RNA–Protein interactions for RNA: ENST00000625891.2

NRXN1-223, Transcript of neurexin 1, human

TSL 4 BASIC

Gene NRXN1, Length 1,164 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NRXN1-223	ENST00000625891	NBPF15	Q8N660	670 aa		11	□□□□□ -0.65
NRXN1-223	ENST00000625891	GLMN	Q92990	594 aa		11	□□□□□ -0.65
NRXN1-223	ENST00000625891	SPATA31C2	B4DYI2	1134 aa		10.99	□□□□□ -0.65
NRXN1-223	ENST00000625891	SOX11	P35716	441 aa		10.99	□□□□□ -0.65
NRXN1-223	ENST00000625891	SCTR	P47872	440 aa		10.99	□□□□□ -0.65
NRXN1-223	ENST00000625891	BEND7	Q8N7W2	519 aa	Predicted RBP	10.99	□□□□□ -0.65
NRXN1-223	ENST00000625891	DCAF5	Q96JK2	942 aa		10.99	□□□□□ -0.65
NRXN1-223	ENST00000625891	TRERF1	Q96PN7	1200 aa		10.99	□□□□□ -0.65
NRXN1-223	ENST00000625891	PLA2G4E	Q3MJ16	856 aa		10.98	□□□□□ -0.65
NRXN1-223	ENST00000625891	WDR44	Q5JSH3	913 aa		10.98	□□□□□ -0.65
NRXN1-223	ENST00000625891	CYP2U1	Q7Z449	544 aa		10.98	□□□□□ -0.65
NRXN1-223	ENST00000625891	NEDD1	Q8NHV4	660 aa		10.98	□□□□□ -0.65
NRXN1-223	ENST00000625891	MCCD1	P59942	119 aa	Predicted RBP	10.97	□□□□□ -0.65
NRXN1-223	ENST00000625891	EIF4G2	P78344	907 aa	Known RBP eCLIP	10.97	□□□□□ -0.65
NRXN1-223	ENST00000625891	HDGFL1	Q5TGJ6	251 aa		10.97	□□□□□ -0.65
NRXN1-223	ENST00000625891	LRRC4B	Q9NT99	713 aa		10.97	□□□□□ -0.65
NRXN1-223	ENST00000625891	ITGB2	P05107	769 aa		10.96	□□□□□ -0.65
NRXN1-223	ENST00000625891	MX2	P20592	715 aa		10.96	□□□□□ -0.65
NRXN1-223	ENST00000625891	PODN	Q7Z5L7	613 aa		10.96	□□□□□ -0.65
NRXN1-223	ENST00000625891	OSBPL3	Q9H4L5	887 aa		10.96	□□□□□ -0.65
NRXN1-223	ENST00000625891	MSTN	O14793	375 aa		10.95	□□□□□ -0.66
NRXN1-223	ENST00000625891	ARHGEF10L	Q9HCE6	1279 aa		10.95	□□□□□ -0.66
NRXN1-223	ENST00000625891	TIMMDC1	Q9NPL8	285 aa		10.95	□□□□□ -0.66
NRXN1-223	ENST00000625891	PCDHB11	Q9Y5F2	797 aa		10.95	□□□□□ -0.66
NRXN1-223	ENST00000625891	WASL	O00401	505 aa	Predicted RBP	10.94	□□□□□ -0.66
NRXN1-223	ENST00000625891	F11	P03951	625 aa		10.94	□□□□□ -0.66
NRXN1-223	ENST00000625891	TAS1R3	Q7RTX0	852 aa		10.94	□□□□□ -0.66
NRXN1-223	ENST00000625891	CCDC82	Q8N4S0	544 aa		10.94	□□□□□ -0.66
NRXN1-223	ENST00000625891	CALR3	Q96L12	384 aa	Known RBP	10.94	□□□□□ -0.66
NRXN1-223	ENST00000625891	NUCKS1	Q9H1E3	243 aa	Known RBP	10.94	□□□□□ -0.66
NRXN1-223	ENST00000625891	NSFL1C	Q9UNZ2	370 aa	Known RBP	10.94	□□□□□ -0.66
NRXN1-223	ENST00000625891	UCN2	Q96RP3	112 aa		10.93	□□□□□ -0.66
NRXN1-223	ENST00000625891	SPOCK3	Q9BQ16	436 aa		10.93	□□□□□ -0.66
NRXN1-223	ENST00000625891	OIP5	O43482	229 aa		10.92	□□□□□ -0.66
NRXN1-223	ENST00000625891	SEMA3F	Q13275	785 aa		10.92	□□□□□ -0.66
NRXN1-223	ENST00000625891	ZNF592	Q92610	1267 aa		10.92	□□□□□ -0.66
NRXN1-223	ENST00000625891	ARX	Q96QS3	562 aa		10.92	□□□□□ -0.66
NRXN1-223	ENST00000625891	THBS1	P07996	1170 aa		10.91	□□□□□ -0.66
NRXN1-223	ENST00000625891	ESF1	Q9H501	851 aa	Known RBP	10.9	□□□□□ -0.66
NRXN1-223	ENST00000625891	RAB6B	Q9NRW1	208 aa		10.9	□□□□□ -0.66
NRXN1-223	ENST00000625891	CEP126	Q9P2H0	1117 aa		10.9	□□□□□ -0.66
NRXN1-223	ENST00000625891	GNRH1	P01148	92 aa		10.89	□□□□□ -0.67
NRXN1-223	ENST00000625891	MAP2K3	P46734	347 aa		10.89	□□□□□ -0.67
NRXN1-223	ENST00000625891	PHTF2	Q8N3S3	785 aa		10.89	□□□□□ -0.67
NRXN1-223	ENST00000625891	CNKSR1	Q969H4	720 aa		10.89	□□□□□ -0.67
NRXN1-223	ENST00000625891	ESYT1	Q9BSJ8	1104 aa		10.89	□□□□□ -0.67
NRXN1-223	ENST00000625891	CFHR5	Q9BXR6	569 aa		10.89	□□□□□ -0.67
NRXN1-223	ENST00000625891	OXCT2	Q9BYC2	517 aa	Predicted RBP	10.89	□□□□□ -0.67
NRXN1-223	ENST00000625891	SERPINA10	Q9UK55	444 aa		10.89	□□□□□ -0.67
NRXN1-223	ENST00000625891	ADAM23	O75077	832 aa		10.88	□□□□□ -0.67
NRXN1-223	ENST00000625891	IL2RA	P01589	272 aa		10.88	□□□□□ -0.67
NRXN1-223	ENST00000625891	PROC	P04070	461 aa		10.88	□□□□□ -0.67
NRXN1-223	ENST00000625891	CENPC	Q03188	943 aa		10.88	□□□□□ -0.67
NRXN1-223	ENST00000625891	HRH3	Q9Y5N1	445 aa		10.87	□□□□□ -0.67
NRXN1-223	ENST00000625891	PIK3CD	O00329	1044 aa		10.86	□□□□□ -0.67
NRXN1-223	ENST00000625891	SNRPN	P63162	240 aa	Known RBP	10.86	□□□□□ -0.67
NRXN1-223	ENST00000625891	CCDC97	Q96F63	343 aa	Predicted RBP	10.86	□□□□□ -0.67
NRXN1-223	ENST00000625891	GPAM	Q9HCL2	828 aa		10.86	□□□□□ -0.67
NRXN1-223	ENST00000625891	PHKA2	P46019	1235 aa		10.85	□□□□□ -0.67
NRXN1-223	ENST00000625891	KLRG1	Q96E93	195 aa		10.85	□□□□□ -0.67
NRXN1-223	ENST00000625891	PPP1R12C	Q9BZL4	782 aa		10.85	□□□□□ -0.67
NRXN1-223	ENST00000625891	CHIC2	Q9UKJ5	165 aa		10.85	□□□□□ -0.67
NRXN1-223	ENST00000625891		A0A1B0GTH6	734 aa		10.84	□□□□□ -0.67
NRXN1-223	ENST00000625891	SHISA8	B8ZZ34	492 aa		10.84	□□□□□ -0.67
NRXN1-223	ENST00000625891	UBAP2L	Q14157	1087 aa	Known RBP	10.84	□□□□□ -0.67
NRXN1-223	ENST00000625891	CFAP70	Q5T0N1	1121 aa		10.84	□□□□□ -0.67
NRXN1-223	ENST00000625891	TBC1D9	Q6ZT07	1266 aa		10.84	□□□□□ -0.67
NRXN1-223	ENST00000625891	NFATC2IP	Q8NCF5	419 aa		10.84	□□□□□ -0.67
NRXN1-223	ENST00000625891	XAGE2	Q96GT9	111 aa		10.84	□□□□□ -0.67
NRXN1-223	ENST00000625891	ZSCAN10	Q96SZ4	725 aa	Predicted RBP	10.84	□□□□□ -0.67
NRXN1-223	ENST00000625891	CDCA7	Q9BWT1	371 aa	Predicted RBP	10.84	□□□□□ -0.67
NRXN1-223	ENST00000625891	PALM3	A6NDB9	673 aa	Predicted RBP	10.83	□□□□□ -0.68
NRXN1-223	ENST00000625891	C1orf229	Q6ZS94	237 aa	Predicted RBP	10.83	□□□□□ -0.68
NRXN1-223	ENST00000625891	CCDC85A	Q96PX6	553 aa	Predicted RBP	10.83	□□□□□ -0.68
NRXN1-223	ENST00000625891	ARID3A	Q99856	593 aa		10.83	□□□□□ -0.68
NRXN1-223	ENST00000625891	FHDC1	Q9C0D6	1143 aa	Predicted RBP	10.83	□□□□□ -0.68
NRXN1-223	ENST00000625891	PHF24	Q9UPV7	400 aa		10.83	□□□□□ -0.68
NRXN1-223	ENST00000625891	GALNT6	Q8NCL4	622 aa		10.82	□□□□□ -0.68
NRXN1-223	ENST00000625891	MYC	P01106	439 aa	Predicted RBP	10.81	□□□□□ -0.68
NRXN1-223	ENST00000625891	LBR	Q14739	615 aa	Known RBP	10.81	□□□□□ -0.68
NRXN1-223	ENST00000625891	TFIP11	Q9UBB9	837 aa	Known RBP	10.81	□□□□□ -0.68
NRXN1-223	ENST00000625891	GDF2	Q9UK05	429 aa	Predicted RBP	10.81	□□□□□ -0.68
NRXN1-223	ENST00000625891	KRBA1	A5PL33	1030 aa		10.8	□□□□□ -0.68
NRXN1-223	ENST00000625891	ATP9B	O43861	1147 aa		10.8	□□□□□ -0.68
NRXN1-223	ENST00000625891	SLFNL1	Q499Z3	407 aa		10.8	□□□□□ -0.68
NRXN1-223	ENST00000625891	MKL2	Q9ULH7	1088 aa		10.8	□□□□□ -0.68
NRXN1-223	ENST00000625891	MAFB	Q9Y5Q3	323 aa	Predicted RBP	10.8	□□□□□ -0.68
NRXN1-223	ENST00000625891	SRPK2	P78362	688 aa	Known RBP	10.79	□□□□□ -0.68
NRXN1-223	ENST00000625891	TSGA10IP	Q3SY00	556 aa		10.79	□□□□□ -0.68
NRXN1-223	ENST00000625891	C4orf17	Q53FE4	359 aa		10.79	□□□□□ -0.68
NRXN1-223	ENST00000625891	GNAS	Q5JWF2	1037 aa		10.79	□□□□□ -0.68
NRXN1-223	ENST00000625891	XP32	Q5T750	250 aa		10.79	□□□□□ -0.68
NRXN1-223	ENST00000625891	TMEM214	Q6NUQ4	689 aa	Known RBP	10.79	□□□□□ -0.68
NRXN1-223	ENST00000625891	RNF135	Q8IUD6	432 aa		10.79	□□□□□ -0.68
NRXN1-223	ENST00000625891	EDARADD	Q8WWZ3	215 aa		10.79	□□□□□ -0.68
NRXN1-223	ENST00000625891	RUBCNL	Q9H714	662 aa		10.79	□□□□□ -0.68
NRXN1-223	ENST00000625891	MSX1	P28360	303 aa		10.78	□□□□□ -0.68
NRXN1-223	ENST00000625891	GTF2E1	P29083	439 aa	Predicted RBP	10.78	□□□□□ -0.68
NRXN1-223	ENST00000625891	CSB-PGBD3	P0DP91	1061 aa		10.77	□□□□□ -0.69
NRXN1-223	ENST00000625891	SKI	P12755	728 aa		10.77	□□□□□ -0.69

Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms