RNA–Protein interactions for RNA: ENST00000625927.2

ACAA1-219, Transcript of acetyl-CoA acyltransferase 1, humanhuman

TSL 5 BASIC

Gene ACAA1, Length 1,760 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACAA1-219ENST00000625927 B4GALNT3Q6L9W6 998 aa29.01■■■□□ 2.23
ACAA1-219ENST00000625927 CLUAP1Q96AJ1 413 aa29.01■■■□□ 2.23
ACAA1-219ENST00000625927 CCDC9Q9Y3X0 531 aaKnown RBP29.01■■■□□ 2.23
ACAA1-219ENST00000625927 KIF16BQ96L93 1317 aa29■■■□□ 2.23
ACAA1-219ENST00000625927 SLC52A2Q9HAB3 445 aa29■■■□□ 2.23
ACAA1-219ENST00000625927 LRP6O75581 1613 aa29■■■□□ 2.23
ACAA1-219ENST00000625927 NWD2Q9ULI1 1742 aa28.99■■■□□ 2.23
ACAA1-219ENST00000625927 SPATA31A1Q5TZJ5 1347 aa28.99■■■□□ 2.23
ACAA1-219ENST00000625927 KDM3BQ7LBC6 1761 aa28.99■■■□□ 2.23
ACAA1-219ENST00000625927 DISP2A7MBM2 1401 aa28.99■■■□□ 2.23
ACAA1-219ENST00000625927 NFATC2IPQ8NCF5 419 aa28.98■■■□□ 2.23
ACAA1-219ENST00000625927 EIF4A1P60842 406 aaKnown RBP28.98■■■□□ 2.23
ACAA1-219ENST00000625927 COG6Q9Y2V7 657 aa28.98■■■□□ 2.23
ACAA1-219ENST00000625927 SHANK3Q9BYB0 1731 aa28.97■■■□□ 2.23
ACAA1-219ENST00000625927 RLBP1P12271 317 aa28.97■■■□□ 2.23
ACAA1-219ENST00000625927 UNC5CLQ8IV45 518 aa28.97■■■□□ 2.23
ACAA1-219ENST00000625927 SIPA1L3O60292 1781 aaPredicted RBP28.97■■■□□ 2.23
ACAA1-219ENST00000625927 IPO8O15397 1037 aaKnown RBP28.96■■■□□ 2.23
ACAA1-219ENST00000625927 TRIM27P14373 513 aa28.96■■■□□ 2.23
ACAA1-219ENST00000625927 BRPF1P55201 1214 aaPredicted RBP28.96■■■□□ 2.23
ACAA1-219ENST00000625927 ATF7IPQ6VMQ6 1270 aa28.96■■■□□ 2.23
ACAA1-219ENST00000625927 FTSJ3Q8IY81 847 aaKnown RBP28.96■■■□□ 2.23
ACAA1-219ENST00000625927 MEX3CQ5U5Q3 659 aaKnown RBP28.96■■■□□ 2.23
ACAA1-219ENST00000625927 CABP4P57796 275 aa28.95■■■□□ 2.22
ACAA1-219ENST00000625927 DZIP1LQ8IYY4 767 aaKnown RBP28.95■■■□□ 2.22
ACAA1-219ENST00000625927 SPATA31A5Q5VU36 1347 aa28.95■■■□□ 2.22
ACAA1-219ENST00000625927 SPATA31A7Q8IWB4 1347 aa28.95■■■□□ 2.22
ACAA1-219ENST00000625927 NECTIN2Q92692 538 aa28.94■■■□□ 2.22
ACAA1-219ENST00000625927 CCDC136Q96JN2 1154 aa28.94■■■□□ 2.22
ACAA1-219ENST00000625927 SLC39A6Q13433 755 aa28.93■■■□□ 2.22
ACAA1-219ENST00000625927 THRAP3Q9Y2W1 955 aaKnown RBP28.93■■■□□ 2.22
ACAA1-219ENST00000625927 EXOC5O00471 708 aa28.92■■■□□ 2.22
ACAA1-219ENST00000625927 MS4A1P11836 297 aa28.92■■■□□ 2.22
ACAA1-219ENST00000625927 NKX1-1Q15270 411 aaPredicted RBP28.92■■■□□ 2.22
ACAA1-219ENST00000625927 MRC1P22897 1456 aa28.92■■■□□ 2.22
ACAA1-219ENST00000625927 WNK3Q9BYP7 1800 aa28.91■■■□□ 2.22
ACAA1-219ENST00000625927 BCL9LQ86UU0 1499 aa28.91■■■□□ 2.22
ACAA1-219ENST00000625927 SOS1Q07889 1333 aaPredicted RBP28.9■■■□□ 2.22
ACAA1-219ENST00000625927 SLC4A2P04920 1241 aa28.9■■■□□ 2.22
ACAA1-219ENST00000625927 FNBP4Q8N3X1 1017 aaPredicted RBP28.9■■■□□ 2.22
ACAA1-219ENST00000625927 CCDC30Q5VVM6 783 aa28.89■■■□□ 2.22
ACAA1-219ENST00000625927 ZNF790Q6PG37 636 aa28.89■■■□□ 2.22
ACAA1-219ENST00000625927 CDCA7Q9BWT1 371 aaPredicted RBP28.89■■■□□ 2.22
ACAA1-219ENST00000625927 EIF2S2P20042 333 aaKnown RBP28.88■■■□□ 2.21
ACAA1-219ENST00000625927 STK31Q9BXU1 1019 aa28.88■■■□□ 2.21
ACAA1-219ENST00000625927 USP21Q9UK80 565 aa28.88■■■□□ 2.21
ACAA1-219ENST00000625927 ERVV-2B6SEH9 535 aa28.88■■■□□ 2.21
ACAA1-219ENST00000625927 HDGFL1Q5TGJ6 251 aa28.88■■■□□ 2.21
ACAA1-219ENST00000625927 VPS72Q15906 364 aa28.87■■■□□ 2.21
ACAA1-219ENST00000625927 ARHGAP45Q92619 1136 aa28.87■■■□□ 2.21
ACAA1-219ENST00000625927 MVPQ14764 893 aaKnown RBP28.85■■■□□ 2.21
ACAA1-219ENST00000625927 TTC5Q8N0Z6 440 aa28.85■■■□□ 2.21
ACAA1-219ENST00000625927 TMEM57Q8N5G2 664 aa28.85■■■□□ 2.21
ACAA1-219ENST00000625927 TNS2Q63HR2 1409 aa28.85■■■□□ 2.21
ACAA1-219ENST00000625927 DDB1Q16531 1140 aa28.85■■■□□ 2.21
ACAA1-219ENST00000625927 BARGINQ6ZT62 677 aa28.85■■■□□ 2.21
ACAA1-219ENST00000625927 ITPRIPQ8IWB1 547 aa28.85■■■□□ 2.21
ACAA1-219ENST00000625927 HOXB7P09629 217 aa28.84■■■□□ 2.21
ACAA1-219ENST00000625927 GIGYF1O75420 1035 aaPredicted RBP28.83■■■□□ 2.21
ACAA1-219ENST00000625927 API5Q9BZZ5 524 aaKnown RBP28.83■■■□□ 2.21
ACAA1-219ENST00000625927 PRAMEF22A3QJZ6 481 aa28.83■■■□□ 2.21
ACAA1-219ENST00000625927 FAM98CQ17RN3 349 aaKnown RBP28.83■■■□□ 2.21
ACAA1-219ENST00000625927 G2E3Q7L622 706 aa28.83■■■□□ 2.21
ACAA1-219ENST00000625927 HEG1Q9ULI3 1381 aa28.81■■■□□ 2.2
ACAA1-219ENST00000625927 TOGARAM1Q9Y4F4 1720 aa28.81■■■□□ 2.2
ACAA1-219ENST00000625927 ZNF496Q96IT1 587 aaPredicted RBP28.8■■■□□ 2.2
ACAA1-219ENST00000625927 TMOD3Q9NYL9 352 aa28.8■■■□□ 2.2
ACAA1-219ENST00000625927 AFF2P51816 1311 aa28.8■■■□□ 2.2
ACAA1-219ENST00000625927 PTPRCP08575 1304 aa28.79■■■□□ 2.2
ACAA1-219ENST00000625927 FMNL2Q96PY5 1086 aa28.78■■■□□ 2.2
ACAA1-219ENST00000625927 CHPF2Q9P2E5 772 aa28.78■■■□□ 2.2
ACAA1-219ENST00000625927 ABCC4O15439 1325 aa28.77■■■□□ 2.2
ACAA1-219ENST00000625927 CHMP4AQ9BY43 222 aa28.77■■■□□ 2.2
ACAA1-219ENST00000625927 DDX19BQ9UMR2 479 aa28.77■■■□□ 2.2
ACAA1-219ENST00000625927 A0A0G2JS52 829 aa28.76■■■□□ 2.19
ACAA1-219ENST00000625927 MYT1Q01538 1121 aa28.76■■■□□ 2.19
ACAA1-219ENST00000625927 TNKS1BP1Q9C0C2 1729 aaKnown RBP28.76■■■□□ 2.19
ACAA1-219ENST00000625927 FLIIQ13045 1269 aa28.75■■■□□ 2.19
ACAA1-219ENST00000625927 RGS12O14924 1447 aa28.74■■■□□ 2.19
ACAA1-219ENST00000625927 ANXA1P04083 346 aa28.74■■■□□ 2.19
ACAA1-219ENST00000625927 MARCH10Q8NA82 808 aaPredicted RBP28.74■■■□□ 2.19
ACAA1-219ENST00000625927 PHAXQ9H814 394 aaKnown RBP28.74■■■□□ 2.19
ACAA1-219ENST00000625927 FKBP5Q13451 457 aaPredicted RBP28.73■■■□□ 2.19
ACAA1-219ENST00000625927 PIGBQ92521 554 aa28.73■■■□□ 2.19
ACAA1-219ENST00000625927 SYTL4Q96C24 671 aaPredicted RBP28.73■■■□□ 2.19
ACAA1-219ENST00000625927 SNRPA1P09661 255 aaKnown RBP28.73■■■□□ 2.19
ACAA1-219ENST00000625927 C5P01031 1676 aa28.72■■■□□ 2.19
ACAA1-219ENST00000625927 F6X3S4 739 aa28.71■■■□□ 2.19
ACAA1-219ENST00000625927 DBF4Q9UBU7 674 aaPredicted RBP28.71■■■□□ 2.19
ACAA1-219ENST00000625927 PTCD1O75127 700 aaKnown RBP28.7■■■□□ 2.19
ACAA1-219ENST00000625927 AAMPQ13685 434 aa28.7■■■□□ 2.18
ACAA1-219ENST00000625927 SLC4A10Q6U841 1118 aa28.7■■■□□ 2.18
ACAA1-219ENST00000625927 USP16Q9Y5T5 823 aa28.7■■■□□ 2.18
ACAA1-219ENST00000625927 PAPPAQ13219 1627 aa28.69■■■□□ 2.18
ACAA1-219ENST00000625927 ITGB4P16144 1822 aa28.69■■■□□ 2.18
ACAA1-219ENST00000625927 PRIM1P49642 420 aaKnown RBP28.69■■■□□ 2.18
ACAA1-219ENST00000625927 GJD4Q96KN9 370 aaPredicted RBP28.69■■■□□ 2.18
ACAA1-219ENST00000625927 CACNA1FO60840 1977 aa28.69■■■□□ 2.18
ACAA1-219ENST00000625927 PROSER3Q2NL68 480 aa28.68■■■□□ 2.18
ACAA1-219ENST00000625927 ACSBG1Q96GR2 724 aa28.68■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms