RNA–Protein interactions for RNA: ENST00000619449.1

MALAT1-215, metastasis associated lung adenocarcinoma transcript 1, humanhuman

TSL 3 BASIC

Gene MALAT1, Length 794 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MALAT1-215ENST00000619449 MAPK8IP3Q9UPT6 1336 aa24.04■■□□□ 1.44
MALAT1-215ENST00000619449 SIPA1L3O60292 1781 aaPredicted RBP24.03■■□□□ 1.44
MALAT1-215ENST00000619449 NEFMP07197 916 aa24.03■■□□□ 1.44
MALAT1-215ENST00000619449 CABP4P57796 275 aa24.03■■□□□ 1.44
MALAT1-215ENST00000619449 ATG3Q9NT62 314 aa24.03■■□□□ 1.44
MALAT1-215ENST00000619449 TMPOP42166 694 aaKnown RBP24.02■■□□□ 1.44
MALAT1-215ENST00000619449 ASAP1Q9ULH1 1129 aa24.02■■□□□ 1.44
MALAT1-215ENST00000619449 CCER2I3L3R5 266 aa24.01■■□□□ 1.43
MALAT1-215ENST00000619449 LRRC4BQ9NT99 713 aa24.01■■□□□ 1.43
MALAT1-215ENST00000619449 PAPPAQ13219 1627 aa24.01■■□□□ 1.43
MALAT1-215ENST00000619449 PALLDQ8WX93 1383 aa24.01■■□□□ 1.43
MALAT1-215ENST00000619449 SMARCC1Q92922 1105 aaPredicted RBP24■■□□□ 1.43
MALAT1-215ENST00000619449 MCM10Q7L590 875 aa23.99■■□□□ 1.43
MALAT1-215ENST00000619449 DCTN1Q14203 1278 aa23.98■■□□□ 1.43
MALAT1-215ENST00000619449 SLC27A3Q5K4L6 730 aa23.98■■□□□ 1.43
MALAT1-215ENST00000619449 RIPK4P57078 832 aa23.97■■□□□ 1.43
MALAT1-215ENST00000619449 MIER1Q8N108 512 aa23.97■■□□□ 1.43
MALAT1-215ENST00000619449 ZNF831Q5JPB2 1677 aa23.96■■□□□ 1.43
MALAT1-215ENST00000619449 RTF1Q92541 710 aaKnown RBP23.96■■□□□ 1.43
MALAT1-215ENST00000619449 APAF1O14727 1248 aa23.95■■□□□ 1.42
MALAT1-215ENST00000619449 SLC4A9Q96Q91 983 aa23.95■■□□□ 1.42
MALAT1-215ENST00000619449 TRIM35Q9UPQ4 493 aa23.95■■□□□ 1.42
MALAT1-215ENST00000619449 RRP7AQ9Y3A4 280 aaKnown RBP23.95■■□□□ 1.42
MALAT1-215ENST00000619449 TEFQ10587 303 aa23.94■■□□□ 1.42
MALAT1-215ENST00000619449 UBR2Q8IWV8 1755 aa23.93■■□□□ 1.42
MALAT1-215ENST00000619449 LOC102724428A0A0B4J2F2 783 aa23.93■■□□□ 1.42
MALAT1-215ENST00000619449 KCNQ4P56696 695 aa23.93■■□□□ 1.42
MALAT1-215ENST00000619449 SIK1P57059 783 aa23.93■■□□□ 1.42
MALAT1-215ENST00000619449 ANO8Q9HCE9 1232 aaPredicted RBP23.93■■□□□ 1.42
MALAT1-215ENST00000619449 KCPQ6ZWJ8 1503 aa23.93■■□□□ 1.42
MALAT1-215ENST00000619449 CICQ96RK0 1608 aaPredicted RBP23.92■■□□□ 1.42
MALAT1-215ENST00000619449 TAF1LQ8IZX4 1826 aa23.92■■□□□ 1.42
MALAT1-215ENST00000619449 SLC39A6Q13433 755 aa23.92■■□□□ 1.42
MALAT1-215ENST00000619449 THUMPD2Q9BTF0 503 aaKnown RBP23.92■■□□□ 1.42
MALAT1-215ENST00000619449 CCNL1Q9UK58 526 aaPredicted RBP23.92■■□□□ 1.42
MALAT1-215ENST00000619449 FAM9BQ8IZU0 186 aa23.9■■□□□ 1.42
MALAT1-215ENST00000619449 C5P01031 1676 aa23.89■■□□□ 1.42
MALAT1-215ENST00000619449 LMOD3Q0VAK6 560 aa23.89■■□□□ 1.41
MALAT1-215ENST00000619449 ITPK1Q13572 414 aa23.89■■□□□ 1.41
MALAT1-215ENST00000619449 TAF7Q15545 349 aaPredicted RBP23.89■■□□□ 1.41
MALAT1-215ENST00000619449 NEUROD2Q15784 382 aa23.89■■□□□ 1.41
MALAT1-215ENST00000619449 NCBP3Q53F19 620 aaKnown RBP23.89■■□□□ 1.41
MALAT1-215ENST00000619449 ZNF790Q6PG37 636 aa23.89■■□□□ 1.41
MALAT1-215ENST00000619449 AKT1S1Q96B36 256 aa23.88■■□□□ 1.41
MALAT1-215ENST00000619449 BTBD11A6QL63 1104 aa23.87■■□□□ 1.41
MALAT1-215ENST00000619449 TJP1Q07157 1748 aa23.87■■□□□ 1.41
MALAT1-215ENST00000619449 KCNQ3O43525 872 aa23.86■■□□□ 1.41
MALAT1-215ENST00000619449 PTCD1O75127 700 aaKnown RBP23.86■■□□□ 1.41
MALAT1-215ENST00000619449 ZNF827Q17R98 1081 aa23.86■■□□□ 1.41
MALAT1-215ENST00000619449 COL5A3P25940 1745 aaPredicted RBP23.86■■□□□ 1.41
MALAT1-215ENST00000619449 KDM3BQ7LBC6 1761 aa23.86■■□□□ 1.41
MALAT1-215ENST00000619449 ATP6V1AP38606 617 aa23.85■■□□□ 1.41
MALAT1-215ENST00000619449 SLC15A2Q16348 729 aa23.85■■□□□ 1.41
MALAT1-215ENST00000619449 CCDC27Q2M243 656 aa23.85■■□□□ 1.41
MALAT1-215ENST00000619449 NBPF14Q5TI25 921 aa23.85■■□□□ 1.41
MALAT1-215ENST00000619449 LINC00116Q8NCU8 138 aa23.85■■□□□ 1.41
MALAT1-215ENST00000619449 RBM42Q9BTD8 480 aaKnown RBP23.85■■□□□ 1.41
MALAT1-215ENST00000619449 C4BP0C0L5 1744 aa23.84■■□□□ 1.41
MALAT1-215ENST00000619449 ZNF496Q96IT1 587 aaPredicted RBP23.84■■□□□ 1.41
MALAT1-215ENST00000619449 VSIG10Q8N0Z9 540 aa23.83■■□□□ 1.41
MALAT1-215ENST00000619449 R3HDM1Q15032 1099 aaKnown RBP23.82■■□□□ 1.4
MALAT1-215ENST00000619449 BABAM1Q9NWV8 329 aa23.82■■□□□ 1.4
MALAT1-215ENST00000619449 MIS18AQ9NYP9 233 aa23.82■■□□□ 1.4
MALAT1-215ENST00000619449 TUBGCP6Q96RT7 1819 aa23.82■■□□□ 1.4
MALAT1-215ENST00000619449 QSER1Q2KHR3 1735 aa23.81■■□□□ 1.4
MALAT1-215ENST00000619449 HEG1Q9ULI3 1381 aa23.81■■□□□ 1.4
MALAT1-215ENST00000619449 HMGB2P26583 209 aaKnown RBP23.81■■□□□ 1.4
MALAT1-215ENST00000619449 TTC5Q8N0Z6 440 aa23.81■■□□□ 1.4
MALAT1-215ENST00000619449 STK32BQ9NY57 414 aa23.81■■□□□ 1.4
MALAT1-215ENST00000619449 POTEDQ86YR6 584 aa23.8■■□□□ 1.4
MALAT1-215ENST00000619449 CHL1O00533 1208 aa23.79■■□□□ 1.4
MALAT1-215ENST00000619449 ZNF853P0CG23 659 aa23.79■■□□□ 1.4
MALAT1-215ENST00000619449 WWC1Q8IX03 1113 aa23.79■■□□□ 1.4
MALAT1-215ENST00000619449 FMNL2Q96PY5 1086 aa23.79■■□□□ 1.4
MALAT1-215ENST00000619449 MYH14Q7Z406 1995 aaKnown RBP23.79■■□□□ 1.4
MALAT1-215ENST00000619449 CASZ1Q86V15 1759 aa23.78■■□□□ 1.4
MALAT1-215ENST00000619449 SENP3-EIF4A1A0A087X0R7 540 aa23.78■■□□□ 1.4
MALAT1-215ENST00000619449 PSDA5PKW4 1024 aaPredicted RBP23.78■■□□□ 1.4
MALAT1-215ENST00000619449 RC3H1Q5TC82 1133 aaKnown RBP23.78■■□□□ 1.4
MALAT1-215ENST00000619449 AMIGO3Q86WK7 504 aa23.78■■□□□ 1.4
MALAT1-215ENST00000619449 DNAJC10Q8IXB1 793 aa23.78■■□□□ 1.4
MALAT1-215ENST00000619449 CNTNAP4Q9C0A0 1308 aa23.78■■□□□ 1.4
MALAT1-215ENST00000619449 UBR3Q6ZT12 1888 aa23.77■■□□□ 1.4
MALAT1-215ENST00000619449 EIF4A1P60842 406 aaKnown RBP23.77■■□□□ 1.4
MALAT1-215ENST00000619449 CYP19A1P11511 503 aaPredicted RBP23.76■■□□□ 1.39
MALAT1-215ENST00000619449 NGEFQ8N5V2 710 aa23.76■■□□□ 1.39
MALAT1-215ENST00000619449 CFAP44Q96MT7 982 aa23.76■■□□□ 1.39
MALAT1-215ENST00000619449 PNPLA7Q6ZV29 1317 aa23.76■■□□□ 1.39
MALAT1-215ENST00000619449 PDGFDQ9GZP0 370 aaPredicted RBP23.75■■□□□ 1.39
MALAT1-215ENST00000619449 TSPYL4Q9UJ04 414 aa23.75■■□□□ 1.39
MALAT1-215ENST00000619449 INTS5Q6P9B9 1019 aaKnown RBP23.74■■□□□ 1.39
MALAT1-215ENST00000619449 PRAMEF22A3QJZ6 481 aa23.73■■□□□ 1.39
MALAT1-215ENST00000619449 CRKLP46109 303 aaKnown RBP23.73■■□□□ 1.39
MALAT1-215ENST00000619449 IFT57Q9NWB7 429 aa23.73■■□□□ 1.39
MALAT1-215ENST00000619449 TFCP2L1Q9NZI6 479 aa23.73■■□□□ 1.39
MALAT1-215ENST00000619449 ZNF521Q96K83 1311 aa23.73■■□□□ 1.39
MALAT1-215ENST00000619449 CALD1Q05682 793 aaKnown RBP23.72■■□□□ 1.39
MALAT1-215ENST00000619449 AK7Q96M32 723 aa23.72■■□□□ 1.39
MALAT1-215ENST00000619449 TEX13AQ9BXU3 409 aaPredicted RBP23.72■■□□□ 1.39
MALAT1-215ENST00000619449 IL16Q14005 1332 aa23.71■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms