RNA–Protein interactions for RNA: ENST00000628729.2

PDCD6-214, Transcript of programmed cell death 6, humanhuman

TSL 5 BASIC

Gene PDCD6, Length 1,073 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6-214ENST00000628729 SLC4A9Q96Q91 983 aa22.69■■□□□ 1.22
PDCD6-214ENST00000628729 KNSTRNQ9Y448 316 aa22.69■■□□□ 1.22
PDCD6-214ENST00000628729 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.68■■□□□ 1.22
PDCD6-214ENST00000628729 GPR162Q16538 588 aa22.67■■□□□ 1.22
PDCD6-214ENST00000628729 FLAD1Q8NFF5 587 aa22.67■■□□□ 1.22
PDCD6-214ENST00000628729 SCN11AQ9UI33 1791 aa22.67■■□□□ 1.22
PDCD6-214ENST00000628729 YBX3P16989 372 aaKnown RBP eCLIP22.66■■□□□ 1.221e-8■□□□□ 8.4
PDCD6-214ENST00000628729 IL13P35225 146 aa22.66■■□□□ 1.22
PDCD6-214ENST00000628729 ZNF530Q6P9A1 599 aaPredicted RBP22.66■■□□□ 1.22
PDCD6-214ENST00000628729 C4AP0C0L4 1744 aa22.65■■□□□ 1.22
PDCD6-214ENST00000628729 TJP1Q07157 1748 aa22.65■■□□□ 1.22
PDCD6-214ENST00000628729 CICQ96RK0 1608 aaPredicted RBP22.65■■□□□ 1.22
PDCD6-214ENST00000628729 DCAF5Q96JK2 942 aa22.65■■□□□ 1.22
PDCD6-214ENST00000628729 VIRMAQ69YN4 1812 aaKnown RBP22.64■■□□□ 1.22
PDCD6-214ENST00000628729 ERVV-2B6SEH9 535 aa22.64■■□□□ 1.21
PDCD6-214ENST00000628729 PER1O15534 1290 aaPredicted RBP22.64■■□□□ 1.21
PDCD6-214ENST00000628729 SSFA2P28290 1259 aa22.64■■□□□ 1.21
PDCD6-214ENST00000628729 ATP6V1AP38606 617 aa22.64■■□□□ 1.21
PDCD6-214ENST00000628729 SULT6B1Q6IMI4 303 aa22.64■■□□□ 1.21
PDCD6-214ENST00000628729 PELP1Q8IZL8 1130 aaKnown RBP22.64■■□□□ 1.21
PDCD6-214ENST00000628729 GNPATO15228 680 aa22.63■■□□□ 1.21
PDCD6-214ENST00000628729 PLEKHO1Q53GL0 409 aaPredicted RBP22.63■■□□□ 1.21
PDCD6-214ENST00000628729 MYH14Q7Z406 1995 aaKnown RBP22.63■■□□□ 1.21
PDCD6-214ENST00000628729 KIAA1551Q9HCM1 1747 aa22.62■■□□□ 1.21
PDCD6-214ENST00000628729 HMGB2P26583 209 aaKnown RBP22.61■■□□□ 1.21
PDCD6-214ENST00000628729 AMOTQ4VCS5 1084 aa22.61■■□□□ 1.21
PDCD6-214ENST00000628729 ADAMTS7Q9UKP4 1686 aa22.61■■□□□ 1.21
PDCD6-214ENST00000628729 COL3A1P02461 1466 aaPredicted RBP22.6■■□□□ 1.21
PDCD6-214ENST00000628729 HSP90AB1P08238 724 aaKnown RBP22.6■■□□□ 1.21
PDCD6-214ENST00000628729 MRC1P22897 1456 aa22.6■■□□□ 1.21
PDCD6-214ENST00000628729 KIF13BQ9NQT8 1826 aa22.59■■□□□ 1.21
PDCD6-214ENST00000628729 MTHFSP49914 203 aa22.59■■□□□ 1.21
PDCD6-214ENST00000628729 CD2APQ9Y5K6 639 aa22.59■■□□□ 1.21
PDCD6-214ENST00000628729 CC2D1BQ5T0F9 858 aaKnown RBP22.57■■□□□ 1.2
PDCD6-214ENST00000628729 RBM42Q9BTD8 480 aaKnown RBP22.57■■□□□ 1.2
PDCD6-214ENST00000628729 CABP4P57796 275 aa22.56■■□□□ 1.2
PDCD6-214ENST00000628729 C1orf141Q5JVX7 400 aa22.56■■□□□ 1.2
PDCD6-214ENST00000628729 CNTNAP4Q9C0A0 1308 aa22.56■■□□□ 1.2
PDCD6-214ENST00000628729 HMOX1P09601 288 aa22.54■■□□□ 1.2
PDCD6-214ENST00000628729 NFATC2IPQ8NCF5 419 aa22.54■■□□□ 1.2
PDCD6-214ENST00000628729 N4BP2Q86UW6 1770 aaPredicted RBP22.53■■□□□ 1.2
PDCD6-214ENST00000628729 KCPQ6ZWJ8 1503 aa22.52■■□□□ 1.2
PDCD6-214ENST00000628729 NPC1L1Q9UHC9 1359 aa22.52■■□□□ 1.2
PDCD6-214ENST00000628729 PTCD1O75127 700 aaKnown RBP22.52■■□□□ 1.2
PDCD6-214ENST00000628729 RC3H1Q5TC82 1133 aaKnown RBP22.52■■□□□ 1.2
PDCD6-214ENST00000628729 RTCBQ9Y3I0 505 aaKnown RBP22.52■■□□□ 1.2
PDCD6-214ENST00000628729 PXDNLA1KZ92 1463 aa22.52■■□□□ 1.2
PDCD6-214ENST00000628729 UBR2Q8IWV8 1755 aa22.51■■□□□ 1.19
PDCD6-214ENST00000628729 MMP10P09238 476 aa22.51■■□□□ 1.19
PDCD6-214ENST00000628729 WWC3Q9ULE0 1092 aa22.51■■□□□ 1.19
PDCD6-214ENST00000628729 C10orf71Q711Q0 1435 aa22.5■■□□□ 1.19
PDCD6-214ENST00000628729 AKAP4Q5JQC9 854 aa22.5■■□□□ 1.19
PDCD6-214ENST00000628729 ARHGEF1Q92888 912 aaKnown RBP22.5■■□□□ 1.19
PDCD6-214ENST00000628729 LGR6Q9HBX8 967 aa22.5■■□□□ 1.19
PDCD6-214ENST00000628729 GRIN3BO60391 1043 aa22.49■■□□□ 1.19
PDCD6-214ENST00000628729 BRCA1P38398 1863 aaKnown RBP22.48■■□□□ 1.19
PDCD6-214ENST00000628729 RPS6KA4O75676 772 aa22.48■■□□□ 1.19
PDCD6-214ENST00000628729 GYS1P13807 737 aa22.48■■□□□ 1.19
PDCD6-214ENST00000628729 CRKLP46109 303 aaKnown RBP22.48■■□□□ 1.19
PDCD6-214ENST00000628729 TRAPPC3LQ5T215 181 aa22.48■■□□□ 1.19
PDCD6-214ENST00000628729 DIAPH1O60610 1272 aaKnown RBP22.47■■□□□ 1.19
PDCD6-214ENST00000628729 CNGB1Q14028 1251 aaPredicted RBP22.47■■□□□ 1.19
PDCD6-214ENST00000628729 MTHFSDQ2M296 383 aaKnown RBP22.47■■□□□ 1.19
PDCD6-214ENST00000628729 SLC52A2Q9HAB3 445 aa22.47■■□□□ 1.19
PDCD6-214ENST00000628729 SIPA1L3O60292 1781 aaPredicted RBP22.47■■□□□ 1.19
PDCD6-214ENST00000628729 ADCY9O60503 1353 aa22.47■■□□□ 1.19
PDCD6-214ENST00000628729 RNMTO43148 476 aaKnown RBP22.45■■□□□ 1.18
PDCD6-214ENST00000628729 ATP10DQ9P241 1426 aa22.45■■□□□ 1.18
PDCD6-214ENST00000628729 INTS5Q6P9B9 1019 aaKnown RBP22.44■■□□□ 1.18
PDCD6-214ENST00000628729 SRP68Q9UHB9 627 aaKnown RBP22.44■■□□□ 1.18
PDCD6-214ENST00000628729 SLC39A6Q13433 755 aa22.43■■□□□ 1.18
PDCD6-214ENST00000628729 USP42Q9H9J4 1324 aaKnown RBP22.42■■□□□ 1.18
PDCD6-214ENST00000628729 RFC4P35249 363 aa22.42■■□□□ 1.18
PDCD6-214ENST00000628729 C1QTNF8P60827 252 aa22.42■■□□□ 1.18
PDCD6-214ENST00000628729 DNAJC10Q8IXB1 793 aa22.42■■□□□ 1.18
PDCD6-214ENST00000628729 NLGN1Q8N2Q7 840 aa22.42■■□□□ 1.18
PDCD6-214ENST00000628729 DDR1Q08345 913 aa22.39■■□□□ 1.17
PDCD6-214ENST00000628729 FKBP8Q14318 412 aa22.39■■□□□ 1.17
PDCD6-214ENST00000628729 SOS1Q07889 1333 aaPredicted RBP22.38■■□□□ 1.17
PDCD6-214ENST00000628729 GIGYF1O75420 1035 aaPredicted RBP22.38■■□□□ 1.17
PDCD6-214ENST00000628729 U2SURPO15042 1029 aaKnown RBP22.37■■□□□ 1.17
PDCD6-214ENST00000628729 CYP19A1P11511 503 aaPredicted RBP22.37■■□□□ 1.17
PDCD6-214ENST00000628729 CCDC87Q9NVE4 849 aa22.37■■□□□ 1.17
PDCD6-214ENST00000628729 NRXN2Q9P2S2 1712 aa22.37■■□□□ 1.17
PDCD6-214ENST00000628729 CEP350Q5VT06 3117 aa22.36■■□□□ 1.17
PDCD6-214ENST00000628729 A0A0G2JLW4 131 aa22.36■■□□□ 1.17
PDCD6-214ENST00000628729 AFDNP55196 1824 aaKnown RBP22.36■■□□□ 1.17
PDCD6-214ENST00000628729 ARFGEF1Q9Y6D6 1849 aa22.36■■□□□ 1.17
PDCD6-214ENST00000628729 ZBTB1Q9Y2K1 713 aa22.35■■□□□ 1.17
PDCD6-214ENST00000628729 COL15A1P39059 1388 aa22.35■■□□□ 1.17
PDCD6-214ENST00000628729 DPEP1P16444 411 aa22.34■■□□□ 1.17
PDCD6-214ENST00000628729 TGFB2P61812 414 aa22.34■■□□□ 1.17
PDCD6-214ENST00000628729 IL17REQ8NFR9 667 aa22.34■■□□□ 1.17
PDCD6-214ENST00000628729 PARP3Q9Y6F1 533 aa22.34■■□□□ 1.17
PDCD6-214ENST00000628729 SCN7AQ01118 1682 aa22.33■■□□□ 1.17
PDCD6-214ENST00000628729 KCNA3P22001 575 aa22.33■■□□□ 1.17
PDCD6-214ENST00000628729 PHACTR3Q96KR7 559 aa22.32■■□□□ 1.16
PDCD6-214ENST00000628729 RSPH6AQ9H0K4 717 aa22.32■■□□□ 1.16
PDCD6-214ENST00000628729 CEMIPQ8WUJ3 1361 aa22.32■■□□□ 1.16
PDCD6-214ENST00000628729 SENP3-EIF4A1A0A087X0R7 540 aa22.31■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms