RNA–Protein interactions for RNA: ENST00000617767.4

CPNE4-214, Transcript of copine 4, humanhuman

TSL 2 BASIC

Gene CPNE4, Length 3,556 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-214ENST00000617767 DIP2AQ14689 1571 aa6.84□□□□□ -1.31
CPNE4-214ENST00000617767 TECPR2O15040 1411 aa6.84□□□□□ -1.31
CPNE4-214ENST00000617767 TRIM6-TRIM34B2RNG4 842 aa6.84□□□□□ -1.31
CPNE4-214ENST00000617767 PTMSP20962 102 aa6.84□□□□□ -1.31
CPNE4-214ENST00000617767 C8orf34Q49A92 452 aa6.84□□□□□ -1.31
CPNE4-214ENST00000617767 TRIM34Q9BYJ4 488 aa6.84□□□□□ -1.31
CPNE4-214ENST00000617767 TSPYL4Q9UJ04 414 aa6.84□□□□□ -1.31
CPNE4-214ENST00000617767 CEP170BQ9Y4F5 1589 aaPredicted RBP6.84□□□□□ -1.31
CPNE4-214ENST00000617767 AXDND1Q5T1B0 1012 aaPredicted RBP6.84□□□□□ -1.31
CPNE4-214ENST00000617767 SLKQ9H2G2 1235 aaPredicted RBP6.84□□□□□ -1.31
CPNE4-214ENST00000617767 MON2Q7Z3U7 1717 aa6.84□□□□□ -1.32
CPNE4-214ENST00000617767 LOC102724159A0A0B4J2E5 919 aa6.83□□□□□ -1.32
CPNE4-214ENST00000617767 EIF2S2P20042 333 aaKnown RBP6.83□□□□□ -1.32
CPNE4-214ENST00000617767 PWP2Q15269 919 aaKnown RBP6.83□□□□□ -1.32
CPNE4-214ENST00000617767 FAM161AQ3B820 660 aa6.83□□□□□ -1.32
CPNE4-214ENST00000617767 PLCD4Q9BRC7 762 aa6.83□□□□□ -1.32
CPNE4-214ENST00000617767 GRPEL1Q9HAV7 217 aa6.83□□□□□ -1.32
CPNE4-214ENST00000617767 ADGRB2O60241 1585 aa6.83□□□□□ -1.32
CPNE4-214ENST00000617767 AKAP12Q02952 1782 aa6.83□□□□□ -1.32
CPNE4-214ENST00000617767 SLC4A2P04920 1241 aa6.83□□□□□ -1.32
CPNE4-214ENST00000617767 HOXC9P31274 260 aa6.83□□□□□ -1.32
CPNE4-214ENST00000617767 ZNF771Q7L3S4 317 aaPredicted RBP6.83□□□□□ -1.32
CPNE4-214ENST00000617767 SIRT1Q96EB6 747 aa6.83□□□□□ -1.32
CPNE4-214ENST00000617767 RWDD1Q9H446 243 aaPredicted RBP6.83□□□□□ -1.32
CPNE4-214ENST00000617767 MED14O60244 1454 aa6.83□□□□□ -1.32
CPNE4-214ENST00000617767 DYNC1I1O14576 645 aa6.83□□□□□ -1.32
CPNE4-214ENST00000617767 ANXA1P04083 346 aa6.83□□□□□ -1.32
CPNE4-214ENST00000617767 PEAK1Q9H792 1746 aa6.82□□□□□ -1.32
CPNE4-214ENST00000617767 IPO8O15397 1037 aaKnown RBP6.82□□□□□ -1.32
CPNE4-214ENST00000617767 ANKRD45Q5TZF3 282 aa6.82□□□□□ -1.32
CPNE4-214ENST00000617767 G2E3Q7L622 706 aa6.82□□□□□ -1.32
CPNE4-214ENST00000617767 MPNDQ8N594 471 aa6.82□□□□□ -1.32
CPNE4-214ENST00000617767 IFT57Q9NWB7 429 aa6.82□□□□□ -1.32
CPNE4-214ENST00000617767 CDK12Q9NYV4 1490 aaPredicted RBP6.82□□□□□ -1.32
CPNE4-214ENST00000617767 SLC20A2Q08357 652 aa6.82□□□□□ -1.32
CPNE4-214ENST00000617767 CHRNA2Q15822 529 aa6.82□□□□□ -1.32
CPNE4-214ENST00000617767 MPRIPQ6WCQ1 1025 aa6.82□□□□□ -1.32
CPNE4-214ENST00000617767 MRPL50Q8N5N7 158 aaKnown RBP6.82□□□□□ -1.32
CPNE4-214ENST00000617767 DDX19BQ9UMR2 479 aa6.82□□□□□ -1.32
CPNE4-214ENST00000617767 KNDC1Q76NI1 1749 aa6.82□□□□□ -1.32
CPNE4-214ENST00000617767 OVOS2A0A0J9YW53 1432 aa6.82□□□□□ -1.32
CPNE4-214ENST00000617767 OVOS2Q6IE36 1432 aa6.82□□□□□ -1.32
CPNE4-214ENST00000617767 NBPF6Q5VWK0 638 aa6.82□□□□□ -1.32
CPNE4-214ENST00000617767 NBPF4Q96M43 638 aa6.82□□□□□ -1.32
CPNE4-214ENST00000617767 AATKQ6ZMQ8 1374 aa6.81□□□□□ -1.32
CPNE4-214ENST00000617767 MSNP26038 577 aaKnown RBP6.81□□□□□ -1.32
CPNE4-214ENST00000617767 MFAP1P55081 439 aaKnown RBP6.81□□□□□ -1.32
CPNE4-214ENST00000617767 ATP2B3Q16720 1220 aa6.81□□□□□ -1.32
CPNE4-214ENST00000617767 SLIT1O75093 1534 aa6.81□□□□□ -1.32
CPNE4-214ENST00000617767 FLT4P35916 1363 aa6.81□□□□□ -1.32
CPNE4-214ENST00000617767 KIF16BQ96L93 1317 aa6.81□□□□□ -1.32
CPNE4-214ENST00000617767 LMOD3Q0VAK6 560 aa6.81□□□□□ -1.32
CPNE4-214ENST00000617767 CARD10Q9BWT7 1032 aa6.81□□□□□ -1.32
CPNE4-214ENST00000617767 DNAJC5Q9H3Z4 198 aa6.81□□□□□ -1.32
CPNE4-214ENST00000617767 LGR6Q9HBX8 967 aa6.81□□□□□ -1.32
CPNE4-214ENST00000617767 ARHGAP23Q9P227 1491 aa6.81□□□□□ -1.32
CPNE4-214ENST00000617767 ZSCAN30Q86W11 494 aa6.8□□□□□ -1.32
CPNE4-214ENST00000617767 SPDYE4A6NLX3 237 aa6.8□□□□□ -1.32
CPNE4-214ENST00000617767 KCNQ3O43525 872 aa6.8□□□□□ -1.32
CPNE4-214ENST00000617767 OS9Q13438 667 aaPredicted RBP6.8□□□□□ -1.32
CPNE4-214ENST00000617767 BANK1Q8NDB2 785 aa6.8□□□□□ -1.32
CPNE4-214ENST00000617767 GEMIN8Q9NWZ8 242 aaKnown RBP6.8□□□□□ -1.32
CPNE4-214ENST00000617767 IL16Q14005 1332 aa6.8□□□□□ -1.32
CPNE4-214ENST00000617767 TTC21AQ8NDW8 1320 aa6.8□□□□□ -1.32
CPNE4-214ENST00000617767 SMARCA5O60264 1052 aaPredicted RBP6.8□□□□□ -1.32
CPNE4-214ENST00000617767 ZBTB40Q9NUA8 1239 aa6.8□□□□□ -1.32
CPNE4-214ENST00000617767 AXIN2Q9Y2T1 843 aa6.8□□□□□ -1.32
CPNE4-214ENST00000617767 PHF14O94880 888 aa6.79□□□□□ -1.32
CPNE4-214ENST00000617767 CSB-PGBD3P0DP91 1061 aa6.79□□□□□ -1.32
CPNE4-214ENST00000617767 ATF3P18847 181 aa6.79□□□□□ -1.32
CPNE4-214ENST00000617767 KRT28Q7Z3Y7 464 aa6.79□□□□□ -1.32
CPNE4-214ENST00000617767 EGFL6Q8IUX8 553 aa6.79□□□□□ -1.32
CPNE4-214ENST00000617767 PIK3C2AO00443 1686 aa6.79□□□□□ -1.32
CPNE4-214ENST00000617767 GCP02774 474 aa6.79□□□□□ -1.32
CPNE4-214ENST00000617767 ZNF853P0CG23 659 aa6.79□□□□□ -1.32
CPNE4-214ENST00000617767 FKBP5Q13451 457 aaPredicted RBP6.79□□□□□ -1.32
CPNE4-214ENST00000617767 C16orf71Q8IYS4 520 aaPredicted RBP6.79□□□□□ -1.32
CPNE4-214ENST00000617767 IL17REQ8NFR9 667 aa6.79□□□□□ -1.32
CPNE4-214ENST00000617767 JARID2Q92833 1246 aaPredicted RBP6.79□□□□□ -1.32
CPNE4-214ENST00000617767 NLRP2Q9NX02 1062 aa6.79□□□□□ -1.32
CPNE4-214ENST00000617767 SBNO1A3KN83 1393 aa6.79□□□□□ -1.32
CPNE4-214ENST00000617767 NALCNQ8IZF0 1738 aa6.79□□□□□ -1.32
CPNE4-214ENST00000617767 NPHP4O75161 1426 aaPredicted RBP6.79□□□□□ -1.32
CPNE4-214ENST00000617767 PTCH1Q13635 1447 aa6.79□□□□□ -1.32
CPNE4-214ENST00000617767 GNAT3A8MTJ3 354 aa6.79□□□□□ -1.32
CPNE4-214ENST00000617767 PIP4K2AP48426 406 aaPredicted RBP6.79□□□□□ -1.32
CPNE4-214ENST00000617767 MEIS3Q99687 375 aa6.79□□□□□ -1.32
CPNE4-214ENST00000617767 IRF6O14896 467 aa6.78□□□□□ -1.32
CPNE4-214ENST00000617767 CAPN2P17655 700 aa6.78□□□□□ -1.32
CPNE4-214ENST00000617767 TSHZ3Q63HK5 1081 aa6.78□□□□□ -1.32
CPNE4-214ENST00000617767 ZBTB7BO15156 539 aaPredicted RBP6.78□□□□□ -1.32
CPNE4-214ENST00000617767 MCCP23508 829 aa6.78□□□□□ -1.32
CPNE4-214ENST00000617767 ALDH1L2Q3SY69 923 aa6.78□□□□□ -1.32
CPNE4-214ENST00000617767 ZNF530Q6P9A1 599 aaPredicted RBP6.78□□□□□ -1.32
CPNE4-214ENST00000617767 TSC1Q92574 1164 aa6.78□□□□□ -1.32
CPNE4-214ENST00000617767 PRAMEF22A3QJZ6 481 aa6.78□□□□□ -1.32
CPNE4-214ENST00000617767 CHL1O00533 1208 aa6.78□□□□□ -1.32
CPNE4-214ENST00000617767 SIRT2Q8IXJ6 389 aa6.78□□□□□ -1.32
CPNE4-214ENST00000617767 PHAXQ9H814 394 aaKnown RBP6.78□□□□□ -1.32
CPNE4-214ENST00000617767 YY1AP1Q9H869 796 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms