RNA–Protein interactions for RNA: ENST00000622132.4

ABCB1-211, Transcript of ATP binding cassette subfamily B member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCB1, Length 4,778 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCB1-211ENST00000622132 KRT24Q2M2I5 525 aa10.58□□□□□ -0.72
ABCB1-211ENST00000622132 CLASRPQ8N2M8 674 aaKnown RBP10.58□□□□□ -0.72
ABCB1-211ENST00000622132 BCL11BQ9C0K0 894 aaPredicted RBP10.57□□□□□ -0.72
ABCB1-211ENST00000622132 ERBB3P21860 1342 aa10.57□□□□□ -0.72
ABCB1-211ENST00000622132 AK7Q96M32 723 aa10.57□□□□□ -0.72
ABCB1-211ENST00000622132 TECPR2O15040 1411 aa10.57□□□□□ -0.72
ABCB1-211ENST00000622132 TRIM27P14373 513 aa10.57□□□□□ -0.72
ABCB1-211ENST00000622132 CHPF2Q9P2E5 772 aa10.57□□□□□ -0.72
ABCB1-211ENST00000622132 PPP1R1BQ9UD71 204 aaPredicted RBP10.57□□□□□ -0.72
ABCB1-211ENST00000622132 QRICH2Q9H0J4 1663 aa10.57□□□□□ -0.72
ABCB1-211ENST00000622132 PI4KAP2A4QPH2 592 aa10.57□□□□□ -0.72
ABCB1-211ENST00000622132 SRGAP3O43295 1099 aa10.57□□□□□ -0.72
ABCB1-211ENST00000622132 PI4KAP1Q8N8J0 262 aa10.57□□□□□ -0.72
ABCB1-211ENST00000622132 CARD10Q9BWT7 1032 aa10.57□□□□□ -0.72
ABCB1-211ENST00000622132 TRIM35Q9UPQ4 493 aa10.57□□□□□ -0.72
ABCB1-211ENST00000622132 PTPRCP08575 1304 aa10.57□□□□□ -0.72
ABCB1-211ENST00000622132 C20orf194Q5TEA3 1177 aa10.56□□□□□ -0.72
ABCB1-211ENST00000622132 TSPYL6Q8N831 410 aa10.56□□□□□ -0.72
ABCB1-211ENST00000622132 RTL1A6NKG5 1358 aa10.56□□□□□ -0.72
ABCB1-211ENST00000622132 CCDC57Q2TAC2 916 aa10.56□□□□□ -0.72
ABCB1-211ENST00000622132 WDR17Q8IZU2 1322 aa10.56□□□□□ -0.72
ABCB1-211ENST00000622132 BCORL1Q5H9F3 1711 aa10.56□□□□□ -0.72
ABCB1-211ENST00000622132 HSP90AB3PQ58FF7 597 aa10.56□□□□□ -0.72
ABCB1-211ENST00000622132 CNNM1Q9NRU3 951 aa10.56□□□□□ -0.72
ABCB1-211ENST00000622132 PRIM1P49642 420 aaKnown RBP10.56□□□□□ -0.72
ABCB1-211ENST00000622132 ZNF790Q6PG37 636 aa10.56□□□□□ -0.72
ABCB1-211ENST00000622132 CCDC85AQ96PX6 553 aaPredicted RBP10.56□□□□□ -0.72
ABCB1-211ENST00000622132 SIL1Q9H173 461 aa10.56□□□□□ -0.72
ABCB1-211ENST00000622132 KIF24Q5T7B8 1368 aa10.56□□□□□ -0.72
ABCB1-211ENST00000622132 ADGRB1O14514 1584 aa10.55□□□□□ -0.72
ABCB1-211ENST00000622132 IGSF1Q8N6C5 1336 aa10.55□□□□□ -0.72
ABCB1-211ENST00000622132 HSP90AA2PQ14568 343 aaPredicted RBP10.55□□□□□ -0.72
ABCB1-211ENST00000622132 SPINK5Q9NQ38 1064 aaPredicted RBP10.55□□□□□ -0.72
ABCB1-211ENST00000622132 SLIT1O75093 1534 aa10.55□□□□□ -0.72
ABCB1-211ENST00000622132 GPTP24298 496 aa10.55□□□□□ -0.72
ABCB1-211ENST00000622132 PIP4K2AP48426 406 aaPredicted RBP10.55□□□□□ -0.72
ABCB1-211ENST00000622132 ANKRD13DQ6ZTN6 518 aa10.55□□□□□ -0.72
ABCB1-211ENST00000622132 TAOK2Q9UL54 1235 aa10.55□□□□□ -0.72
ABCB1-211ENST00000622132 MAP3K2Q9Y2U5 619 aa10.55□□□□□ -0.72
ABCB1-211ENST00000622132 ARHGAP23Q9P227 1491 aa10.55□□□□□ -0.72
ABCB1-211ENST00000622132 COPS6Q7L5N1 327 aa10.55□□□□□ -0.72
ABCB1-211ENST00000622132 MROH2AA6NES4 1674 aa10.55□□□□□ -0.72
ABCB1-211ENST00000622132 TNS3Q68CZ2 1445 aa10.55□□□□□ -0.72
ABCB1-211ENST00000622132 VAMP4O75379 141 aa10.54□□□□□ -0.72
ABCB1-211ENST00000622132 LRRFIP1Q32MZ4 808 aaKnown RBP10.54□□□□□ -0.72
ABCB1-211ENST00000622132 XAGE3Q8WTP9 111 aa10.54□□□□□ -0.72
ABCB1-211ENST00000622132 MPHOSPH8Q99549 860 aa10.54□□□□□ -0.72
ABCB1-211ENST00000622132 SLC52A2Q9HAB3 445 aa10.54□□□□□ -0.72
ABCB1-211ENST00000622132 TRPC5Q9UL62 973 aaPredicted RBP10.54□□□□□ -0.72
ABCB1-211ENST00000622132 NEURL4Q96JN8 1562 aa10.54□□□□□ -0.72
ABCB1-211ENST00000622132 ERC2O15083 957 aa10.54□□□□□ -0.72
ABCB1-211ENST00000622132 RPAP2Q8IXW5 612 aaPredicted RBP10.54□□□□□ -0.72
ABCB1-211ENST00000622132 QTRT2Q9H974 415 aaKnown RBP10.54□□□□□ -0.72
ABCB1-211ENST00000622132 DIAPH3Q9NSV4 1193 aa10.54□□□□□ -0.72
ABCB1-211ENST00000622132 A0A087WZG4 1122 aa10.54□□□□□ -0.72
ABCB1-211ENST00000622132 ATP5J2-PTCD1G3V325 749 aa10.54□□□□□ -0.72
ABCB1-211ENST00000622132 PHF14O94880 888 aa10.54□□□□□ -0.72
ABCB1-211ENST00000622132 GCC1Q96CN9 775 aa10.54□□□□□ -0.72
ABCB1-211ENST00000622132 TRMT112Q9UI30 125 aaKnown RBP10.54□□□□□ -0.72
ABCB1-211ENST00000622132 CHL1O00533 1208 aa10.54□□□□□ -0.72
ABCB1-211ENST00000622132 PHKG2P15735 406 aa10.54□□□□□ -0.72
ABCB1-211ENST00000622132 ERC1Q8IUD2 1116 aa10.53□□□□□ -0.72
ABCB1-211ENST00000622132 NOP58Q9Y2X3 529 aaKnown RBP10.53□□□□□ -0.72
ABCB1-211ENST00000622132 CPSF1Q10570 1443 aaKnown RBP10.53□□□□□ -0.72
ABCB1-211ENST00000622132 CDC42BPGQ6DT37 1551 aa10.53□□□□□ -0.72
ABCB1-211ENST00000622132 RFC4P35249 363 aa10.53□□□□□ -0.72
ABCB1-211ENST00000622132 IL17REQ8NFR9 667 aa10.53□□□□□ -0.72
ABCB1-211ENST00000622132 BABAM1Q9NWV8 329 aa10.53□□□□□ -0.72
ABCB1-211ENST00000622132 AXIN2Q9Y2T1 843 aa10.53□□□□□ -0.72
ABCB1-211ENST00000622132 HSCBQ8IWL3 235 aa10.53□□□□□ -0.72
ABCB1-211ENST00000622132 FBXW7Q969H0 707 aa10.52□□□□□ -0.72
ABCB1-211ENST00000622132 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.52□□□□□ -0.723e-6■■□□□ 11.6
ABCB1-211ENST00000622132 PDZRN3Q9UPQ7 1066 aa10.52□□□□□ -0.73
ABCB1-211ENST00000622132 DIP2AQ14689 1571 aa10.52□□□□□ -0.73
ABCB1-211ENST00000622132 KIAA1210Q9ULL0 1709 aa10.52□□□□□ -0.73
ABCB1-211ENST00000622132 ARHGAP45Q92619 1136 aa10.52□□□□□ -0.73
ABCB1-211ENST00000622132 PPLO60437 1756 aa10.52□□□□□ -0.73
ABCB1-211ENST00000622132 USP31Q70CQ4 1352 aa10.52□□□□□ -0.73
ABCB1-211ENST00000622132 FAM161AQ3B820 660 aa10.52□□□□□ -0.73
ABCB1-211ENST00000622132 ISY1Q9ULR0 285 aaKnown RBP10.52□□□□□ -0.73
ABCB1-211ENST00000622132 UNC5CLQ8IV45 518 aa10.51□□□□□ -0.73
ABCB1-211ENST00000622132 MRPL50Q8N5N7 158 aaKnown RBP10.51□□□□□ -0.73
ABCB1-211ENST00000622132 PLEKHF1Q96S99 279 aa10.51□□□□□ -0.73
ABCB1-211ENST00000622132 ERVV-2B6SEH9 535 aa10.51□□□□□ -0.73
ABCB1-211ENST00000622132 RUFY2Q8WXA3 655 aa10.51□□□□□ -0.73
ABCB1-211ENST00000622132 LRRCC1Q9C099 1032 aa10.51□□□□□ -0.73
ABCB1-211ENST00000622132 CEP126Q9P2H0 1117 aa10.51□□□□□ -0.73
ABCB1-211ENST00000622132 CDK12Q9NYV4 1490 aaPredicted RBP10.51□□□□□ -0.73
ABCB1-211ENST00000622132 UBE3BQ7Z3V4 1068 aa10.5□□□□□ -0.73
ABCB1-211ENST00000622132 ZNF496Q96IT1 587 aaPredicted RBP10.5□□□□□ -0.73
ABCB1-211ENST00000622132 TOMM22Q9NS69 142 aa10.5□□□□□ -0.73
ABCB1-211ENST00000622132 CWC25Q9NXE8 425 aaPredicted RBP10.5□□□□□ -0.73
ABCB1-211ENST00000622132 LRRFIP2Q9Y608 721 aaKnown RBP10.5□□□□□ -0.73
ABCB1-211ENST00000622132 C3P01024 1663 aa10.5□□□□□ -0.73
ABCB1-211ENST00000622132 NCOA3Q9Y6Q9 1424 aa10.5□□□□□ -0.73
ABCB1-211ENST00000622132 NCBP3Q53F19 620 aaKnown RBP10.5□□□□□ -0.73
ABCB1-211ENST00000622132 EXOC6BQ9Y2D4 811 aa10.5□□□□□ -0.73
ABCB1-211ENST00000622132 KSR2Q6VAB6 950 aa10.5□□□□□ -0.73
ABCB1-211ENST00000622132 TBC1D2BQ9UPU7 963 aa10.5□□□□□ -0.73
ABCB1-211ENST00000622132 ZNF772Q68DY9 489 aaPredicted RBP10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms