RNA–Protein interactions for RNA: ENST00000618516.4

SYCP1-210, Transcript of synaptonemal complex protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYCP1, Length 3,109 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP1-210ENST00000618516 RSPH6AQ9H0K4 717 aa6.06□□□□□ -1.44
SYCP1-210ENST00000618516 BLMP54132 1417 aaPredicted RBP6.06□□□□□ -1.44
SYCP1-210ENST00000618516 BTBD11A6QL63 1104 aa6.06□□□□□ -1.44
SYCP1-210ENST00000618516 GNAT3A8MTJ3 354 aa6.06□□□□□ -1.44
SYCP1-210ENST00000618516 IL17REQ8NFR9 667 aa6.06□□□□□ -1.44
SYCP1-210ENST00000618516 ONECUT3O60422 494 aaPredicted RBP6.05□□□□□ -1.44
SYCP1-210ENST00000618516 DSG3P32926 999 aa6.05□□□□□ -1.44
SYCP1-210ENST00000618516 AMIGO3Q86WK7 504 aa6.05□□□□□ -1.44
SYCP1-210ENST00000618516 DNAJC10Q8IXB1 793 aa6.05□□□□□ -1.44
SYCP1-210ENST00000618516 AK7Q96M32 723 aa6.05□□□□□ -1.44
SYCP1-210ENST00000618516 BCL2L13Q9BXK5 485 aa6.05□□□□□ -1.44
SYCP1-210ENST00000618516 BRD4O60885 1362 aaPredicted RBP6.05□□□□□ -1.44
SYCP1-210ENST00000618516 NSD2O96028 1365 aa6.05□□□□□ -1.44
SYCP1-210ENST00000618516 PEAK1Q9H792 1746 aa6.05□□□□□ -1.44
SYCP1-210ENST00000618516 SLIT3O75094 1523 aa6.05□□□□□ -1.44
SYCP1-210ENST00000618516 LOC102724428A0A0B4J2F2 783 aa6.05□□□□□ -1.44
SYCP1-210ENST00000618516 SIK1P57059 783 aa6.05□□□□□ -1.44
SYCP1-210ENST00000618516 CDCA7Q9BWT1 371 aaPredicted RBP6.05□□□□□ -1.44
SYCP1-210ENST00000618516 TSPYL4Q9UJ04 414 aa6.05□□□□□ -1.44
SYCP1-210ENST00000618516 TBC1D2BQ9UPU7 963 aa6.05□□□□□ -1.44
SYCP1-210ENST00000618516 COL14A1Q05707 1796 aaKnown RBP6.05□□□□□ -1.44
SYCP1-210ENST00000618516 A1BGP04217 495 aa6.05□□□□□ -1.44
SYCP1-210ENST00000618516 ZNF827Q17R98 1081 aa6.05□□□□□ -1.44
SYCP1-210ENST00000618516 NBPF14Q5TI25 921 aa6.05□□□□□ -1.44
SYCP1-210ENST00000618516 ZNF496Q96IT1 587 aaPredicted RBP6.05□□□□□ -1.44
SYCP1-210ENST00000618516 ABCA3Q99758 1704 aa6.04□□□□□ -1.44
SYCP1-210ENST00000618516 RNMTO43148 476 aaKnown RBP6.04□□□□□ -1.44
SYCP1-210ENST00000618516 AMOTQ4VCS5 1084 aa6.04□□□□□ -1.44
SYCP1-210ENST00000618516 DCAF5Q96JK2 942 aa6.04□□□□□ -1.44
SYCP1-210ENST00000618516 ZNF219Q9P2Y4 722 aaPredicted RBP6.04□□□□□ -1.44
SYCP1-210ENST00000618516 PALLDQ8WX93 1383 aa6.04□□□□□ -1.44
SYCP1-210ENST00000618516 GAS2L2Q8NHY3 880 aa6.04□□□□□ -1.44
SYCP1-210ENST00000618516 ATG3Q9NT62 314 aa6.04□□□□□ -1.44
SYCP1-210ENST00000618516 STK32BQ9NY57 414 aa6.04□□□□□ -1.44
SYCP1-210ENST00000618516 PARD3Q8TEW0 1356 aa6.04□□□□□ -1.44
SYCP1-210ENST00000618516 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.03□□□□□ -1.44
SYCP1-210ENST00000618516 RTL1A6NKG5 1358 aa6.03□□□□□ -1.44
SYCP1-210ENST00000618516 TMPOP42166 694 aaKnown RBP6.03□□□□□ -1.44
SYCP1-210ENST00000618516 ITPK1Q13572 414 aa6.03□□□□□ -1.44
SYCP1-210ENST00000618516 AKAP4Q5JQC9 854 aa6.03□□□□□ -1.44
SYCP1-210ENST00000618516 BRWD3Q6RI45 1802 aa6.03□□□□□ -1.44
SYCP1-210ENST00000618516 COL22A1Q8NFW1 1626 aaPredicted RBP6.03□□□□□ -1.44
SYCP1-210ENST00000618516 SRP68Q9UHB9 627 aaKnown RBP6.03□□□□□ -1.44
SYCP1-210ENST00000618516 KIF20BQ96Q89 1820 aa6.03□□□□□ -1.44
SYCP1-210ENST00000618516 MARF1Q9Y4F3 1742 aaKnown RBP6.03□□□□□ -1.44
SYCP1-210ENST00000618516 FCHSD2O94868 740 aa6.03□□□□□ -1.44
SYCP1-210ENST00000618516 CAMKK2Q96RR4 588 aa6.03□□□□□ -1.44
SYCP1-210ENST00000618516 USP16Q9Y5T5 823 aa6.03□□□□□ -1.44
SYCP1-210ENST00000618516 JARID2Q92833 1246 aaPredicted RBP6.03□□□□□ -1.44
SYCP1-210ENST00000618516 CDCA7LQ96GN5 454 aa6.03□□□□□ -1.44
SYCP1-210ENST00000618516 SLC4A9Q96Q91 983 aa6.03□□□□□ -1.44
SYCP1-210ENST00000618516 SLC52A2Q9HAB3 445 aa6.03□□□□□ -1.44
SYCP1-210ENST00000618516 TNS2Q63HR2 1409 aa6.02□□□□□ -1.45
SYCP1-210ENST00000618516 LINC00116Q8NCU8 138 aa6.02□□□□□ -1.45
SYCP1-210ENST00000618516 GPTP24298 496 aa6.02□□□□□ -1.45
SYCP1-210ENST00000618516 NFE2L2Q16236 605 aa6.02□□□□□ -1.45
SYCP1-210ENST00000618516 ZBTB3Q9H5J0 574 aa6.02□□□□□ -1.45
SYCP1-210ENST00000618516 ZBTB1Q9Y2K1 713 aa6.02□□□□□ -1.45
SYCP1-210ENST00000618516 ZNF790Q6PG37 636 aa6.01□□□□□ -1.45
SYCP1-210ENST00000618516 PNISRQ8TF01 805 aaKnown RBP6.01□□□□□ -1.45
SYCP1-210ENST00000618516 RUNDC1Q96C34 613 aa6.01□□□□□ -1.45
SYCP1-210ENST00000618516 HSP90AB1P08238 724 aaKnown RBP6.01□□□□□ -1.45
SYCP1-210ENST00000618516 RFC4P35249 363 aa6.01□□□□□ -1.45
SYCP1-210ENST00000618516 CCDC85AQ96PX6 553 aaPredicted RBP6.01□□□□□ -1.45
SYCP1-210ENST00000618516 MAP3K5Q99683 1374 aa6.01□□□□□ -1.45
SYCP1-210ENST00000618516 LMO7Q8WWI1 1683 aa6.01□□□□□ -1.45
SYCP1-210ENST00000618516 CRKLP46109 303 aaKnown RBP6.01□□□□□ -1.45
SYCP1-210ENST00000618516 SLC15A2Q16348 729 aa6.01□□□□□ -1.45
SYCP1-210ENST00000618516 GTF2E1P29083 439 aaPredicted RBP6□□□□□ -1.45
SYCP1-210ENST00000618516 COL23A1Q86Y22 540 aaPredicted RBP6□□□□□ -1.45
SYCP1-210ENST00000618516 SPINK5Q9NQ38 1064 aaPredicted RBP6□□□□□ -1.45
SYCP1-210ENST00000618516 RTCBQ9Y3I0 505 aaKnown RBP6□□□□□ -1.45
SYCP1-210ENST00000618516 KDM6AO15550 1401 aaPredicted RBP6□□□□□ -1.45
SYCP1-210ENST00000618516 DISP2A7MBM2 1401 aa6□□□□□ -1.45
SYCP1-210ENST00000618516 TSPYL6Q8N831 410 aa6□□□□□ -1.45
SYCP1-210ENST00000618516 TAF7Q15545 349 aaPredicted RBP5.99□□□□□ -1.45
SYCP1-210ENST00000618516 PLEKHF1Q96S99 279 aa5.99□□□□□ -1.45
SYCP1-210ENST00000618516 COL18A1P39060 1754 aa5.99□□□□□ -1.45
SYCP1-210ENST00000618516 NRAPQ86VF7 1730 aa5.99□□□□□ -1.45
SYCP1-210ENST00000618516 PROSER3Q2NL68 480 aa5.99□□□□□ -1.45
SYCP1-210ENST00000618516 USPL1Q5W0Q7 1092 aa5.99□□□□□ -1.45
SYCP1-210ENST00000618516 CRYBG1Q9Y4K1 1723 aa5.99□□□□□ -1.45
SYCP1-210ENST00000618516 ATP5J2-PTCD1G3V325 749 aa5.99□□□□□ -1.45
SYCP1-210ENST00000618516 ZPR1O75312 459 aa5.99□□□□□ -1.45
SYCP1-210ENST00000618516 TRAPPC3LQ5T215 181 aa5.99□□□□□ -1.45
SYCP1-210ENST00000618516 ZNF526Q8TF50 670 aaPredicted RBP5.99□□□□□ -1.45
SYCP1-210ENST00000618516 FMNL2Q96PY5 1086 aa5.99□□□□□ -1.45
SYCP1-210ENST00000618516 MBIPQ9NS73 344 aa5.99□□□□□ -1.45
SYCP1-210ENST00000618516 TRIM35Q9UPQ4 493 aa5.99□□□□□ -1.45
SYCP1-210ENST00000618516 ERVV-2B6SEH9 535 aa5.98□□□□□ -1.45
SYCP1-210ENST00000618516 MMP10P09238 476 aa5.98□□□□□ -1.45
SYCP1-210ENST00000618516 HDGFL1Q5TGJ6 251 aa5.98□□□□□ -1.45
SYCP1-210ENST00000618516 SLC4A10Q6U841 1118 aa5.98□□□□□ -1.45
SYCP1-210ENST00000618516 CCDC125Q86Z20 511 aa5.98□□□□□ -1.45
SYCP1-210ENST00000618516 FRAT1Q92837 279 aaPredicted RBP5.98□□□□□ -1.45
SYCP1-210ENST00000618516 ARHGEF1Q92888 912 aaKnown RBP5.98□□□□□ -1.45
SYCP1-210ENST00000618516 SMARCC1Q92922 1105 aaPredicted RBP5.98□□□□□ -1.45
SYCP1-210ENST00000618516 STARD3NLO95772 234 aa5.98□□□□□ -1.45
SYCP1-210ENST00000618516 FKBP8Q14318 412 aa5.98□□□□□ -1.45
SYCP1-210ENST00000618516 C8orf58Q8NAV2 365 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms