□□□□□ -0.65
RFC1-217ENST00000639695 HCN2Q9UL51 889 aa10.98□□□□□ -0.65
RFC1-217ENST00000639695 ATXN7L1Q9ULK2 861 aaPredicted RBP10.98□□□□□ -0.65
RFC1-217ENST00000639695 DOLKQ9UPQ8 538 aa10.98□□□□□ -0.65
RFC1-217ENST00000639695 PHF24Q9UPV7 400 aa10.98□□□□□ -0.65
RFC1-217ENST00000639695 WASHC4Q2M389 1173 aa10.97□□□□□ -0.65
RFC1-217ENST00000639695 LINC00114Q6XXX2 140 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms