RNA–Protein interactions for RNA: ENST00000638826.1

SMG7-216, Transcript of SMG7, nonsense mediated mRNA decay factor, humanhuman

TSL 2 BASIC

Gene SMG7, Length 219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG7-216ENST00000638826 AMOTQ4VCS5 1084 aa11.47□□□□□ -0.57
SMG7-216ENST00000638826 PLEKHO1Q53GL0 409 aaPredicted RBP11.47□□□□□ -0.57
SMG7-216ENST00000638826 RC3H1Q5TC82 1133 aaKnown RBP11.47□□□□□ -0.57
SMG7-216ENST00000638826 HSPA6P17066 643 aa11.46□□□□□ -0.57
SMG7-216ENST00000638826 SMIM5Q71RC9 77 aa11.46□□□□□ -0.57
SMG7-216ENST00000638826 ZNF526Q8TF50 670 aaPredicted RBP11.46□□□□□ -0.57
SMG7-216ENST00000638826 POLR3GLQ9BT43 218 aa11.46□□□□□ -0.57
SMG7-216ENST00000638826 CCDC87Q9NVE4 849 aa11.46□□□□□ -0.57
SMG7-216ENST00000638826 RGPD2P0DJD1 1756 aa11.46□□□□□ -0.58
SMG7-216ENST00000638826 PKD1L3Q7Z443 1732 aa11.46□□□□□ -0.58
SMG7-216ENST00000638826 CNTNAP4Q9C0A0 1308 aa11.45□□□□□ -0.58
SMG7-216ENST00000638826 RFC4P35249 363 aa11.45□□□□□ -0.58
SMG7-216ENST00000638826 TNNT2P45379 298 aaPredicted RBP11.45□□□□□ -0.58
SMG7-216ENST00000638826 CABP4P57796 275 aa11.45□□□□□ -0.58
SMG7-216ENST00000638826 IFFO2Q5TF58 517 aa11.45□□□□□ -0.58
SMG7-216ENST00000638826 RBM42Q9BTD8 480 aaKnown RBP11.45□□□□□ -0.58
SMG7-216ENST00000638826 KIF20BQ96Q89 1820 aa11.44□□□□□ -0.58
SMG7-216ENST00000638826 KDRP35968 1356 aa11.44□□□□□ -0.58
SMG7-216ENST00000638826 ZNF530Q6P9A1 599 aaPredicted RBP11.44□□□□□ -0.58
SMG7-216ENST00000638826 WWC3Q9ULE0 1092 aa11.44□□□□□ -0.58
SMG7-216ENST00000638826 RPS6KA4O75676 772 aa11.43□□□□□ -0.58
SMG7-216ENST00000638826 MTHFSP49914 203 aa11.43□□□□□ -0.58
SMG7-216ENST00000638826 EIF4G2P78344 907 aaKnown RBP eCLIP11.43□□□□□ -0.585e-7■■□□□ 11.4
SMG7-216ENST00000638826 C1orf141Q5JVX7 400 aa11.43□□□□□ -0.58
SMG7-216ENST00000638826 ARHGEF1Q92888 912 aaKnown RBP11.43□□□□□ -0.58
SMG7-216ENST00000638826 BCS1LQ9Y276 419 aa11.43□□□□□ -0.58
SMG7-216ENST00000638826 PARP3Q9Y6F1 533 aa11.43□□□□□ -0.58
SMG7-216ENST00000638826 TOGARAM1Q9Y4F4 1720 aa11.43□□□□□ -0.58
SMG7-216ENST00000638826 PANK3Q9H999 370 aa11.42□□□□□ -0.58
SMG7-216ENST00000638826 PXDNLA1KZ92 1463 aa11.42□□□□□ -0.58
SMG7-216ENST00000638826 ANKRD26Q9UPS8 1709 aa11.41□□□□□ -0.58
SMG7-216ENST00000638826 A0A0G2JLW4 131 aa11.41□□□□□ -0.58
SMG7-216ENST00000638826 KIF3CO14782 793 aa11.41□□□□□ -0.58
SMG7-216ENST00000638826 FCHSD2O94868 740 aa11.41□□□□□ -0.58
SMG7-216ENST00000638826 GYS1P13807 737 aa11.41□□□□□ -0.58
SMG7-216ENST00000638826 MORC1Q86VD1 984 aa11.41□□□□□ -0.58
SMG7-216ENST00000638826 SLC4A9Q96Q91 983 aa11.41□□□□□ -0.58
SMG7-216ENST00000638826 C10orf71Q711Q0 1435 aa11.41□□□□□ -0.58
SMG7-216ENST00000638826 TOMM70O94826 608 aa11.4□□□□□ -0.58
SMG7-216ENST00000638826 APLP1P51693 650 aa11.4□□□□□ -0.58
SMG7-216ENST00000638826 ARHGAP27Q6ZUM4 889 aa11.4□□□□□ -0.58
SMG7-216ENST00000638826 PTCD1O75127 700 aaKnown RBP11.39□□□□□ -0.59
SMG7-216ENST00000638826 DPEP1P16444 411 aa11.39□□□□□ -0.59
SMG7-216ENST00000638826 PIM2Q9P1W9 311 aa11.39□□□□□ -0.59
SMG7-216ENST00000638826 KNSTRNQ9Y448 316 aa11.39□□□□□ -0.59
SMG7-216ENST00000638826 TAF1LQ8IZX4 1826 aa11.39□□□□□ -0.59
SMG7-216ENST00000638826 CICQ96RK0 1608 aaPredicted RBP11.38□□□□□ -0.59
SMG7-216ENST00000638826 UBR3Q6ZT12 1888 aa11.38□□□□□ -0.59
SMG7-216ENST00000638826 KDM6AO15550 1401 aaPredicted RBP11.38□□□□□ -0.59
SMG7-216ENST00000638826 MAP2P11137 1827 aaKnown RBP11.38□□□□□ -0.59
SMG7-216ENST00000638826 CRKLP46109 303 aaKnown RBP11.38□□□□□ -0.59
SMG7-216ENST00000638826 SULT6B1Q6IMI4 303 aa11.38□□□□□ -0.59
SMG7-216ENST00000638826 NFATC2IPQ8NCF5 419 aa11.38□□□□□ -0.59
SMG7-216ENST00000638826 HSPA5P11021 654 aaKnown RBP11.37□□□□□ -0.59
SMG7-216ENST00000638826 DALRD3Q5D0E6 543 aaKnown RBP11.37□□□□□ -0.59
SMG7-216ENST00000638826 AEBP1Q8IUX7 1158 aa11.37□□□□□ -0.59
SMG7-216ENST00000638826 C16orf71Q8IYS4 520 aaPredicted RBP11.37□□□□□ -0.59
SMG7-216ENST00000638826 PCGF6Q9BYE7 350 aa11.37□□□□□ -0.59
SMG7-216ENST00000638826 ITGB4P16144 1822 aa11.37□□□□□ -0.59
SMG7-216ENST00000638826 USP42Q9H9J4 1324 aaKnown RBP11.36□□□□□ -0.59
SMG7-216ENST00000638826 ZPR1O75312 459 aa11.36□□□□□ -0.59
SMG7-216ENST00000638826 AKAP4Q5JQC9 854 aa11.36□□□□□ -0.59
SMG7-216ENST00000638826 C9orf131Q5VYM1 1079 aa11.36□□□□□ -0.59
SMG7-216ENST00000638826 KDM2BQ8NHM5 1336 aa11.35□□□□□ -0.59
SMG7-216ENST00000638826 KCNA3P22001 575 aa11.35□□□□□ -0.59
SMG7-216ENST00000638826 IL13P35225 146 aa11.35□□□□□ -0.59
SMG7-216ENST00000638826 FKBP8Q14318 412 aa11.35□□□□□ -0.59
SMG7-216ENST00000638826 RBM46Q8TBY0 533 aaKnown RBP11.35□□□□□ -0.59
SMG7-216ENST00000638826 ZNF831Q5JPB2 1677 aa11.35□□□□□ -0.59
SMG7-216ENST00000638826 INTS5Q6P9B9 1019 aaKnown RBP11.34□□□□□ -0.59
SMG7-216ENST00000638826 SLC52A2Q9HAB3 445 aa11.34□□□□□ -0.59
SMG7-216ENST00000638826 SRP68Q9UHB9 627 aaKnown RBP11.34□□□□□ -0.59
SMG7-216ENST00000638826 TM4SF1P30408 202 aa11.33□□□□□ -0.6
SMG7-216ENST00000638826 DDR1Q08345 913 aa11.33□□□□□ -0.6
SMG7-216ENST00000638826 FSTL1Q12841 308 aa11.33□□□□□ -0.6
SMG7-216ENST00000638826 NMRK2Q9NPI5 230 aa11.33□□□□□ -0.6
SMG7-216ENST00000638826 RNF181Q9P0P0 153 aa11.33□□□□□ -0.6
SMG7-216ENST00000638826 C4AP0C0L4 1744 aa11.32□□□□□ -0.6
SMG7-216ENST00000638826 POLRMTO00411 1230 aaKnown RBP11.32□□□□□ -0.6
SMG7-216ENST00000638826 DNAJC10Q8IXB1 793 aa11.32□□□□□ -0.6
SMG7-216ENST00000638826 VSIG10Q8N0Z9 540 aa11.32□□□□□ -0.6
SMG7-216ENST00000638826 SOS1Q07889 1333 aaPredicted RBP11.32□□□□□ -0.6
SMG7-216ENST00000638826 ZC3H4Q9UPT8 1303 aaKnown RBP11.32□□□□□ -0.6
SMG7-216ENST00000638826 CYP19A1P11511 503 aaPredicted RBP11.31□□□□□ -0.6
SMG7-216ENST00000638826 AMER1Q5JTC6 1135 aaPredicted RBP11.31□□□□□ -0.6
SMG7-216ENST00000638826 USPL1Q5W0Q7 1092 aa11.31□□□□□ -0.6
SMG7-216ENST00000638826 NARFQ9UHQ1 456 aa11.31□□□□□ -0.6
SMG7-216ENST00000638826 RNMTO43148 476 aaKnown RBP11.3□□□□□ -0.6
SMG7-216ENST00000638826 STARD3NLO95772 234 aa11.3□□□□□ -0.6
SMG7-216ENST00000638826 CHRNA5P30532 468 aa11.3□□□□□ -0.6
SMG7-216ENST00000638826 DNAJC5GQ8N7S2 189 aa11.3□□□□□ -0.6
SMG7-216ENST00000638826 A0A087WZG4 1122 aa11.29□□□□□ -0.6
SMG7-216ENST00000638826 DIAPH1O60610 1272 aaKnown RBP11.29□□□□□ -0.6
SMG7-216ENST00000638826 TTC5Q8N0Z6 440 aa11.29□□□□□ -0.6
SMG7-216ENST00000638826 LGR6Q9HBX8 967 aa11.29□□□□□ -0.6
SMG7-216ENST00000638826 PDZRN3Q9UPQ7 1066 aa11.29□□□□□ -0.6
SMG7-216ENST00000638826 KIF13BQ9NQT8 1826 aa11.29□□□□□ -0.6
SMG7-216ENST00000638826 COL15A1P39059 1388 aa11.28□□□□□ -0.6
SMG7-216ENST00000638826 SERPINB2P05120 415 aa11.28□□□□□ -0.6
SMG7-216ENST00000638826 HMOX1P09601 288 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms