RNA–Protein interactions for RNA: ENST00000629912.1

NEK3-211, Transcript of NIMA related kinase 3, humanhuman

TSL 5 BASIC

Gene NEK3, Length 141 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-211ENST00000629912 SLAIN2Q9P270 581 aa6.99□□□□□ -1.29
NEK3-211ENST00000629912 KDM3BQ7LBC6 1761 aa6.99□□□□□ -1.29
NEK3-211ENST00000629912 TNS3Q68CZ2 1445 aa6.99□□□□□ -1.29
NEK3-211ENST00000629912 ADAMTS7Q9UKP4 1686 aa6.99□□□□□ -1.29
NEK3-211ENST00000629912 ERBB3P21860 1342 aa6.99□□□□□ -1.29
NEK3-211ENST00000629912 SOS2Q07890 1332 aaPredicted RBP6.99□□□□□ -1.29
NEK3-211ENST00000629912 CRYBG1Q9Y4K1 1723 aa6.98□□□□□ -1.29
NEK3-211ENST00000629912 HEG1Q9ULI3 1381 aa6.98□□□□□ -1.29
NEK3-211ENST00000629912 FAM208AQ9UK61 1670 aaKnown RBP6.98□□□□□ -1.29
NEK3-211ENST00000629912 BTBD11A6QL63 1104 aa6.98□□□□□ -1.29
NEK3-211ENST00000629912 TEFQ10587 303 aa6.98□□□□□ -1.29
NEK3-211ENST00000629912 SIPA1L3O60292 1781 aaPredicted RBP6.97□□□□□ -1.29
NEK3-211ENST00000629912 TATP17735 454 aaPredicted RBP6.97□□□□□ -1.29
NEK3-211ENST00000629912 FLIIQ13045 1269 aa6.97□□□□□ -1.29
NEK3-211ENST00000629912 ANKRD45Q5TZF3 282 aa6.97□□□□□ -1.29
NEK3-211ENST00000629912 MPRIPQ6WCQ1 1025 aa6.97□□□□□ -1.29
NEK3-211ENST00000629912 NPM2Q86SE8 214 aaKnown RBP6.97□□□□□ -1.29
NEK3-211ENST00000629912 RAPGEF4Q8WZA2 1011 aa6.97□□□□□ -1.29
NEK3-211ENST00000629912 DDX17Q92841 729 aaKnown RBP6.97□□□□□ -1.29
NEK3-211ENST00000629912 SPG7Q9UQ90 795 aa6.97□□□□□ -1.29
NEK3-211ENST00000629912 N4BP2Q86UW6 1770 aaPredicted RBP6.96□□□□□ -1.3
NEK3-211ENST00000629912 SCN11AQ9UI33 1791 aa6.96□□□□□ -1.3
NEK3-211ENST00000629912 SEC24BO95487 1268 aa6.96□□□□□ -1.3
NEK3-211ENST00000629912 GNAI3P08754 354 aa6.96□□□□□ -1.3
NEK3-211ENST00000629912 HDGFL1Q5TGJ6 251 aa6.96□□□□□ -1.3
NEK3-211ENST00000629912 CEP85Q6P2H3 762 aa6.96□□□□□ -1.3
NEK3-211ENST00000629912 ERICH6Q7L0X2 663 aa6.96□□□□□ -1.3
NEK3-211ENST00000629912 C1orf115Q9H7X2 142 aa6.96□□□□□ -1.3
NEK3-211ENST00000629912 NLRP2Q9NX02 1062 aa6.96□□□□□ -1.3
NEK3-211ENST00000629912 ATP10DQ9P241 1426 aa6.95□□□□□ -1.3
NEK3-211ENST00000629912 F6X3S4 739 aa6.95□□□□□ -1.3
NEK3-211ENST00000629912 KCNQ3O43525 872 aa6.95□□□□□ -1.3
NEK3-211ENST00000629912 EIF5BO60841 1220 aaKnown RBP6.95□□□□□ -1.3
NEK3-211ENST00000629912 HMMRO75330 724 aa6.95□□□□□ -1.3
NEK3-211ENST00000629912 GIGYF1O75420 1035 aaPredicted RBP6.95□□□□□ -1.3
NEK3-211ENST00000629912 GNAI2P04899 355 aa6.95□□□□□ -1.3
NEK3-211ENST00000629912 HSP90AB1P08238 724 aaKnown RBP6.95□□□□□ -1.3
NEK3-211ENST00000629912 PHKG2P15735 406 aa6.95□□□□□ -1.3
NEK3-211ENST00000629912 ATP8B2P98198 1209 aa6.95□□□□□ -1.3
NEK3-211ENST00000629912 FKBP5Q13451 457 aaPredicted RBP6.95□□□□□ -1.3
NEK3-211ENST00000629912 BMP2KLQ5H9B9 411 aa6.95□□□□□ -1.3
NEK3-211ENST00000629912 IFNL2Q8IZJ0 200 aa6.95□□□□□ -1.3
NEK3-211ENST00000629912 CABLES1Q8TDN4 633 aa6.95□□□□□ -1.3
NEK3-211ENST00000629912 MEIS3Q99687 375 aa6.95□□□□□ -1.3
NEK3-211ENST00000629912 LNPKQ9C0E8 428 aa6.95□□□□□ -1.3
NEK3-211ENST00000629912 PXDNLA1KZ92 1463 aa6.95□□□□□ -1.3
NEK3-211ENST00000629912 ZNF335Q9H4Z2 1342 aaPredicted RBP6.95□□□□□ -1.3
NEK3-211ENST00000629912 MYT1Q01538 1121 aa6.94□□□□□ -1.3
NEK3-211ENST00000629912 SLC4A10Q6U841 1118 aa6.94□□□□□ -1.3
NEK3-211ENST00000629912 DCAF5Q96JK2 942 aa6.94□□□□□ -1.3
NEK3-211ENST00000629912 USP44Q9H0E7 712 aa6.94□□□□□ -1.3
NEK3-211ENST00000629912 UPF2Q9HAU5 1272 aaKnown RBP6.94□□□□□ -1.3
NEK3-211ENST00000629912 DBF4Q9UBU7 674 aaPredicted RBP6.94□□□□□ -1.3
NEK3-211ENST00000629912 IBTKQ9P2D0 1353 aaPredicted RBP6.94□□□□□ -1.3
NEK3-211ENST00000629912 PLEKHG5O94827 1062 aa6.93□□□□□ -1.3
NEK3-211ENST00000629912 CSB-PGBD3P0DP91 1061 aa6.93□□□□□ -1.3
NEK3-211ENST00000629912 EIF2S2P20042 333 aaKnown RBP6.93□□□□□ -1.3
NEK3-211ENST00000629912 CHRNA2Q15822 529 aa6.93□□□□□ -1.3
NEK3-211ENST00000629912 PLEKHM2Q8IWE5 1019 aa6.93□□□□□ -1.3
NEK3-211ENST00000629912 TBC1D32Q96NH3 1257 aa6.93□□□□□ -1.3
NEK3-211ENST00000629912 CARD10Q9BWT7 1032 aa6.93□□□□□ -1.3
NEK3-211ENST00000629912 PHAXQ9H814 394 aaKnown RBP6.93□□□□□ -1.3
NEK3-211ENST00000629912 SLC52A2Q9HAB3 445 aa6.93□□□□□ -1.3
NEK3-211ENST00000629912 HYPKQ9NX55 129 aa6.93□□□□□ -1.3
NEK3-211ENST00000629912 WDR17Q8IZU2 1322 aa6.93□□□□□ -1.3
NEK3-211ENST00000629912 PKD1L3Q7Z443 1732 aa6.93□□□□□ -1.3
NEK3-211ENST00000629912 NHSL1Q5SYE7 1610 aa6.92□□□□□ -1.3
NEK3-211ENST00000629912 CYP27B1O15528 508 aa6.92□□□□□ -1.3
NEK3-211ENST00000629912 ALDH1L1O75891 902 aa6.92□□□□□ -1.3
NEK3-211ENST00000629912 NKX1-1Q15270 411 aaPredicted RBP6.92□□□□□ -1.3
NEK3-211ENST00000629912 BEND3Q5T5X7 828 aa6.92□□□□□ -1.3
NEK3-211ENST00000629912 ZNF790Q6PG37 636 aa6.92□□□□□ -1.3
NEK3-211ENST00000629912 KSR2Q6VAB6 950 aa6.92□□□□□ -1.3
NEK3-211ENST00000629912 NFATC2IPQ8NCF5 419 aa6.92□□□□□ -1.3
NEK3-211ENST00000629912 DNAAF4Q8WXU2 420 aa6.92□□□□□ -1.3
NEK3-211ENST00000629912 NECTIN2Q92692 538 aa6.92□□□□□ -1.3
NEK3-211ENST00000629912 SRCIN1Q9C0H9 1055 aa6.92□□□□□ -1.3
NEK3-211ENST00000629912 OSBPL3Q9H4L5 887 aa6.92□□□□□ -1.3
NEK3-211ENST00000629912 DDX21Q9NR30 783 aaKnown RBP eCLIP6.92□□□□□ -1.3
NEK3-211ENST00000629912 CHPF2Q9P2E5 772 aa6.92□□□□□ -1.3
NEK3-211ENST00000629912 HDAC5Q9UQL6 1122 aa6.92□□□□□ -1.3
NEK3-211ENST00000629912 KDM6AO15550 1401 aaPredicted RBP6.92□□□□□ -1.3
NEK3-211ENST00000629912 MEGF6O75095 1541 aa6.91□□□□□ -1.3
NEK3-211ENST00000629912 PI4KAP2A4QPH2 592 aa6.91□□□□□ -1.3
NEK3-211ENST00000629912 ERVV-2B6SEH9 535 aa6.91□□□□□ -1.3
NEK3-211ENST00000629912 UBTFL1P0CB47 393 aaPredicted RBP6.91□□□□□ -1.3
NEK3-211ENST00000629912 POLA2Q14181 598 aa6.91□□□□□ -1.3
NEK3-211ENST00000629912 PDIA6Q15084 440 aa6.91□□□□□ -1.3
NEK3-211ENST00000629912 PI4KAP1Q8N8J0 262 aa6.91□□□□□ -1.3
NEK3-211ENST00000629912 ZCRB1Q8TBF4 217 aaKnown RBP6.91□□□□□ -1.3
NEK3-211ENST00000629912 SSH3Q8TE77 659 aa6.91□□□□□ -1.3
NEK3-211ENST00000629912 C22orf23Q9BZE7 217 aa6.91□□□□□ -1.3
NEK3-211ENST00000629912 PRDM11Q9NQV5 511 aa6.91□□□□□ -1.3
NEK3-211ENST00000629912 DAXXQ9UER7 740 aaPredicted RBP6.91□□□□□ -1.3
NEK3-211ENST00000629912 MRC1P22897 1456 aa6.91□□□□□ -1.3
NEK3-211ENST00000629912 RAB11FIP3O75154 756 aa6.9□□□□□ -1.3
NEK3-211ENST00000629912 DDX58O95786 925 aaKnown RBP6.9□□□□□ -1.3
NEK3-211ENST00000629912 SNRPA1P09661 255 aaKnown RBP6.9□□□□□ -1.3
NEK3-211ENST00000629912 RBM25P49756 843 aaKnown RBP6.9□□□□□ -1.3
NEK3-211ENST00000629912 BECN1Q14457 450 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms