RNA–Protein interactions for RNA: ENST00000627622.1

CHD2-212, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 2 BASIC

Gene CHD2, Length 1,740 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-212ENST00000627622 ASAP1Q9ULH1 1129 aa12.05□□□□□ -0.48
CHD2-212ENST00000627622 N4BP2Q86UW6 1770 aaPredicted RBP12.04□□□□□ -0.48
CHD2-212ENST00000627622 HSPA6P17066 643 aa12.04□□□□□ -0.48
CHD2-212ENST00000627622 ATP6V1AP38606 617 aa12.04□□□□□ -0.48
CHD2-212ENST00000627622 IFNL2Q8IZJ0 200 aa12.04□□□□□ -0.48
CHD2-212ENST00000627622 EYA1Q99502 592 aa12.04□□□□□ -0.48
CHD2-212ENST00000627622 WWC3Q9ULE0 1092 aa12.04□□□□□ -0.48
CHD2-212ENST00000627622 GNPATO15228 680 aa12.03□□□□□ -0.48
CHD2-212ENST00000627622 ITPK1Q13572 414 aa12.03□□□□□ -0.48
CHD2-212ENST00000627622 ZNF831Q5JPB2 1677 aa12.03□□□□□ -0.48
CHD2-212ENST00000627622 PHKG2P15735 406 aa12.03□□□□□ -0.48
CHD2-212ENST00000627622 KIAA1551Q9HCM1 1747 aa12.02□□□□□ -0.48
CHD2-212ENST00000627622 CICQ96RK0 1608 aaPredicted RBP12.02□□□□□ -0.48
CHD2-212ENST00000627622 ATG3Q9NT62 314 aa12.02□□□□□ -0.49
CHD2-212ENST00000627622 MMP10P09238 476 aa12.01□□□□□ -0.49
CHD2-212ENST00000627622 POLKQ9UBT6 870 aa12.01□□□□□ -0.49
CHD2-212ENST00000627622 COL5A3P25940 1745 aaPredicted RBP12.01□□□□□ -0.49
CHD2-212ENST00000627622 TRAPPC3LQ5T215 181 aa12□□□□□ -0.49
CHD2-212ENST00000627622 BRCA1P38398 1863 aaKnown RBP12□□□□□ -0.49
CHD2-212ENST00000627622 PLEKHG2Q9H7P9 1386 aa12□□□□□ -0.49
CHD2-212ENST00000627622 MYH14Q7Z406 1995 aaKnown RBP12□□□□□ -0.49
CHD2-212ENST00000627622 KIF3CO14782 793 aa12□□□□□ -0.49
CHD2-212ENST00000627622 TGFB2P61812 414 aa12□□□□□ -0.49
CHD2-212ENST00000627622 RTCBQ9Y3I0 505 aaKnown RBP12□□□□□ -0.49
CHD2-212ENST00000627622 PXDNLA1KZ92 1463 aa11.99□□□□□ -0.49
CHD2-212ENST00000627622 ERVV-2B6SEH9 535 aa11.99□□□□□ -0.49
CHD2-212ENST00000627622 EIF4A2Q14240 407 aaKnown RBP11.99□□□□□ -0.49
CHD2-212ENST00000627622 NLGN1Q8N2Q7 840 aa11.99□□□□□ -0.49
CHD2-212ENST00000627622 KDRP35968 1356 aa11.99□□□□□ -0.49
CHD2-212ENST00000627622 SLC4A9Q96Q91 983 aa11.98□□□□□ -0.49
CHD2-212ENST00000627622 C4AP0C0L4 1744 aa11.98□□□□□ -0.49
CHD2-212ENST00000627622 ARFGEF1Q9Y6D6 1849 aa11.98□□□□□ -0.49
CHD2-212ENST00000627622 RC3H1Q5TC82 1133 aaKnown RBP11.97□□□□□ -0.49
CHD2-212ENST00000627622 ARHGEF1Q92888 912 aaKnown RBP11.97□□□□□ -0.49
CHD2-212ENST00000627622 RBM42Q9BTD8 480 aaKnown RBP11.97□□□□□ -0.49
CHD2-212ENST00000627622 BCS1LQ9Y276 419 aa11.97□□□□□ -0.49
CHD2-212ENST00000627622 A0A0G2JLW4 131 aa11.97□□□□□ -0.49
CHD2-212ENST00000627622 HSP90AB1P08238 724 aaKnown RBP11.97□□□□□ -0.49
CHD2-212ENST00000627622 TNNT2P45379 298 aaPredicted RBP11.97□□□□□ -0.49
CHD2-212ENST00000627622 DCAF5Q96JK2 942 aa11.97□□□□□ -0.49
CHD2-212ENST00000627622 CCDC87Q9NVE4 849 aa11.97□□□□□ -0.49
CHD2-212ENST00000627622 C10orf71Q711Q0 1435 aa11.96□□□□□ -0.49
CHD2-212ENST00000627622 CNTNAP4Q9C0A0 1308 aa11.96□□□□□ -0.49
CHD2-212ENST00000627622 RPS6KA4O75676 772 aa11.95□□□□□ -0.5
CHD2-212ENST00000627622 GYS1P13807 737 aa11.95□□□□□ -0.5
CHD2-212ENST00000627622 RFC4P35249 363 aa11.95□□□□□ -0.5
CHD2-212ENST00000627622 PLEKHO1Q53GL0 409 aaPredicted RBP11.95□□□□□ -0.5
CHD2-212ENST00000627622 ARHGAP27Q6ZUM4 889 aa11.95□□□□□ -0.5
CHD2-212ENST00000627622 PARP3Q9Y6F1 533 aa11.95□□□□□ -0.5
CHD2-212ENST00000627622 TOMM70O94826 608 aa11.94□□□□□ -0.5
CHD2-212ENST00000627622 DPEP1P16444 411 aa11.94□□□□□ -0.5
CHD2-212ENST00000627622 APLP1P51693 650 aa11.94□□□□□ -0.5
CHD2-212ENST00000627622 POLR3GLQ9BT43 218 aa11.94□□□□□ -0.5
CHD2-212ENST00000627622 TIMELESSQ9UNS1 1208 aa11.94□□□□□ -0.5
CHD2-212ENST00000627622 KDM6AO15550 1401 aaPredicted RBP11.94□□□□□ -0.5
CHD2-212ENST00000627622 FCHSD2O94868 740 aa11.94□□□□□ -0.5
CHD2-212ENST00000627622 CABP4P57796 275 aa11.94□□□□□ -0.5
CHD2-212ENST00000627622 AMOTQ4VCS5 1084 aa11.94□□□□□ -0.5
CHD2-212ENST00000627622 SBF1O95248 1867 aa11.93□□□□□ -0.5
CHD2-212ENST00000627622 SCN11AQ9UI33 1791 aa11.93□□□□□ -0.5
CHD2-212ENST00000627622 ZNF530Q6P9A1 599 aaPredicted RBP11.93□□□□□ -0.5
CHD2-212ENST00000627622 VIRMAQ69YN4 1812 aaKnown RBP11.93□□□□□ -0.5
CHD2-212ENST00000627622 KCNA3P22001 575 aa11.92□□□□□ -0.5
CHD2-212ENST00000627622 MTHFSP49914 203 aa11.92□□□□□ -0.5
CHD2-212ENST00000627622 TJP1Q07157 1748 aa11.92□□□□□ -0.5
CHD2-212ENST00000627622 WDR90Q96KV7 1748 aa11.92□□□□□ -0.5
CHD2-212ENST00000627622 PTCD1O75127 700 aaKnown RBP11.91□□□□□ -0.5
CHD2-212ENST00000627622 TRIM26Q12899 539 aaPredicted RBP11.91□□□□□ -0.5
CHD2-212ENST00000627622 PIM2Q9P1W9 311 aa11.91□□□□□ -0.5
CHD2-212ENST00000627622 CRKLP46109 303 aaKnown RBP11.91□□□□□ -0.5
CHD2-212ENST00000627622 C1orf141Q5JVX7 400 aa11.91□□□□□ -0.5
CHD2-212ENST00000627622 DNAJC5GQ8N7S2 189 aa11.91□□□□□ -0.5
CHD2-212ENST00000627622 NFATC2IPQ8NCF5 419 aa11.91□□□□□ -0.5
CHD2-212ENST00000627622 NMRK2Q9NPI5 230 aa11.91□□□□□ -0.5
CHD2-212ENST00000627622 C9orf131Q5VYM1 1079 aa11.9□□□□□ -0.5
CHD2-212ENST00000627622 PANK3Q9H999 370 aa11.9□□□□□ -0.5
CHD2-212ENST00000627622 ADAMTS7Q9UKP4 1686 aa11.89□□□□□ -0.51
CHD2-212ENST00000627622 AEBP1Q8IUX7 1158 aa11.89□□□□□ -0.51
CHD2-212ENST00000627622 SRP68Q9UHB9 627 aaKnown RBP11.89□□□□□ -0.51
CHD2-212ENST00000627622 AFDNP55196 1824 aaKnown RBP11.89□□□□□ -0.51
CHD2-212ENST00000627622 FKBP8Q14318 412 aa11.89□□□□□ -0.51
CHD2-212ENST00000627622 DALRD3Q5D0E6 543 aaKnown RBP11.89□□□□□ -0.51
CHD2-212ENST00000627622 RBM46Q8TBY0 533 aaKnown RBP11.89□□□□□ -0.51
CHD2-212ENST00000627622 USP42Q9H9J4 1324 aaKnown RBP11.88□□□□□ -0.51
CHD2-212ENST00000627622 CCDC88AQ3V6T2 1871 aa11.88□□□□□ -0.51
CHD2-212ENST00000627622 DDR1Q08345 913 aa11.88□□□□□ -0.51
CHD2-212ENST00000627622 C16orf71Q8IYS4 520 aaPredicted RBP11.88□□□□□ -0.51
CHD2-212ENST00000627622 TNRC6CQ9HCJ0 1690 aaKnown RBP11.88□□□□□ -0.51
CHD2-212ENST00000627622 SULT6B1Q6IMI4 303 aa11.87□□□□□ -0.51
CHD2-212ENST00000627622 MORC1Q86VD1 984 aa11.87□□□□□ -0.51
CHD2-212ENST00000627622 KCPQ6ZWJ8 1503 aa11.86□□□□□ -0.51
CHD2-212ENST00000627622 KDM2BQ8NHM5 1336 aa11.86□□□□□ -0.51
CHD2-212ENST00000627622 TM4SF1P30408 202 aa11.86□□□□□ -0.51
CHD2-212ENST00000627622 EIF4G2P78344 907 aaKnown RBP eCLIP11.86□□□□□ -0.51
CHD2-212ENST00000627622 INTS5Q6P9B9 1019 aaKnown RBP11.86□□□□□ -0.51
CHD2-212ENST00000627622 RNF181Q9P0P0 153 aa11.86□□□□□ -0.51
CHD2-212ENST00000627622 CLSPNQ9HAW4 1339 aa11.86□□□□□ -0.51
CHD2-212ENST00000627622 POLRMTO00411 1230 aaKnown RBP11.86□□□□□ -0.51
CHD2-212ENST00000627622 ZPR1O75312 459 aa11.86□□□□□ -0.51
CHD2-212ENST00000627622 CHRNA5P30532 468 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 84 ms