RNA–Protein interactions for RNA: ENST00000628867.1

SPTAN1-215, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTAN1, Length 579 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-215ENST00000628867 FAM208AQ9UK61 1670 aaKnown RBP10.66□□□□□ -0.7
SPTAN1-215ENST00000628867 RTL1A6NKG5 1358 aa10.66□□□□□ -0.7
SPTAN1-215ENST00000628867 PLEKHG2Q9H7P9 1386 aa10.66□□□□□ -0.7
SPTAN1-215ENST00000628867 ASAP1Q9ULH1 1129 aa10.66□□□□□ -0.7
SPTAN1-215ENST00000628867 CD163L1Q9NR16 1453 aa10.66□□□□□ -0.7
SPTAN1-215ENST00000628867 C5P01031 1676 aa10.66□□□□□ -0.7
SPTAN1-215ENST00000628867 IFNL2Q8IZJ0 200 aa10.65□□□□□ -0.7
SPTAN1-215ENST00000628867 FYB1O15117 783 aa10.64□□□□□ -0.71
SPTAN1-215ENST00000628867 HSPA1AP0DMV8 641 aaKnown RBP10.64□□□□□ -0.71
SPTAN1-215ENST00000628867 HSPA1BP0DMV9 641 aaKnown RBP10.64□□□□□ -0.71
SPTAN1-215ENST00000628867 VEGFAP15692 232 aaPredicted RBP10.64□□□□□ -0.71
SPTAN1-215ENST00000628867 ADRA2BP18089 450 aa10.64□□□□□ -0.71
SPTAN1-215ENST00000628867 ITPK1Q13572 414 aa10.64□□□□□ -0.71
SPTAN1-215ENST00000628867 ARHGEF1Q92888 912 aaKnown RBP10.64□□□□□ -0.71
SPTAN1-215ENST00000628867 C4BP0C0L5 1744 aa10.64□□□□□ -0.71
SPTAN1-215ENST00000628867 PXDNLA1KZ92 1463 aa10.63□□□□□ -0.71
SPTAN1-215ENST00000628867 NKX1-1Q15270 411 aaPredicted RBP10.63□□□□□ -0.71
SPTAN1-215ENST00000628867 INSRP06213 1382 aa10.63□□□□□ -0.71
SPTAN1-215ENST00000628867 FLT4P35916 1363 aa10.63□□□□□ -0.71
SPTAN1-215ENST00000628867 DPY19L2Q6NUT2 758 aa10.62□□□□□ -0.71
SPTAN1-215ENST00000628867 USP54Q70EL1 1684 aa10.62□□□□□ -0.71
SPTAN1-215ENST00000628867 ST20-MTHFSA0A0A6YYL1 179 aa10.61□□□□□ -0.71
SPTAN1-215ENST00000628867 RPS6KA4O75676 772 aa10.61□□□□□ -0.71
SPTAN1-215ENST00000628867 GYS1P13807 737 aa10.61□□□□□ -0.71
SPTAN1-215ENST00000628867 RC3H1Q5TC82 1133 aaKnown RBP10.61□□□□□ -0.71
SPTAN1-215ENST00000628867 DCAF5Q96JK2 942 aa10.61□□□□□ -0.71
SPTAN1-215ENST00000628867 ATG3Q9NT62 314 aa10.61□□□□□ -0.71
SPTAN1-215ENST00000628867 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.61□□□□□ -0.715e-14■■■■□ 23.3
SPTAN1-215ENST00000628867 KCPQ6ZWJ8 1503 aa10.61□□□□□ -0.71
SPTAN1-215ENST00000628867 WDR90Q96KV7 1748 aa10.61□□□□□ -0.71
SPTAN1-215ENST00000628867 HSP90AB1P08238 724 aaKnown RBP10.6□□□□□ -0.71
SPTAN1-215ENST00000628867 CABP4P57796 275 aa10.6□□□□□ -0.71
SPTAN1-215ENST00000628867 ZPR1O75312 459 aa10.59□□□□□ -0.71
SPTAN1-215ENST00000628867 PHKG2P15735 406 aa10.59□□□□□ -0.71
SPTAN1-215ENST00000628867 KCNA3P22001 575 aa10.59□□□□□ -0.71
SPTAN1-215ENST00000628867 CHRNA5P30532 468 aa10.59□□□□□ -0.71
SPTAN1-215ENST00000628867 CDCA8Q53HL2 280 aa10.59□□□□□ -0.71
SPTAN1-215ENST00000628867 AIDAQ96BJ3 306 aa10.59□□□□□ -0.71
SPTAN1-215ENST00000628867 CICQ96RK0 1608 aaPredicted RBP10.58□□□□□ -0.72
SPTAN1-215ENST00000628867 RGPD2P0DJD1 1756 aa10.58□□□□□ -0.72
SPTAN1-215ENST00000628867 KIF24Q5T7B8 1368 aa10.58□□□□□ -0.72
SPTAN1-215ENST00000628867 TONSLQ96HA7 1378 aa10.58□□□□□ -0.72
SPTAN1-215ENST00000628867 GLTPD2A6NH11 291 aa10.58□□□□□ -0.72
SPTAN1-215ENST00000628867 ERVV-2B6SEH9 535 aa10.58□□□□□ -0.72
SPTAN1-215ENST00000628867 PTCD1O75127 700 aaKnown RBP10.58□□□□□ -0.72
SPTAN1-215ENST00000628867 LMNB1P20700 586 aa10.58□□□□□ -0.72
SPTAN1-215ENST00000628867 EMILIN1Q9Y6C2 1016 aa10.58□□□□□ -0.72
SPTAN1-215ENST00000628867 TAF1LQ8IZX4 1826 aa10.58□□□□□ -0.72
SPTAN1-215ENST00000628867 C10orf71Q711Q0 1435 aa10.58□□□□□ -0.72
SPTAN1-215ENST00000628867 ZC3H4Q9UPT8 1303 aaKnown RBP10.58□□□□□ -0.72
SPTAN1-215ENST00000628867 EYA1Q99502 592 aa10.57□□□□□ -0.72
SPTAN1-215ENST00000628867 CNTNAP4Q9C0A0 1308 aa10.57□□□□□ -0.72
SPTAN1-215ENST00000628867 UBR3Q6ZT12 1888 aa10.56□□□□□ -0.72
SPTAN1-215ENST00000628867 FKBP8Q14318 412 aa10.56□□□□□ -0.72
SPTAN1-215ENST00000628867 PLEKHO1Q53GL0 409 aaPredicted RBP10.56□□□□□ -0.72
SPTAN1-215ENST00000628867 MKRN1Q9UHC7 482 aaKnown RBP10.56□□□□□ -0.72
SPTAN1-215ENST00000628867 N4BP2Q86UW6 1770 aaPredicted RBP10.56□□□□□ -0.72
SPTAN1-215ENST00000628867 CRKLP46109 303 aaKnown RBP10.55□□□□□ -0.72
SPTAN1-215ENST00000628867 MTHFSP49914 203 aa10.55□□□□□ -0.72
SPTAN1-215ENST00000628867 RASSF7Q02833 373 aa10.55□□□□□ -0.72
SPTAN1-215ENST00000628867 C1orf141Q5JVX7 400 aa10.55□□□□□ -0.72
SPTAN1-215ENST00000628867 TTLL6Q8N841 843 aa10.55□□□□□ -0.72
SPTAN1-215ENST00000628867 TESK2Q96S53 571 aa10.55□□□□□ -0.72
SPTAN1-215ENST00000628867 SRP68Q9UHB9 627 aaKnown RBP10.55□□□□□ -0.72
SPTAN1-215ENST00000628867 WASHC2AQ641Q2 1341 aa10.55□□□□□ -0.72
SPTAN1-215ENST00000628867 H0YIN7 160 aa10.54□□□□□ -0.72
SPTAN1-215ENST00000628867 TNNT2P45379 298 aaPredicted RBP10.53□□□□□ -0.72
SPTAN1-215ENST00000628867 AMOTQ4VCS5 1084 aa10.53□□□□□ -0.72
SPTAN1-215ENST00000628867 SLC4A9Q96Q91 983 aa10.53□□□□□ -0.72
SPTAN1-215ENST00000628867 CREBZFQ9NS37 354 aa10.53□□□□□ -0.72
SPTAN1-215ENST00000628867 ITGB4P16144 1822 aa10.53□□□□□ -0.72
SPTAN1-215ENST00000628867 NPHP1O15259 732 aa10.52□□□□□ -0.73
SPTAN1-215ENST00000628867 CTCFP49711 727 aaPredicted RBP10.52□□□□□ -0.73
SPTAN1-215ENST00000628867 DDR1Q08345 913 aa10.52□□□□□ -0.73
SPTAN1-215ENST00000628867 ERFEQ4G0M1 354 aa10.52□□□□□ -0.73
SPTAN1-215ENST00000628867 USPL1Q5W0Q7 1092 aa10.52□□□□□ -0.73
SPTAN1-215ENST00000628867 CHADLQ6NUI6 762 aa10.52□□□□□ -0.73
SPTAN1-215ENST00000628867 ZNF530Q6P9A1 599 aaPredicted RBP10.52□□□□□ -0.73
SPTAN1-215ENST00000628867 C2CD5Q86YS7 1000 aa10.52□□□□□ -0.73
SPTAN1-215ENST00000628867 NFATC2IPQ8NCF5 419 aa10.52□□□□□ -0.73
SPTAN1-215ENST00000628867 ZNF622Q969S3 477 aaKnown RBP eCLIP10.52□□□□□ -0.73
SPTAN1-215ENST00000628867 PRDM10Q9NQV6 1147 aa10.52□□□□□ -0.73
SPTAN1-215ENST00000628867 TOGARAM1Q9Y4F4 1720 aa10.52□□□□□ -0.73
SPTAN1-215ENST00000628867 USP42Q9H9J4 1324 aaKnown RBP10.52□□□□□ -0.73
SPTAN1-215ENST00000628867 C4AP0C0L4 1744 aa10.51□□□□□ -0.73
SPTAN1-215ENST00000628867 POLRMTO00411 1230 aaKnown RBP10.51□□□□□ -0.73
SPTAN1-215ENST00000628867 TM4SF1P30408 202 aa10.51□□□□□ -0.73
SPTAN1-215ENST00000628867 NPM2Q86SE8 214 aaKnown RBP10.51□□□□□ -0.73
SPTAN1-215ENST00000628867 ZNF219Q9P2Y4 722 aaPredicted RBP10.51□□□□□ -0.73
SPTAN1-215ENST00000628867 SERPINB2P05120 415 aa10.5□□□□□ -0.73
SPTAN1-215ENST00000628867 POLR3GLQ9BT43 218 aa10.5□□□□□ -0.73
SPTAN1-215ENST00000628867 KIF13BQ9NQT8 1826 aa10.49□□□□□ -0.73
SPTAN1-215ENST00000628867 FOXN1O15353 648 aa10.49□□□□□ -0.73
SPTAN1-215ENST00000628867 EIF4A2Q14240 407 aaKnown RBP10.49□□□□□ -0.73
SPTAN1-215ENST00000628867 BICDL1Q6ZP65 573 aa10.49□□□□□ -0.73
SPTAN1-215ENST00000628867 POLKQ9UBT6 870 aa10.49□□□□□ -0.73
SPTAN1-215ENST00000628867 CLEC11AQ9Y240 323 aa10.49□□□□□ -0.73
SPTAN1-215ENST00000628867 KDRP35968 1356 aa10.49□□□□□ -0.73
SPTAN1-215ENST00000628867 TNRC6CQ9HCJ0 1690 aaKnown RBP10.48□□□□□ -0.73
SPTAN1-215ENST00000628867 IQCA1LA6NCM1 817 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms