RNA–Protein interactions for RNA: ENST00000634772.1

SMARCA2-228, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5

Gene SMARCA2, Length 810 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-228ENST00000634772 SYTL4Q96C24 671 aaPredicted RBP12.97□□□□□ -0.33
SMARCA2-228ENST00000634772 DIAPH1O60610 1272 aaKnown RBP12.96□□□□□ -0.33
SMARCA2-228ENST00000634772 COL23A1Q86Y22 540 aaPredicted RBP12.96□□□□□ -0.33
SMARCA2-228ENST00000634772 NGEFQ8N5V2 710 aa12.95□□□□□ -0.34
SMARCA2-228ENST00000634772 ZCRB1Q8TBF4 217 aaKnown RBP12.95□□□□□ -0.34
SMARCA2-228ENST00000634772 CCNL1Q9UK58 526 aaPredicted RBP12.95□□□□□ -0.34
SMARCA2-228ENST00000634772 RGPD2P0DJD1 1756 aa12.94□□□□□ -0.34
SMARCA2-228ENST00000634772 MSL1Q68DK7 614 aa12.94□□□□□ -0.34
SMARCA2-228ENST00000634772 PIP4P2Q8N4L2 257 aa12.94□□□□□ -0.34
SMARCA2-228ENST00000634772 PNNQ9H307 717 aaKnown RBP12.94□□□□□ -0.34
SMARCA2-228ENST00000634772 KIF24Q5T7B8 1368 aa12.94□□□□□ -0.34
SMARCA2-228ENST00000634772 NBPF6Q5VWK0 638 aa12.93□□□□□ -0.34
SMARCA2-228ENST00000634772 USHBP1Q8N6Y0 703 aa12.93□□□□□ -0.34
SMARCA2-228ENST00000634772 NBPF4Q96M43 638 aa12.93□□□□□ -0.34
SMARCA2-228ENST00000634772 EMILIN1Q9Y6C2 1016 aa12.93□□□□□ -0.34
SMARCA2-228ENST00000634772 CEP350Q5VT06 3117 aa12.93□□□□□ -0.34
SMARCA2-228ENST00000634772 SMG6Q86US8 1419 aaKnown RBP12.93□□□□□ -0.34
SMARCA2-228ENST00000634772 ZBED9Q6R2W3 1325 aa12.92□□□□□ -0.34
SMARCA2-228ENST00000634772 PPM1GO15355 546 aaPredicted RBP12.92□□□□□ -0.34
SMARCA2-228ENST00000634772 IL13P35225 146 aa12.92□□□□□ -0.34
SMARCA2-228ENST00000634772 RRS1Q15050 365 aaKnown RBP12.92□□□□□ -0.34
SMARCA2-228ENST00000634772 AMIGO3Q86WK7 504 aa12.92□□□□□ -0.34
SMARCA2-228ENST00000634772 ATP10DQ9P241 1426 aa12.92□□□□□ -0.34
SMARCA2-228ENST00000634772 ANKRD26Q9UPS8 1709 aa12.91□□□□□ -0.34
SMARCA2-228ENST00000634772 FCHSD2O94868 740 aa12.91□□□□□ -0.34
SMARCA2-228ENST00000634772 U2AF1L5P0DN76 240 aaPredicted RBP12.91□□□□□ -0.34
SMARCA2-228ENST00000634772 AMPHP49418 695 aa12.91□□□□□ -0.34
SMARCA2-228ENST00000634772 U2AF1Q01081 240 aaKnown RBP eCLIP12.91□□□□□ -0.34
SMARCA2-228ENST00000634772 SP7Q8TDD2 431 aaPredicted RBP12.91□□□□□ -0.34
SMARCA2-228ENST00000634772 RUNDC1Q96C34 613 aa12.91□□□□□ -0.34
SMARCA2-228ENST00000634772 KAT6BQ8WYB5 2073 aa12.91□□□□□ -0.34
SMARCA2-228ENST00000634772 KIF20BQ96Q89 1820 aa12.9□□□□□ -0.34
SMARCA2-228ENST00000634772 PITPNM1O00562 1244 aa12.9□□□□□ -0.34
SMARCA2-228ENST00000634772 GRIN3BO60391 1043 aa12.9□□□□□ -0.34
SMARCA2-228ENST00000634772 RTL1A6NKG5 1358 aa12.9□□□□□ -0.34
SMARCA2-228ENST00000634772 ADCY9O60503 1353 aa12.9□□□□□ -0.34
SMARCA2-228ENST00000634772 SMIM5Q71RC9 77 aa12.89□□□□□ -0.35
SMARCA2-228ENST00000634772 C5P01031 1676 aa12.89□□□□□ -0.35
SMARCA2-228ENST00000634772 TOGARAM1Q9Y4F4 1720 aa12.88□□□□□ -0.35
SMARCA2-228ENST00000634772 U2SURPO15042 1029 aaKnown RBP12.88□□□□□ -0.35
SMARCA2-228ENST00000634772 HSP90AB2PQ58FF8 381 aa12.88□□□□□ -0.35
SMARCA2-228ENST00000634772 COL3A1P02461 1466 aaPredicted RBP12.88□□□□□ -0.35
SMARCA2-228ENST00000634772 PALLDQ8WX93 1383 aa12.87□□□□□ -0.35
SMARCA2-228ENST00000634772 EIF4A2Q14240 407 aaKnown RBP12.87□□□□□ -0.35
SMARCA2-228ENST00000634772 PLEKHF1Q96S99 279 aa12.87□□□□□ -0.35
SMARCA2-228ENST00000634772 CD2APQ9Y5K6 639 aa12.87□□□□□ -0.35
SMARCA2-228ENST00000634772 FLT4P35916 1363 aa12.86□□□□□ -0.35
SMARCA2-228ENST00000634772 APAF1O14727 1248 aa12.86□□□□□ -0.35
SMARCA2-228ENST00000634772 CYP27B1O15528 508 aa12.86□□□□□ -0.35
SMARCA2-228ENST00000634772 HMGB2P26583 209 aaKnown RBP12.86□□□□□ -0.35
SMARCA2-228ENST00000634772 RAPGEF4Q8WZA2 1011 aa12.85□□□□□ -0.35
SMARCA2-228ENST00000634772 TAF1LQ8IZX4 1826 aa12.85□□□□□ -0.35
SMARCA2-228ENST00000634772 C4BP0C0L5 1744 aa12.85□□□□□ -0.35
SMARCA2-228ENST00000634772 ATXN8OSP0DMR3 200 aa12.84□□□□□ -0.35
SMARCA2-228ENST00000634772 TATP17735 454 aaPredicted RBP12.84□□□□□ -0.35
SMARCA2-228ENST00000634772 CCDC27Q2M243 656 aa12.84□□□□□ -0.35
SMARCA2-228ENST00000634772 MPRIPQ6WCQ1 1025 aa12.84□□□□□ -0.35
SMARCA2-228ENST00000634772 CCDC146Q8IYE0 955 aa12.84□□□□□ -0.35
SMARCA2-228ENST00000634772 RSPH6AQ9H0K4 717 aa12.84□□□□□ -0.35
SMARCA2-228ENST00000634772 WWC3Q9ULE0 1092 aa12.84□□□□□ -0.35
SMARCA2-228ENST00000634772 PCDH11XQ9BZA7 1347 aa12.84□□□□□ -0.35
SMARCA2-228ENST00000634772 PCDH11YQ9BZA8 1340 aa12.84□□□□□ -0.35
SMARCA2-228ENST00000634772 NEFMP07197 916 aa12.83□□□□□ -0.36
SMARCA2-228ENST00000634772 ZNF526Q8TF50 670 aaPredicted RBP12.83□□□□□ -0.36
SMARCA2-228ENST00000634772 GPBP1L1Q9HC44 474 aaPredicted RBP12.83□□□□□ -0.36
SMARCA2-228ENST00000634772 IGSF1Q8N6C5 1336 aa12.83□□□□□ -0.36
SMARCA2-228ENST00000634772 NCAPD2Q15021 1401 aa12.82□□□□□ -0.36
SMARCA2-228ENST00000634772 HAX1O00165 279 aa12.82□□□□□ -0.36
SMARCA2-228ENST00000634772 PHF14O94880 888 aa12.82□□□□□ -0.36
SMARCA2-228ENST00000634772 FLAD1Q8NFF5 587 aa12.82□□□□□ -0.36
SMARCA2-228ENST00000634772 PIGBQ92521 554 aa12.82□□□□□ -0.36
SMARCA2-228ENST00000634772 MAP2P11137 1827 aaKnown RBP12.82□□□□□ -0.36
SMARCA2-228ENST00000634772 ZNF521Q96K83 1311 aa12.82□□□□□ -0.36
SMARCA2-228ENST00000634772 UBR3Q6ZT12 1888 aa12.81□□□□□ -0.36
SMARCA2-228ENST00000634772 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.81□□□□□ -0.36
SMARCA2-228ENST00000634772 HSPA6P17066 643 aa12.81□□□□□ -0.36
SMARCA2-228ENST00000634772 LINC00116Q8NCU8 138 aa12.81□□□□□ -0.36
SMARCA2-228ENST00000634772 EYA1Q99502 592 aa12.81□□□□□ -0.36
SMARCA2-228ENST00000634772 PKD1L3Q7Z443 1732 aa12.81□□□□□ -0.36
SMARCA2-228ENST00000634772 KIF3CO14782 793 aa12.8□□□□□ -0.36
SMARCA2-228ENST00000634772 PRKAR2BP31323 418 aa12.8□□□□□ -0.36
SMARCA2-228ENST00000634772 TMPOP42166 694 aaKnown RBP12.8□□□□□ -0.36
SMARCA2-228ENST00000634772 FXR2P51116 673 aaKnown RBP eCLIP12.8□□□□□ -0.36
SMARCA2-228ENST00000634772 NKX1-1Q15270 411 aaPredicted RBP12.8□□□□□ -0.36
SMARCA2-228ENST00000634772 SULT6B1Q6IMI4 303 aa12.8□□□□□ -0.36
SMARCA2-228ENST00000634772 WDR63Q8IWG1 891 aa12.8□□□□□ -0.36
SMARCA2-228ENST00000634772 AK7Q96M32 723 aa12.8□□□□□ -0.36
SMARCA2-228ENST00000634772 ITGB4P16144 1822 aa12.8□□□□□ -0.36
SMARCA2-228ENST00000634772 MAPK8IP3Q9UPT6 1336 aa12.8□□□□□ -0.36
SMARCA2-228ENST00000634772 HMOX1P09601 288 aa12.79□□□□□ -0.36
SMARCA2-228ENST00000634772 GOLGA2Q08379 1002 aa12.79□□□□□ -0.36
SMARCA2-228ENST00000634772 ITPK1Q13572 414 aa12.79□□□□□ -0.36
SMARCA2-228ENST00000634772 WWC1Q8IX03 1113 aa12.79□□□□□ -0.36
SMARCA2-228ENST00000634772 SMARCC1Q92922 1105 aaPredicted RBP12.79□□□□□ -0.36
SMARCA2-228ENST00000634772 SALL2Q9Y467 1007 aaPredicted RBP12.79□□□□□ -0.36
SMARCA2-228ENST00000634772 CICQ96RK0 1608 aaPredicted RBP12.78□□□□□ -0.36
SMARCA2-228ENST00000634772 LOC102724428A0A0B4J2F2 783 aa12.78□□□□□ -0.36
SMARCA2-228ENST00000634772 SIK1P57059 783 aa12.78□□□□□ -0.36
SMARCA2-228ENST00000634772 TRMT2AQ8IZ69 625 aaKnown RBP12.78□□□□□ -0.36
SMARCA2-228ENST00000634772 PHACTR3Q96KR7 559 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms