RNA–Protein interactions for RNA: ENST00000621266.4

COL4A6-210, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,627 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-210ENST00000621266 GAS2L2Q8NHY3 880 aa11.56□□□□□ -0.56
COL4A6-210ENST00000621266 IKQ13123 557 aaPredicted RBP11.56□□□□□ -0.56
COL4A6-210ENST00000621266 RSPH14Q9UHP6 348 aa11.56□□□□□ -0.56
COL4A6-210ENST00000621266 UNC13AQ9UPW8 1703 aa11.56□□□□□ -0.56
COL4A6-210ENST00000621266 SURF6O75683 361 aaKnown RBP11.55□□□□□ -0.56
COL4A6-210ENST00000621266 PPP2R1AP30153 589 aa11.55□□□□□ -0.56
COL4A6-210ENST00000621266 USP25Q9UHP3 1055 aa11.55□□□□□ -0.56
COL4A6-210ENST00000621266 CDK13Q14004 1512 aaKnown RBP11.55□□□□□ -0.56
COL4A6-210ENST00000621266 SSR1P43307 286 aaKnown RBP11.55□□□□□ -0.56
COL4A6-210ENST00000621266 CCDC178Q5BJE1 867 aa11.55□□□□□ -0.56
COL4A6-210ENST00000621266 RPGRIP1LQ68CZ1 1315 aa11.55□□□□□ -0.56
COL4A6-210ENST00000621266 SMC1AQ14683 1233 aaKnown RBP11.55□□□□□ -0.56
COL4A6-210ENST00000621266 TCP11L2Q8N4U5 519 aa11.55□□□□□ -0.56
COL4A6-210ENST00000621266 CABP1Q9NZU7 370 aa11.55□□□□□ -0.56
COL4A6-210ENST00000621266 FBXO31Q5XUX0 539 aaPredicted RBP11.55□□□□□ -0.56
COL4A6-210ENST00000621266 MCM3P25205 808 aa11.54□□□□□ -0.56
COL4A6-210ENST00000621266 ERBINQ96RT1 1412 aa11.54□□□□□ -0.56
COL4A6-210ENST00000621266 BMS1Q14692 1282 aaKnown RBP11.54□□□□□ -0.56
COL4A6-210ENST00000621266 LUZP1Q86V48 1076 aa11.54□□□□□ -0.56
COL4A6-210ENST00000621266 ZNF692Q9BU19 519 aaPredicted RBP11.54□□□□□ -0.56
COL4A6-210ENST00000621266 ARHGEF11O15085 1522 aa11.54□□□□□ -0.56
COL4A6-210ENST00000621266 EPRSP07814 1512 aaKnown RBP11.54□□□□□ -0.56
COL4A6-210ENST00000621266 TDO2P48775 406 aa11.54□□□□□ -0.56
COL4A6-210ENST00000621266 HSPA2P54652 639 aa11.54□□□□□ -0.56
COL4A6-210ENST00000621266 MICALL1Q8N3F8 863 aa11.54□□□□□ -0.56
COL4A6-210ENST00000621266 C8orf37Q96NL8 207 aa11.54□□□□□ -0.56
COL4A6-210ENST00000621266 CIZ1Q9ULV3 898 aaPredicted RBP11.54□□□□□ -0.56
COL4A6-210ENST00000621266 CCDC160A6NGH7 325 aa11.53□□□□□ -0.56
COL4A6-210ENST00000621266 IGSF3O75054 1194 aa11.53□□□□□ -0.56
COL4A6-210ENST00000621266 STAMBPO95630 424 aa11.53□□□□□ -0.56
COL4A6-210ENST00000621266 SUPT6HQ7KZ85 1726 aaKnown RBP11.53□□□□□ -0.56
COL4A6-210ENST00000621266 SPG7Q9UQ90 795 aa11.53□□□□□ -0.56
COL4A6-210ENST00000621266 RTEL1-TNFRSF6BF6WH68 1400 aa11.53□□□□□ -0.56
COL4A6-210ENST00000621266 ANKRD30BQ9BXX2 1392 aa11.53□□□□□ -0.56
COL4A6-210ENST00000621266 BCAR3O75815 825 aa11.53□□□□□ -0.56
COL4A6-210ENST00000621266 KRT222Q8N1A0 295 aa11.53□□□□□ -0.56
COL4A6-210ENST00000621266 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.53□□□□□ -0.56
COL4A6-210ENST00000621266 PRKAR2BP31323 418 aa11.53□□□□□ -0.56
COL4A6-210ENST00000621266 WAPLQ7Z5K2 1190 aa11.53□□□□□ -0.56
COL4A6-210ENST00000621266 PUS7Q96PZ0 661 aaKnown RBP11.53□□□□□ -0.56
COL4A6-210ENST00000621266 WWC3Q9ULE0 1092 aa11.53□□□□□ -0.56
COL4A6-210ENST00000621266 LIG1P18858 919 aa11.52□□□□□ -0.56
COL4A6-210ENST00000621266 SLC12A5Q9H2X9 1139 aa11.52□□□□□ -0.56
COL4A6-210ENST00000621266 IQGAP2Q13576 1575 aa11.52□□□□□ -0.56
COL4A6-210ENST00000621266 GCOM1H8Y6P7 765 aaPredicted RBP11.52□□□□□ -0.56
COL4A6-210ENST00000621266 MYZAPP0CAP1 466 aa11.52□□□□□ -0.56
COL4A6-210ENST00000621266 SPA17Q15506 151 aa11.52□□□□□ -0.56
COL4A6-210ENST00000621266 NBPF8Q3BBV2 869 aa11.52□□□□□ -0.56
COL4A6-210ENST00000621266 ZBTB9Q96C00 473 aa11.52□□□□□ -0.56
COL4A6-210ENST00000621266 RRS1Q15050 365 aaKnown RBP11.52□□□□□ -0.57
COL4A6-210ENST00000621266 ANKRD1Q15327 319 aa11.52□□□□□ -0.57
COL4A6-210ENST00000621266 ZSWIM4Q9H7M6 989 aa11.52□□□□□ -0.57
COL4A6-210ENST00000621266 PDRG1Q9NUG6 133 aa11.52□□□□□ -0.57
COL4A6-210ENST00000621266 TTC31Q49AM3 519 aaPredicted RBP11.52□□□□□ -0.57
COL4A6-210ENST00000621266 SPECC1Q5M775 1068 aa11.52□□□□□ -0.57
COL4A6-210ENST00000621266 CCDC183Q5T5S1 534 aa11.52□□□□□ -0.57
COL4A6-210ENST00000621266 GCC1Q96CN9 775 aa11.52□□□□□ -0.57
COL4A6-210ENST00000621266 NOB1Q9ULX3 412 aaKnown RBP11.52□□□□□ -0.57
COL4A6-210ENST00000621266 GIGYF2Q6Y7W6 1299 aaKnown RBP11.51□□□□□ -0.57
COL4A6-210ENST00000621266 MAATS1Q7Z4T9 603 aa11.51□□□□□ -0.57
COL4A6-210ENST00000621266 ZNF397Q8NF99 534 aaPredicted RBP11.51□□□□□ -0.57
COL4A6-210ENST00000621266 HIP1O00291 1037 aa11.51□□□□□ -0.57
COL4A6-210ENST00000621266 CEP135Q66GS9 1140 aa11.51□□□□□ -0.57
COL4A6-210ENST00000621266 CEP57Q86XR8 500 aa11.51□□□□□ -0.57
COL4A6-210ENST00000621266 PPM1EQ8WY54 764 aa11.51□□□□□ -0.57
COL4A6-210ENST00000621266 TMCO5BA8MYB1 307 aa11.51□□□□□ -0.57
COL4A6-210ENST00000621266 C11orf95C9JLR9 678 aaPredicted RBP11.51□□□□□ -0.57
COL4A6-210ENST00000621266 TOP1P11387 765 aaKnown RBP11.51□□□□□ -0.57
COL4A6-210ENST00000621266 ATP2B2Q01814 1243 aa11.51□□□□□ -0.57
COL4A6-210ENST00000621266 GRM1Q13255 1194 aa11.51□□□□□ -0.57
COL4A6-210ENST00000621266 HSPA4P34932 840 aa11.51□□□□□ -0.57
COL4A6-210ENST00000621266 IMMTQ16891 758 aaKnown RBP11.51□□□□□ -0.57
COL4A6-210ENST00000621266 CCDC30Q5VVM6 783 aa11.51□□□□□ -0.57
COL4A6-210ENST00000621266 GSTTP1A0A1W2PQM5 241 aa11.5□□□□□ -0.57
COL4A6-210ENST00000621266 CPLX3Q8WVH0 158 aa11.5□□□□□ -0.57
COL4A6-210ENST00000621266 CNNM1Q9NRU3 951 aa11.5□□□□□ -0.57
COL4A6-210ENST00000621266 ADGRL1O94910 1474 aa11.5□□□□□ -0.57
COL4A6-210ENST00000621266 ADCY5O95622 1261 aa11.5□□□□□ -0.57
COL4A6-210ENST00000621266 DAAM2Q86T65 1068 aa11.5□□□□□ -0.57
COL4A6-210ENST00000621266 VGLL3A8MV65 326 aa11.5□□□□□ -0.57
COL4A6-210ENST00000621266 HLTFQ14527 1009 aaKnown RBP eCLIP11.5□□□□□ -0.57
COL4A6-210ENST00000621266 CCDC97Q96F63 343 aaPredicted RBP11.5□□□□□ -0.57
COL4A6-210ENST00000621266 SSBP05455 408 aaKnown RBP eCLIP11.5□□□□□ -0.57
COL4A6-210ENST00000621266 SPECC1LQ69YQ0 1117 aa11.5□□□□□ -0.57
COL4A6-210ENST00000621266 JAKMIP1Q96N16 626 aaKnown RBP11.5□□□□□ -0.57
COL4A6-210ENST00000621266 ZNF830Q96NB3 372 aaPredicted RBP11.5□□□□□ -0.57
COL4A6-210ENST00000621266 C10orf67Q8IYJ2 551 aa11.5□□□□□ -0.57
COL4A6-210ENST00000621266 NUP133Q8WUM0 1156 aa11.5□□□□□ -0.57
COL4A6-210ENST00000621266 SPINK5Q9NQ38 1064 aaPredicted RBP11.5□□□□□ -0.57
COL4A6-210ENST00000621266 MAGI1Q96QZ7 1491 aaPredicted RBP11.49□□□□□ -0.57
COL4A6-210ENST00000621266 SNW1Q13573 536 aaKnown RBP11.49□□□□□ -0.57
COL4A6-210ENST00000621266 USHBP1Q8N6Y0 703 aa11.49□□□□□ -0.57
COL4A6-210ENST00000621266 KLHL10Q6JEL2 608 aa11.49□□□□□ -0.57
COL4A6-210ENST00000621266 FERMT3Q86UX7 667 aa11.49□□□□□ -0.57
COL4A6-210ENST00000621266 CCDC141Q6ZP82 1450 aa11.49□□□□□ -0.57
COL4A6-210ENST00000621266 ZNF608Q9ULD9 1512 aaPredicted RBP11.49□□□□□ -0.57
COL4A6-210ENST00000621266 CCDC69A6NI79 296 aa11.49□□□□□ -0.57
COL4A6-210ENST00000621266 GNAI3P08754 354 aa11.49□□□□□ -0.57
COL4A6-210ENST00000621266 TBC1D2BQ9UPU7 963 aa11.49□□□□□ -0.57
COL4A6-210ENST00000621266 SSFA2P28290 1259 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms