RNA–Protein interactions for RNA: ENST00000625810.2

ATG4B-226, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4 BASIC

Gene ATG4B, Length 370 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-226ENST00000625810 YBX3P16989 372 aaKnown RBP eCLIP26.14■■□□□ 1.78
ATG4B-226ENST00000625810 KDRP35968 1356 aa26.13■■□□□ 1.77
ATG4B-226ENST00000625810 SSFA2P28290 1259 aa26.13■■□□□ 1.77
ATG4B-226ENST00000625810 AMOTQ4VCS5 1084 aa26.13■■□□□ 1.77
ATG4B-226ENST00000625810 ATP6V1AP38606 617 aa26.12■■□□□ 1.77
ATG4B-226ENST00000625810 AMER1Q5JTC6 1135 aaPredicted RBP26.12■■□□□ 1.77
ATG4B-226ENST00000625810 ZNF530Q6P9A1 599 aaPredicted RBP26.12■■□□□ 1.77
ATG4B-226ENST00000625810 CD2APQ9Y5K6 639 aa26.12■■□□□ 1.77
ATG4B-226ENST00000625810 KDM6AO15550 1401 aaPredicted RBP26.12■■□□□ 1.77
ATG4B-226ENST00000625810 AEBP1Q8IUX7 1158 aa26.11■■□□□ 1.77
ATG4B-226ENST00000625810 DCAF5Q96JK2 942 aa26.11■■□□□ 1.77
ATG4B-226ENST00000625810 ERVV-2B6SEH9 535 aa26.1■■□□□ 1.77
ATG4B-226ENST00000625810 GNPATO15228 680 aa26.1■■□□□ 1.77
ATG4B-226ENST00000625810 SULT6B1Q6IMI4 303 aa26.1■■□□□ 1.77
ATG4B-226ENST00000625810 C1orf141Q5JVX7 400 aa26.08■■□□□ 1.77
ATG4B-226ENST00000625810 ZNF831Q5JPB2 1677 aa26.08■■□□□ 1.77
ATG4B-226ENST00000625810 GRIN3BO60391 1043 aa26.07■■□□□ 1.76
ATG4B-226ENST00000625810 IL13P35225 146 aa26.07■■□□□ 1.76
ATG4B-226ENST00000625810 CABP4P57796 275 aa26.07■■□□□ 1.76
ATG4B-226ENST00000625810 SLC4A9Q96Q91 983 aa26.07■■□□□ 1.76
ATG4B-226ENST00000625810 MTHFSP49914 203 aa26.06■■□□□ 1.76
ATG4B-226ENST00000625810 RBM42Q9BTD8 480 aaKnown RBP26.05■■□□□ 1.76
ATG4B-226ENST00000625810 CC2D1BQ5T0F9 858 aaKnown RBP26.04■■□□□ 1.76
ATG4B-226ENST00000625810 COL5A3P25940 1745 aaPredicted RBP26.03■■□□□ 1.76
ATG4B-226ENST00000625810 PER1O15534 1290 aaPredicted RBP26.03■■□□□ 1.76
ATG4B-226ENST00000625810 CNGB1Q14028 1251 aaPredicted RBP26■■□□□ 1.75
ATG4B-226ENST00000625810 CNTNAP4Q9C0A0 1308 aa25.99■■□□□ 1.75
ATG4B-226ENST00000625810 RTCBQ9Y3I0 505 aaKnown RBP25.99■■□□□ 1.75
ATG4B-226ENST00000625810 C1QTNF8P60827 252 aa25.98■■□□□ 1.75
ATG4B-226ENST00000625810 RC3H1Q5TC82 1133 aaKnown RBP25.98■■□□□ 1.75
ATG4B-226ENST00000625810 NFATC2IPQ8NCF5 419 aa25.98■■□□□ 1.75
ATG4B-226ENST00000625810 MMP10P09238 476 aa25.97■■□□□ 1.75
ATG4B-226ENST00000625810 HMOX1P09601 288 aa25.97■■□□□ 1.75
ATG4B-226ENST00000625810 TRAPPC3LQ5T215 181 aa25.97■■□□□ 1.75
ATG4B-226ENST00000625810 DIAPH1O60610 1272 aaKnown RBP25.96■■□□□ 1.75
ATG4B-226ENST00000625810 PTCD1O75127 700 aaKnown RBP25.95■■□□□ 1.74
ATG4B-226ENST00000625810 ADRA2BP18089 450 aa25.95■■□□□ 1.74
ATG4B-226ENST00000625810 AKAP4Q5JQC9 854 aa25.95■■□□□ 1.74
ATG4B-226ENST00000625810 SCN11AQ9UI33 1791 aa25.95■■□□□ 1.74
ATG4B-226ENST00000625810 GIGYF1O75420 1035 aaPredicted RBP25.94■■□□□ 1.74
ATG4B-226ENST00000625810 ARHGEF1Q92888 912 aaKnown RBP25.94■■□□□ 1.74
ATG4B-226ENST00000625810 WWC3Q9ULE0 1092 aa25.94■■□□□ 1.74
ATG4B-226ENST00000625810 CICQ96RK0 1608 aaPredicted RBP25.94■■□□□ 1.74
ATG4B-226ENST00000625810 MYH14Q7Z406 1995 aaKnown RBP25.93■■□□□ 1.74
ATG4B-226ENST00000625810 RPS6KA4O75676 772 aa25.93■■□□□ 1.74
ATG4B-226ENST00000625810 C4AP0C0L4 1744 aa25.93■■□□□ 1.74
ATG4B-226ENST00000625810 TJP1Q07157 1748 aa25.93■■□□□ 1.74
ATG4B-226ENST00000625810 ATP10DQ9P241 1426 aa25.92■■□□□ 1.74
ATG4B-226ENST00000625810 KIF13BQ9NQT8 1826 aa25.92■■□□□ 1.74
ATG4B-226ENST00000625810 KIAA1551Q9HCM1 1747 aa25.91■■□□□ 1.74
ATG4B-226ENST00000625810 NLGN1Q8N2Q7 840 aa25.91■■□□□ 1.74
ATG4B-226ENST00000625810 ADCY9O60503 1353 aa25.91■■□□□ 1.74
ATG4B-226ENST00000625810 NPC1L1Q9UHC9 1359 aa25.91■■□□□ 1.74
ATG4B-226ENST00000625810 PXDNLA1KZ92 1463 aa25.91■■□□□ 1.74
ATG4B-226ENST00000625810 GYS1P13807 737 aa25.9■■□□□ 1.74
ATG4B-226ENST00000625810 C10orf71Q711Q0 1435 aa25.89■■□□□ 1.74
ATG4B-226ENST00000625810 RFC4P35249 363 aa25.89■■□□□ 1.74
ATG4B-226ENST00000625810 LGR6Q9HBX8 967 aa25.89■■□□□ 1.74
ATG4B-226ENST00000625810 MRC1P22897 1456 aa25.89■■□□□ 1.73
ATG4B-226ENST00000625810 SENP3-EIF4A1A0A087X0R7 540 aa25.88■■□□□ 1.73
ATG4B-226ENST00000625810 CRKLP46109 303 aaKnown RBP25.88■■□□□ 1.73
ATG4B-226ENST00000625810 SLC52A2Q9HAB3 445 aa25.88■■□□□ 1.73
ATG4B-226ENST00000625810 U2SURPO15042 1029 aaKnown RBP25.87■■□□□ 1.73
ATG4B-226ENST00000625810 RNMTO43148 476 aaKnown RBP25.87■■□□□ 1.73
ATG4B-226ENST00000625810 MTHFSDQ2M296 383 aaKnown RBP25.86■■□□□ 1.73
ATG4B-226ENST00000625810 ADAMTS7Q9UKP4 1686 aa25.85■■□□□ 1.73
ATG4B-226ENST00000625810 COL3A1P02461 1466 aaPredicted RBP25.85■■□□□ 1.73
ATG4B-226ENST00000625810 N4BP2Q86UW6 1770 aaPredicted RBP25.84■■□□□ 1.73
ATG4B-226ENST00000625810 TGFB2P61812 414 aa25.84■■□□□ 1.73
ATG4B-226ENST00000625810 INTS5Q6P9B9 1019 aaKnown RBP25.83■■□□□ 1.73
ATG4B-226ENST00000625810 CCDC87Q9NVE4 849 aa25.83■■□□□ 1.73
ATG4B-226ENST00000625810 SRP68Q9UHB9 627 aaKnown RBP25.83■■□□□ 1.73
ATG4B-226ENST00000625810 USP42Q9H9J4 1324 aaKnown RBP25.83■■□□□ 1.73
ATG4B-226ENST00000625810 PARP3Q9Y6F1 533 aa25.82■■□□□ 1.72
ATG4B-226ENST00000625810 KCPQ6ZWJ8 1503 aa25.82■■□□□ 1.72
ATG4B-226ENST00000625810 VIRMAQ69YN4 1812 aaKnown RBP25.81■■□□□ 1.72
ATG4B-226ENST00000625810 A0A0G2JLW4 131 aa25.81■■□□□ 1.72
ATG4B-226ENST00000625810 SLC39A6Q13433 755 aa25.81■■□□□ 1.72
ATG4B-226ENST00000625810 DNAJC10Q8IXB1 793 aa25.81■■□□□ 1.72
ATG4B-226ENST00000625810 FKBP8Q14318 412 aa25.8■■□□□ 1.72
ATG4B-226ENST00000625810 CFAP53Q96M91 514 aa25.8■■□□□ 1.72
ATG4B-226ENST00000625810 GPBP1L1Q9HC44 474 aaPredicted RBP25.79■■□□□ 1.72
ATG4B-226ENST00000625810 DPEP1P16444 411 aa25.78■■□□□ 1.72
ATG4B-226ENST00000625810 DDR1Q08345 913 aa25.77■■□□□ 1.72
ATG4B-226ENST00000625810 ZNF526Q8TF50 670 aaPredicted RBP25.77■■□□□ 1.72
ATG4B-226ENST00000625810 BCS1LQ9Y276 419 aa25.77■■□□□ 1.72
ATG4B-226ENST00000625810 SOS1Q07889 1333 aaPredicted RBP25.77■■□□□ 1.72
ATG4B-226ENST00000625810 BRCA1P38398 1863 aaKnown RBP25.77■■□□□ 1.72
ATG4B-226ENST00000625810 CYP19A1P11511 503 aaPredicted RBP25.76■■□□□ 1.71
ATG4B-226ENST00000625810 GAS2L2Q8NHY3 880 aa25.76■■□□□ 1.71
ATG4B-226ENST00000625810 UBR2Q8IWV8 1755 aa25.74■■□□□ 1.71
ATG4B-226ENST00000625810 GNAT3A8MTJ3 354 aa25.74■■□□□ 1.71
ATG4B-226ENST00000625810 TTC5Q8N0Z6 440 aa25.74■■□□□ 1.71
ATG4B-226ENST00000625810 NUDCQ9Y266 331 aa25.74■■□□□ 1.71
ATG4B-226ENST00000625810 KCNA3P22001 575 aa25.73■■□□□ 1.71
ATG4B-226ENST00000625810 TEFQ10587 303 aa25.73■■□□□ 1.71
ATG4B-226ENST00000625810 ZPR1O75312 459 aa25.72■■□□□ 1.71
ATG4B-226ENST00000625810 USPL1Q5W0Q7 1092 aa25.72■■□□□ 1.71
ATG4B-226ENST00000625810 POLRMTO00411 1230 aaKnown RBP25.71■■□□□ 1.71
ATG4B-226ENST00000625810 FCHSD2O94868 740 aa25.71■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms