RNA–Protein interactions for RNA: ENST00000625854.1

LEMD1-209, Transcript of LEM domain containing 1, humanhuman

TSL 4

Gene LEMD1, Length 516 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD1-209ENST00000625854 ATG3Q9NT62 314 aa12.1□□□□□ -0.47
LEMD1-209ENST00000625854 UTRNP46939 3433 aa12.09□□□□□ -0.47
LEMD1-209ENST00000625854 ANKRD26Q9UPS8 1709 aa12.09□□□□□ -0.47
LEMD1-209ENST00000625854 UBR3Q6ZT12 1888 aa12.09□□□□□ -0.47
LEMD1-209ENST00000625854 SSFA2P28290 1259 aa12.09□□□□□ -0.47
LEMD1-209ENST00000625854 HSP90AB1P08238 724 aaKnown RBP12.08□□□□□ -0.48
LEMD1-209ENST00000625854 CABP4P57796 275 aa12.08□□□□□ -0.48
LEMD1-209ENST00000625854 TRAPPC3LQ5T215 181 aa12.08□□□□□ -0.48
LEMD1-209ENST00000625854 ZNF530Q6P9A1 599 aaPredicted RBP12.08□□□□□ -0.48
LEMD1-209ENST00000625854 NCAPD2Q15021 1401 aa12.08□□□□□ -0.48
LEMD1-209ENST00000625854 ERVV-2B6SEH9 535 aa12.07□□□□□ -0.48
LEMD1-209ENST00000625854 MTHFSP49914 203 aa12.07□□□□□ -0.48
LEMD1-209ENST00000625854 C1orf141Q5JVX7 400 aa12.07□□□□□ -0.48
LEMD1-209ENST00000625854 ZNF526Q8TF50 670 aaPredicted RBP12.07□□□□□ -0.48
LEMD1-209ENST00000625854 RTCBQ9Y3I0 505 aaKnown RBP12.07□□□□□ -0.48
LEMD1-209ENST00000625854 KNSTRNQ9Y448 316 aa12.07□□□□□ -0.48
LEMD1-209ENST00000625854 IGSF1Q8N6C5 1336 aa12.07□□□□□ -0.48
LEMD1-209ENST00000625854 AMOTQ4VCS5 1084 aa12.06□□□□□ -0.48
LEMD1-209ENST00000625854 DCAF5Q96JK2 942 aa12.06□□□□□ -0.48
LEMD1-209ENST00000625854 PTCD1O75127 700 aaKnown RBP12.05□□□□□ -0.48
LEMD1-209ENST00000625854 MMP10P09238 476 aa12.05□□□□□ -0.48
LEMD1-209ENST00000625854 SULT6B1Q6IMI4 303 aa12.05□□□□□ -0.48
LEMD1-209ENST00000625854 AEBP1Q8IUX7 1158 aa12.05□□□□□ -0.48
LEMD1-209ENST00000625854 RFC4P35249 363 aa12.04□□□□□ -0.48
LEMD1-209ENST00000625854 NFATC2IPQ8NCF5 419 aa12.04□□□□□ -0.48
LEMD1-209ENST00000625854 GPBP1L1Q9HC44 474 aaPredicted RBP12.04□□□□□ -0.48
LEMD1-209ENST00000625854 NLGN1Q8N2Q7 840 aa12.03□□□□□ -0.48
LEMD1-209ENST00000625854 ARHGEF1Q92888 912 aaKnown RBP12.03□□□□□ -0.48
LEMD1-209ENST00000625854 SLC4A9Q96Q91 983 aa12.03□□□□□ -0.48
LEMD1-209ENST00000625854 A0A0G2JLW4 131 aa12.02□□□□□ -0.49
LEMD1-209ENST00000625854 CNGB1Q14028 1251 aaPredicted RBP12.02□□□□□ -0.49
LEMD1-209ENST00000625854 RC3H1Q5TC82 1133 aaKnown RBP12.02□□□□□ -0.49
LEMD1-209ENST00000625854 PARP3Q9Y6F1 533 aa12.02□□□□□ -0.49
LEMD1-209ENST00000625854 ATP10DQ9P241 1426 aa12.02□□□□□ -0.49
LEMD1-209ENST00000625854 GOLGB1Q14789 3259 aaKnown RBP12.01□□□□□ -0.49
LEMD1-209ENST00000625854 RPS6KA4O75676 772 aa12.01□□□□□ -0.49
LEMD1-209ENST00000625854 BCS1LQ9Y276 419 aa12.01□□□□□ -0.49
LEMD1-209ENST00000625854 N4BP2Q86UW6 1770 aaPredicted RBP12□□□□□ -0.49
LEMD1-209ENST00000625854 IL13P35225 146 aa12□□□□□ -0.49
LEMD1-209ENST00000625854 ARHGAP27Q6ZUM4 889 aa12□□□□□ -0.49
LEMD1-209ENST00000625854 CCDC87Q9NVE4 849 aa12□□□□□ -0.49
LEMD1-209ENST00000625854 KDM6AO15550 1401 aaPredicted RBP12□□□□□ -0.49
LEMD1-209ENST00000625854 HMOX1P09601 288 aa11.99□□□□□ -0.49
LEMD1-209ENST00000625854 GYS1P13807 737 aa11.99□□□□□ -0.49
LEMD1-209ENST00000625854 ADRA2BP18089 450 aa11.99□□□□□ -0.49
LEMD1-209ENST00000625854 TGFB2P61812 414 aa11.99□□□□□ -0.49
LEMD1-209ENST00000625854 CC2D1BQ5T0F9 858 aaKnown RBP11.99□□□□□ -0.49
LEMD1-209ENST00000625854 CNTNAP4Q9C0A0 1308 aa11.99□□□□□ -0.49
LEMD1-209ENST00000625854 MYH14Q7Z406 1995 aaKnown RBP11.99□□□□□ -0.49
LEMD1-209ENST00000625854 KDRP35968 1356 aa11.98□□□□□ -0.49
LEMD1-209ENST00000625854 FCHSD2O94868 740 aa11.98□□□□□ -0.49
LEMD1-209ENST00000625854 DPEP1P16444 411 aa11.98□□□□□ -0.49
LEMD1-209ENST00000625854 CRKLP46109 303 aaKnown RBP11.98□□□□□ -0.49
LEMD1-209ENST00000625854 LGR6Q9HBX8 967 aa11.98□□□□□ -0.49
LEMD1-209ENST00000625854 SRP68Q9UHB9 627 aaKnown RBP11.98□□□□□ -0.49
LEMD1-209ENST00000625854 CICQ96RK0 1608 aaPredicted RBP11.97□□□□□ -0.49
LEMD1-209ENST00000625854 PLEKHG2Q9H7P9 1386 aa11.97□□□□□ -0.49
LEMD1-209ENST00000625854 AKAP4Q5JQC9 854 aa11.97□□□□□ -0.49
LEMD1-209ENST00000625854 AMER1Q5JTC6 1135 aaPredicted RBP11.97□□□□□ -0.49
LEMD1-209ENST00000625854 COL5A3P25940 1745 aaPredicted RBP11.97□□□□□ -0.49
LEMD1-209ENST00000625854 KIF7Q2M1P5 1343 aa11.96□□□□□ -0.49
LEMD1-209ENST00000625854 SLC39A6Q13433 755 aa11.96□□□□□ -0.49
LEMD1-209ENST00000625854 SCN11AQ9UI33 1791 aa11.96□□□□□ -0.49
LEMD1-209ENST00000625854 ZNF831Q5JPB2 1677 aa11.95□□□□□ -0.5
LEMD1-209ENST00000625854 DIAPH1O60610 1272 aaKnown RBP11.95□□□□□ -0.5
LEMD1-209ENST00000625854 ZPR1O75312 459 aa11.95□□□□□ -0.5
LEMD1-209ENST00000625854 FKBP8Q14318 412 aa11.95□□□□□ -0.5
LEMD1-209ENST00000625854 INTS5Q6P9B9 1019 aaKnown RBP11.95□□□□□ -0.5
LEMD1-209ENST00000625854 DNAJC10Q8IXB1 793 aa11.95□□□□□ -0.5
LEMD1-209ENST00000625854 SLC52A2Q9HAB3 445 aa11.95□□□□□ -0.5
LEMD1-209ENST00000625854 KIF13BQ9NQT8 1826 aa11.95□□□□□ -0.5
LEMD1-209ENST00000625854 PXDNLA1KZ92 1463 aa11.95□□□□□ -0.5
LEMD1-209ENST00000625854 RNMTO43148 476 aaKnown RBP11.94□□□□□ -0.5
LEMD1-209ENST00000625854 PIM2Q9P1W9 311 aa11.94□□□□□ -0.5
LEMD1-209ENST00000625854 VIRMAQ69YN4 1812 aaKnown RBP11.94□□□□□ -0.5
LEMD1-209ENST00000625854 C4AP0C0L4 1744 aa11.94□□□□□ -0.5
LEMD1-209ENST00000625854 U2SURPO15042 1029 aaKnown RBP11.93□□□□□ -0.5
LEMD1-209ENST00000625854 MTHFSDQ2M296 383 aaKnown RBP11.93□□□□□ -0.5
LEMD1-209ENST00000625854 USPL1Q5W0Q7 1092 aa11.93□□□□□ -0.5
LEMD1-209ENST00000625854 ADCY9O60503 1353 aa11.92□□□□□ -0.5
LEMD1-209ENST00000625854 USP42Q9H9J4 1324 aaKnown RBP11.92□□□□□ -0.5
LEMD1-209ENST00000625854 HSPA6P17066 643 aa11.92□□□□□ -0.5
LEMD1-209ENST00000625854 DALRD3Q5D0E6 543 aaKnown RBP11.92□□□□□ -0.5
LEMD1-209ENST00000625854 C10orf71Q711Q0 1435 aa11.92□□□□□ -0.5
LEMD1-209ENST00000625854 PER1O15534 1290 aaPredicted RBP11.91□□□□□ -0.5
LEMD1-209ENST00000625854 CYP19A1P11511 503 aaPredicted RBP11.91□□□□□ -0.5
LEMD1-209ENST00000625854 KCNA3P22001 575 aa11.91□□□□□ -0.5
LEMD1-209ENST00000625854 CANXP27824 592 aaKnown RBP11.91□□□□□ -0.5
LEMD1-209ENST00000625854 CHRNA5P30532 468 aa11.91□□□□□ -0.5
LEMD1-209ENST00000625854 DDR1Q08345 913 aa11.91□□□□□ -0.5
LEMD1-209ENST00000625854 TJP1Q07157 1748 aa11.91□□□□□ -0.5
LEMD1-209ENST00000625854 KIAA1551Q9HCM1 1747 aa11.91□□□□□ -0.5
LEMD1-209ENST00000625854 KIF3CO14782 793 aa11.9□□□□□ -0.5
LEMD1-209ENST00000625854 TM4SF1P30408 202 aa11.9□□□□□ -0.5
LEMD1-209ENST00000625854 C9orf131Q5VYM1 1079 aa11.9□□□□□ -0.5
LEMD1-209ENST00000625854 TTC5Q8N0Z6 440 aa11.9□□□□□ -0.5
LEMD1-209ENST00000625854 POLRMTO00411 1230 aaKnown RBP11.89□□□□□ -0.51
LEMD1-209ENST00000625854 TEFQ10587 303 aa11.89□□□□□ -0.51
LEMD1-209ENST00000625854 BICDL1Q6ZP65 573 aa11.89□□□□□ -0.51
LEMD1-209ENST00000625854 C16orf71Q8IYS4 520 aaPredicted RBP11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 138 ms