RNA–Protein interactions for RNA: ENST00000629293.1

LINC00550-201, long intergenic non-protein coding RNA 550, humanhuman

TSL 1 (best) BASIC

Gene LINC00550, Length 3,434 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00550-201ENST00000629293 SH3D19Q5HYK7 790 aa6.76□□□□□ -1.33
LINC00550-201ENST00000629293 ADGRB2O60241 1585 aa6.76□□□□□ -1.33
LINC00550-201ENST00000629293 POLR3AO14802 1390 aaPredicted RBP6.76□□□□□ -1.33
LINC00550-201ENST00000629293 EXOC5O00471 708 aa6.76□□□□□ -1.33
LINC00550-201ENST00000629293 FCHSD2O94868 740 aa6.76□□□□□ -1.33
LINC00550-201ENST00000629293 MARCH10Q8NA82 808 aaPredicted RBP6.76□□□□□ -1.33
LINC00550-201ENST00000629293 L3MBTL2Q969R5 705 aa6.76□□□□□ -1.33
LINC00550-201ENST00000629293 THRAP3Q9Y2W1 955 aaKnown RBP6.76□□□□□ -1.33
LINC00550-201ENST00000629293 LTV1Q96GA3 475 aaPredicted RBP6.76□□□□□ -1.33
LINC00550-201ENST00000629293 STK32BQ9NY57 414 aa6.76□□□□□ -1.33
LINC00550-201ENST00000629293 USP19O94966 1318 aa6.76□□□□□ -1.33
LINC00550-201ENST00000629293 PARD3Q8TEW0 1356 aa6.76□□□□□ -1.33
LINC00550-201ENST00000629293 OVOS2A0A0G2JMS6 1433 aa6.75□□□□□ -1.33
LINC00550-201ENST00000629293 OVOS2A0A0J9YW53 1432 aa6.75□□□□□ -1.33
LINC00550-201ENST00000629293 DISP2A7MBM2 1401 aa6.75□□□□□ -1.33
LINC00550-201ENST00000629293 OVOS2Q6IE36 1432 aa6.75□□□□□ -1.33
LINC00550-201ENST00000629293 CEP350Q5VT06 3117 aa6.75□□□□□ -1.33
LINC00550-201ENST00000629293 SYTL4Q96C24 671 aaPredicted RBP6.75□□□□□ -1.33
LINC00550-201ENST00000629293 EVC2Q86UK5 1308 aa6.75□□□□□ -1.33
LINC00550-201ENST00000629293 RGPD1P0DJD0 1748 aa6.75□□□□□ -1.33
LINC00550-201ENST00000629293 CRB1P82279 1406 aa6.75□□□□□ -1.33
LINC00550-201ENST00000629293 LRP5O75197 1615 aa6.75□□□□□ -1.33
LINC00550-201ENST00000629293 GOLGA2Q08379 1002 aa6.75□□□□□ -1.33
LINC00550-201ENST00000629293 COL5A2P05997 1499 aaPredicted RBP6.75□□□□□ -1.33
LINC00550-201ENST00000629293 C19orf67A6NJJ6 358 aa6.75□□□□□ -1.33
LINC00550-201ENST00000629293 TXNRD1Q16881 649 aa6.75□□□□□ -1.33
LINC00550-201ENST00000629293 CHRDL2Q6WN34 429 aa6.75□□□□□ -1.33
LINC00550-201ENST00000629293 WDR17Q8IZU2 1322 aa6.74□□□□□ -1.33
LINC00550-201ENST00000629293 CPDO75976 1380 aa6.74□□□□□ -1.33
LINC00550-201ENST00000629293 THSD7AQ9UPZ6 1657 aa6.74□□□□□ -1.33
LINC00550-201ENST00000629293 FHDC1Q9C0D6 1143 aaPredicted RBP6.74□□□□□ -1.33
LINC00550-201ENST00000629293 TRIM35Q9UPQ4 493 aa6.74□□□□□ -1.33
LINC00550-201ENST00000629293 TTC21BQ7Z4L5 1316 aa6.73□□□□□ -1.33
LINC00550-201ENST00000629293 KCNQ4P56696 695 aa6.73□□□□□ -1.33
LINC00550-201ENST00000629293 DDX54Q8TDD1 881 aaKnown RBP6.73□□□□□ -1.33
LINC00550-201ENST00000629293 USP6P35125 1406 aa6.73□□□□□ -1.33
LINC00550-201ENST00000629293 ROCK2O75116 1388 aaKnown RBP6.73□□□□□ -1.33
LINC00550-201ENST00000629293 PLSCR1O15162 318 aa6.73□□□□□ -1.33
LINC00550-201ENST00000629293 DDX12PQ92771 950 aa6.73□□□□□ -1.33
LINC00550-201ENST00000629293 CDHR5Q9HBB8 845 aa6.73□□□□□ -1.33
LINC00550-201ENST00000629293 ARHGEF28Q8N1W1 1705 aaKnown RBP6.73□□□□□ -1.33
LINC00550-201ENST00000629293 ARHGEF25Q86VW2 580 aa6.73□□□□□ -1.33
LINC00550-201ENST00000629293 KCNH5Q8NCM2 988 aa6.73□□□□□ -1.33
LINC00550-201ENST00000629293 TMC2Q8TDI7 906 aa6.73□□□□□ -1.33
LINC00550-201ENST00000629293 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.73□□□□□ -1.33
LINC00550-201ENST00000629293 AATKQ6ZMQ8 1374 aa6.72□□□□□ -1.33
LINC00550-201ENST00000629293 SLC15A2Q16348 729 aa6.72□□□□□ -1.33
LINC00550-201ENST00000629293 GPR162Q16538 588 aa6.72□□□□□ -1.33
LINC00550-201ENST00000629293 NME9Q86XW9 330 aa6.72□□□□□ -1.33
LINC00550-201ENST00000629293 TNS1Q9HBL0 1735 aaKnown RBP6.72□□□□□ -1.33
LINC00550-201ENST00000629293 KTN1Q86UP2 1357 aaKnown RBP6.72□□□□□ -1.33
LINC00550-201ENST00000629293 PHRF1Q9P1Y6 1649 aaKnown RBP6.72□□□□□ -1.33
LINC00550-201ENST00000629293 C11orf95C9JLR9 678 aaPredicted RBP6.72□□□□□ -1.33
LINC00550-201ENST00000629293 SYT17Q9BSW7 474 aa6.72□□□□□ -1.33
LINC00550-201ENST00000629293 CARD10Q9BWT7 1032 aa6.72□□□□□ -1.33
LINC00550-201ENST00000629293 NRKQ7Z2Y5 1582 aa6.72□□□□□ -1.33
LINC00550-201ENST00000629293 ITSN1Q15811 1721 aa6.72□□□□□ -1.33
LINC00550-201ENST00000629293 SENP3-EIF4A1A0A087X0R7 540 aa6.71□□□□□ -1.33
LINC00550-201ENST00000629293 ZNF784Q8NCA9 323 aaPredicted RBP6.71□□□□□ -1.33
LINC00550-201ENST00000629293 TRAIPQ9BWF2 469 aa6.71□□□□□ -1.33
LINC00550-201ENST00000629293 CDCA7Q9BWT1 371 aaPredicted RBP6.71□□□□□ -1.33
LINC00550-201ENST00000629293 PROCA1Q8NCQ7 364 aaPredicted RBP6.71□□□□□ -1.34
LINC00550-201ENST00000629293 CARD11Q9BXL7 1154 aa6.71□□□□□ -1.34
LINC00550-201ENST00000629293 NINLQ9Y2I6 1382 aa6.71□□□□□ -1.34
LINC00550-201ENST00000629293 FBLN1P23142 703 aa6.7□□□□□ -1.34
LINC00550-201ENST00000629293 TTLL12Q14166 644 aaPredicted RBP6.7□□□□□ -1.34
LINC00550-201ENST00000629293 SLC12A5Q9H2X9 1139 aa6.7□□□□□ -1.34
LINC00550-201ENST00000629293 WWC3Q9ULE0 1092 aa6.7□□□□□ -1.34
LINC00550-201ENST00000629293 CPSF1Q10570 1443 aaKnown RBP6.7□□□□□ -1.34
LINC00550-201ENST00000629293 CENPBP07199 599 aaPredicted RBP6.7□□□□□ -1.34
LINC00550-201ENST00000629293 ANKRD24Q8TF21 1146 aa6.7□□□□□ -1.34
LINC00550-201ENST00000629293 CRYBG1Q9Y4K1 1723 aa6.7□□□□□ -1.34
LINC00550-201ENST00000629293 GALR2O43603 387 aaPredicted RBP6.7□□□□□ -1.34
LINC00550-201ENST00000629293 IL2RBP14784 551 aa6.7□□□□□ -1.34
LINC00550-201ENST00000629293 MAP3K9P80192 1104 aa6.7□□□□□ -1.34
LINC00550-201ENST00000629293 MTFR1LQ9H019 292 aa6.7□□□□□ -1.34
LINC00550-201ENST00000629293 SKIV2LQ15477 1246 aaKnown RBP6.69□□□□□ -1.34
LINC00550-201ENST00000629293 HDGFL2Q7Z4V5 671 aaPredicted RBP6.69□□□□□ -1.34
LINC00550-201ENST00000629293 PLSCR2Q9NRY7 297 aa6.69□□□□□ -1.34
LINC00550-201ENST00000629293 TFCP2L1Q9NZI6 479 aa6.69□□□□□ -1.34
LINC00550-201ENST00000629293 BOLA1Q9Y3E2 137 aa6.69□□□□□ -1.34
LINC00550-201ENST00000629293 PDIA4P13667 645 aaKnown RBP6.69□□□□□ -1.34
LINC00550-201ENST00000629293 ERBB3P21860 1342 aa6.68□□□□□ -1.34
LINC00550-201ENST00000629293 ZNF827Q17R98 1081 aa6.68□□□□□ -1.34
LINC00550-201ENST00000629293 PCMTD1Q96MG8 357 aaPredicted RBP6.68□□□□□ -1.34
LINC00550-201ENST00000629293 TTC21AQ8NDW8 1320 aa6.68□□□□□ -1.34
LINC00550-201ENST00000629293 AMPHP49418 695 aa6.68□□□□□ -1.34
LINC00550-201ENST00000629293 ATN1P54259 1190 aaPredicted RBP6.68□□□□□ -1.34
LINC00550-201ENST00000629293 MSL1Q68DK7 614 aa6.68□□□□□ -1.34
LINC00550-201ENST00000629293 LRRC4BQ9NT99 713 aa6.68□□□□□ -1.34
LINC00550-201ENST00000629293 COG6Q9Y2V7 657 aa6.68□□□□□ -1.34
LINC00550-201ENST00000629293 NUP188Q5SRE5 1749 aa6.68□□□□□ -1.34
LINC00550-201ENST00000629293 LMO7Q8WWI1 1683 aa6.68□□□□□ -1.34
LINC00550-201ENST00000629293 BRD4O60885 1362 aaPredicted RBP6.68□□□□□ -1.34
LINC00550-201ENST00000629293 EVI5O60447 810 aa6.67□□□□□ -1.34
LINC00550-201ENST00000629293 POLD1P28340 1107 aa6.67□□□□□ -1.34
LINC00550-201ENST00000629293 CCDC7Q96M83 1385 aa6.67□□□□□ -1.34
LINC00550-201ENST00000629293 USHBP1Q8N6Y0 703 aa6.67□□□□□ -1.34
LINC00550-201ENST00000629293 FAM217BQ9NTX9 383 aaPredicted RBP6.67□□□□□ -1.34
LINC00550-201ENST00000629293 TOPAZ1Q8N9V7 1692 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms