RNA–Protein interactions for RNA: ENST00000639447.1

GRN-222, Transcript of granulin precursor, human

TSL 2 BASIC

Gene GRN, Length 1,314 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GRN-222	ENST00000639447	ITPK1	Q13572	414 aa		20.06	■□□□□ 0.8
GRN-222	ENST00000639447	AMIGO3	Q86WK7	504 aa		20.06	■□□□□ 0.8
GRN-222	ENST00000639447	AEBP1	Q8IUX7	1158 aa		20.06	■□□□□ 0.8
GRN-222	ENST00000639447	ZNF784	Q8NCA9	323 aa	Predicted RBP	20.06	■□□□□ 0.8
GRN-222	ENST00000639447	ATG3	Q9NT62	314 aa		20.06	■□□□□ 0.8
GRN-222	ENST00000639447	GNPAT	O15228	680 aa		20.05	■□□□□ 0.8
GRN-222	ENST00000639447	AMER1	Q5JTC6	1135 aa	Predicted RBP	20.05	■□□□□ 0.8
GRN-222	ENST00000639447	C1orf141	Q5JVX7	400 aa		20.05	■□□□□ 0.8
GRN-222	ENST00000639447	SULT6B1	Q6IMI4	303 aa		20.03	■□□□□ 0.8
GRN-222	ENST00000639447	CD2AP	Q9Y5K6	639 aa		20.03	■□□□□ 0.8
GRN-222	ENST00000639447	CHD4	Q14839	1912 aa		20.03	■□□□□ 0.8
GRN-222	ENST00000639447	CABP4	P57796	275 aa		20.02	■□□□□ 0.8
GRN-222	ENST00000639447	ZNF831	Q5JPB2	1677 aa		20.02	■□□□□ 0.8
GRN-222	ENST00000639447	IL13	P35225	146 aa		20.02	■□□□□ 0.79
GRN-222	ENST00000639447	SMIM5	Q71RC9	77 aa		20.02	■□□□□ 0.79
GRN-222	ENST00000639447	RBM42	Q9BTD8	480 aa	Known RBP	20.02	■□□□□ 0.79
GRN-222	ENST00000639447	MTHFS	P49914	203 aa		20.01	■□□□□ 0.79
GRN-222	ENST00000639447	GRIN3B	O60391	1043 aa		20	■□□□□ 0.79
GRN-222	ENST00000639447	YBX3	P16989	372 aa	Known RBP eCLIP	20	■□□□□ 0.79	3e-6	■■□□□ 14.4
GRN-222	ENST00000639447	RTCB	Q9Y3I0	505 aa	Known RBP	19.99	■□□□□ 0.79
GRN-222	ENST00000639447	COL5A3	P25940	1745 aa	Predicted RBP	19.99	■□□□□ 0.79
GRN-222	ENST00000639447	CNTNAP4	Q9C0A0	1308 aa		19.97	■□□□□ 0.79
GRN-222	ENST00000639447	CC2D1B	Q5T0F9	858 aa	Known RBP	19.97	■□□□□ 0.79
GRN-222	ENST00000639447	SLC4A9	Q96Q91	983 aa		19.97	■□□□□ 0.79
GRN-222	ENST00000639447	ADRA2B	P18089	450 aa		19.95	■□□□□ 0.78
GRN-222	ENST00000639447	TRAPPC3L	Q5T215	181 aa		19.95	■□□□□ 0.78
GRN-222	ENST00000639447	CIC	Q96RK0	1608 aa	Predicted RBP	19.94	■□□□□ 0.78
GRN-222	ENST00000639447	PTCD1	O75127	700 aa	Known RBP	19.94	■□□□□ 0.78
GRN-222	ENST00000639447	HMOX1	P09601	288 aa		19.94	■□□□□ 0.78
GRN-222	ENST00000639447	AKAP4	Q5JQC9	854 aa		19.94	■□□□□ 0.78
GRN-222	ENST00000639447	RC3H1	Q5TC82	1133 aa	Known RBP	19.94	■□□□□ 0.78
GRN-222	ENST00000639447	MRC1	P22897	1456 aa		19.94	■□□□□ 0.78
GRN-222	ENST00000639447	NPC1L1	Q9UHC9	1359 aa		19.93	■□□□□ 0.78
GRN-222	ENST00000639447	PER1	O15534	1290 aa	Predicted RBP	19.93	■□□□□ 0.78
GRN-222	ENST00000639447	DIAPH1	O60610	1272 aa	Known RBP	19.93	■□□□□ 0.78
GRN-222	ENST00000639447	MMP10	P09238	476 aa		19.93	■□□□□ 0.78
GRN-222	ENST00000639447	NFATC2IP	Q8NCF5	419 aa		19.93	■□□□□ 0.78
GRN-222	ENST00000639447	SCN11A	Q9UI33	1791 aa		19.93	■□□□□ 0.78
GRN-222	ENST00000639447	TJP1	Q07157	1748 aa		19.92	■□□□□ 0.78
GRN-222	ENST00000639447	UTRN	P46939	3433 aa		19.92	■□□□□ 0.78
GRN-222	ENST00000639447	COL3A1	P02461	1466 aa	Predicted RBP	19.91	■□□□□ 0.78
GRN-222	ENST00000639447	RPS6KA4	O75676	772 aa		19.91	■□□□□ 0.78
GRN-222	ENST00000639447	C4A	P0C0L4	1744 aa		19.91	■□□□□ 0.78
GRN-222	ENST00000639447	RFC4	P35249	363 aa		19.9	■□□□□ 0.78
GRN-222	ENST00000639447	NLGN1	Q8N2Q7	840 aa		19.9	■□□□□ 0.78
GRN-222	ENST00000639447	C10orf71	Q711Q0	1435 aa		19.9	■□□□□ 0.78
GRN-222	ENST00000639447	CNGB1	Q14028	1251 aa	Predicted RBP	19.89	■□□□□ 0.77
GRN-222	ENST00000639447	ARHGEF1	Q92888	912 aa	Known RBP	19.89	■□□□□ 0.77
GRN-222	ENST00000639447	SLC52A2	Q9HAB3	445 aa		19.89	■□□□□ 0.77
GRN-222	ENST00000639447	WWC3	Q9ULE0	1092 aa		19.89	■□□□□ 0.77
GRN-222	ENST00000639447	GIGYF1	O75420	1035 aa	Predicted RBP	19.88	■□□□□ 0.77
GRN-222	ENST00000639447	CRKL	P46109	303 aa	Known RBP	19.88	■□□□□ 0.77
GRN-222	ENST00000639447	PXDNL	A1KZ92	1463 aa		19.88	■□□□□ 0.77
GRN-222	ENST00000639447	ADAMTS7	Q9UKP4	1686 aa		19.86	■□□□□ 0.77
GRN-222	ENST00000639447	ATP10D	Q9P241	1426 aa		19.86	■□□□□ 0.77
GRN-222	ENST00000639447	RNMT	O43148	476 aa	Known RBP	19.86	■□□□□ 0.77
GRN-222	ENST00000639447	GYS1	P13807	737 aa		19.86	■□□□□ 0.77
GRN-222	ENST00000639447	MTHFSD	Q2M296	383 aa	Known RBP	19.86	■□□□□ 0.77
GRN-222	ENST00000639447	CCDC87	Q9NVE4	849 aa		19.86	■□□□□ 0.77
GRN-222	ENST00000639447	U2SURP	O15042	1029 aa	Known RBP	19.85	■□□□□ 0.77
GRN-222	ENST00000639447	C1QTNF8	P60827	252 aa		19.85	■□□□□ 0.77
GRN-222	ENST00000639447	LGR6	Q9HBX8	967 aa		19.85	■□□□□ 0.77
GRN-222	ENST00000639447	PARP3	Q9Y6F1	533 aa		19.85	■□□□□ 0.77
GRN-222	ENST00000639447	KCP	Q6ZWJ8	1503 aa		19.85	■□□□□ 0.77
GRN-222	ENST00000639447	USP42	Q9H9J4	1324 aa	Known RBP	19.84	■□□□□ 0.77
GRN-222	ENST00000639447	DNAJC10	Q8IXB1	793 aa		19.84	■□□□□ 0.77
GRN-222	ENST00000639447	KIF13B	Q9NQT8	1826 aa		19.84	■□□□□ 0.77
GRN-222	ENST00000639447	KIAA1551	Q9HCM1	1747 aa		19.84	■□□□□ 0.77
GRN-222	ENST00000639447	ADCY9	O60503	1353 aa		19.84	■□□□□ 0.77
GRN-222	ENST00000639447	MYH14	Q7Z406	1995 aa	Known RBP	19.82	■□□□□ 0.76
GRN-222	ENST00000639447	SENP3-EIF4A1	A0A087X0R7	540 aa		19.82	■□□□□ 0.76
GRN-222	ENST00000639447	TGFB2	P61812	414 aa		19.81	■□□□□ 0.76
GRN-222	ENST00000639447	SLC39A6	Q13433	755 aa		19.81	■□□□□ 0.76
GRN-222	ENST00000639447	GAS2L2	Q8NHY3	880 aa		19.81	■□□□□ 0.76
GRN-222	ENST00000639447	CFAP53	Q96M91	514 aa		19.81	■□□□□ 0.76
GRN-222	ENST00000639447	SRP68	Q9UHB9	627 aa	Known RBP	19.81	■□□□□ 0.76
GRN-222	ENST00000639447	GOLGB1	Q14789	3259 aa	Known RBP	19.81	■□□□□ 0.76
GRN-222	ENST00000639447	INTS5	Q6P9B9	1019 aa	Known RBP	19.8	■□□□□ 0.76
GRN-222	ENST00000639447	SOS1	Q07889	1333 aa	Predicted RBP	19.8	■□□□□ 0.76
GRN-222	ENST00000639447	VIRMA	Q69YN4	1812 aa	Known RBP	19.79	■□□□□ 0.76
GRN-222	ENST00000639447	FKBP8	Q14318	412 aa		19.78	■□□□□ 0.76
GRN-222	ENST00000639447	TTC5	Q8N0Z6	440 aa		19.78	■□□□□ 0.76
GRN-222	ENST00000639447	BCS1L	Q9Y276	419 aa		19.78	■□□□□ 0.76
GRN-222	ENST00000639447	N4BP2	Q86UW6	1770 aa	Predicted RBP	19.78	■□□□□ 0.76
GRN-222	ENST00000639447	UBR2	Q8IWV8	1755 aa		19.78	■□□□□ 0.76
GRN-222	ENST00000639447	COL15A1	P39059	1388 aa		19.78	■□□□□ 0.76
GRN-222	ENST00000639447		A0A0G2JLW4	131 aa		19.77	■□□□□ 0.76
GRN-222	ENST00000639447	ZPR1	O75312	459 aa		19.77	■□□□□ 0.76
GRN-222	ENST00000639447	TEF	Q10587	303 aa		19.77	■□□□□ 0.76
GRN-222	ENST00000639447	GPBP1L1	Q9HC44	474 aa	Predicted RBP	19.77	■□□□□ 0.76
GRN-222	ENST00000639447	CYP19A1	P11511	503 aa	Predicted RBP	19.76	■□□□□ 0.75
GRN-222	ENST00000639447	DPEP1	P16444	411 aa		19.76	■□□□□ 0.75
GRN-222	ENST00000639447	DDR1	Q08345	913 aa		19.76	■□□□□ 0.75
GRN-222	ENST00000639447	VSIG10	Q8N0Z9	540 aa		19.76	■□□□□ 0.75
GRN-222	ENST00000639447	ZBTB1	Q9Y2K1	713 aa		19.76	■□□□□ 0.75
GRN-222	ENST00000639447	GNAT3	A8MTJ3	354 aa		19.76	■□□□□ 0.75
GRN-222	ENST00000639447	ZNF526	Q8TF50	670 aa	Predicted RBP	19.76	■□□□□ 0.75
GRN-222	ENST00000639447	USPL1	Q5W0Q7	1092 aa		19.75	■□□□□ 0.75
GRN-222	ENST00000639447	FCHSD2	O94868	740 aa		19.74	■□□□□ 0.75
GRN-222	ENST00000639447	PRKAR2B	P31323	418 aa		19.74	■□□□□ 0.75

Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms