RNA–Protein interactions for RNA: ENST00000617626.1

U1.41-201, humanhuman

BASIC

Gene U1, Length 165 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U1.41-201ENST00000617626 SBF2Q86WG5 1849 aa8.6□□□□□ -1.03
U1.41-201ENST00000617626 ERVV-2B6SEH9 535 aa8.6□□□□□ -1.03
U1.41-201ENST00000617626 CABP4P57796 275 aa8.6□□□□□ -1.03
U1.41-201ENST00000617626 CALD1Q05682 793 aaKnown RBP8.6□□□□□ -1.03
U1.41-201ENST00000617626 TMOD3Q9NYL9 352 aa8.6□□□□□ -1.03
U1.41-201ENST00000617626 NUP188Q5SRE5 1749 aa8.6□□□□□ -1.03
U1.41-201ENST00000617626 NHSQ6T4R5 1651 aa8.59□□□□□ -1.03
U1.41-201ENST00000617626 RNMTO43148 476 aaKnown RBP8.59□□□□□ -1.03
U1.41-201ENST00000617626 NCBP3Q53F19 620 aaKnown RBP8.59□□□□□ -1.03
U1.41-201ENST00000617626 ACSBG1Q96GR2 724 aa8.59□□□□□ -1.03
U1.41-201ENST00000617626 RRP7AQ9Y3A4 280 aaKnown RBP8.59□□□□□ -1.03
U1.41-201ENST00000617626 ITGB4P16144 1822 aa8.59□□□□□ -1.03
U1.41-201ENST00000617626 TRIM37O94972 964 aa8.58□□□□□ -1.04
U1.41-201ENST00000617626 PRIM1P49642 420 aaKnown RBP8.58□□□□□ -1.04
U1.41-201ENST00000617626 BCL11BQ9C0K0 894 aaPredicted RBP8.58□□□□□ -1.04
U1.41-201ENST00000617626 TOGARAM1Q9Y4F4 1720 aa8.57□□□□□ -1.04
U1.41-201ENST00000617626 KDM6AO15550 1401 aaPredicted RBP8.57□□□□□ -1.04
U1.41-201ENST00000617626 RREB1Q92766 1687 aa8.57□□□□□ -1.04
U1.41-201ENST00000617626 ADAMTS7Q9UKP4 1686 aa8.57□□□□□ -1.04
U1.41-201ENST00000617626 HMGB2P26583 209 aaKnown RBP8.57□□□□□ -1.04
U1.41-201ENST00000617626 CCDC27Q2M243 656 aa8.57□□□□□ -1.04
U1.41-201ENST00000617626 MCM10Q7L590 875 aa8.57□□□□□ -1.04
U1.41-201ENST00000617626 SMARCC1Q92922 1105 aaPredicted RBP8.57□□□□□ -1.04
U1.41-201ENST00000617626 CAMKK2Q96RR4 588 aa8.57□□□□□ -1.04
U1.41-201ENST00000617626 PDGFDQ9GZP0 370 aaPredicted RBP8.57□□□□□ -1.04
U1.41-201ENST00000617626 SLC52A2Q9HAB3 445 aa8.57□□□□□ -1.04
U1.41-201ENST00000617626 LGR6Q9HBX8 967 aa8.57□□□□□ -1.04
U1.41-201ENST00000617626 SALL2Q9Y467 1007 aaPredicted RBP8.57□□□□□ -1.04
U1.41-201ENST00000617626 BTAF1O14981 1849 aa8.57□□□□□ -1.04
U1.41-201ENST00000617626 BTBD11A6QL63 1104 aa8.56□□□□□ -1.04
U1.41-201ENST00000617626 BAG6P46379 1132 aa8.56□□□□□ -1.04
U1.41-201ENST00000617626 HNRNPUQ00839 825 aaKnown RBP eCLIP8.56□□□□□ -1.04
U1.41-201ENST00000617626 DCTN1Q14203 1278 aa8.56□□□□□ -1.04
U1.41-201ENST00000617626 TAF7Q15545 349 aaPredicted RBP8.56□□□□□ -1.04
U1.41-201ENST00000617626 TTC5Q8N0Z6 440 aa8.56□□□□□ -1.04
U1.41-201ENST00000617626 NFATC2IPQ8NCF5 419 aa8.56□□□□□ -1.04
U1.41-201ENST00000617626 IL17REQ8NFR9 667 aa8.56□□□□□ -1.04
U1.41-201ENST00000617626 CEMIPQ8WUJ3 1361 aa8.56□□□□□ -1.04
U1.41-201ENST00000617626 SIPA1L3O60292 1781 aaPredicted RBP8.56□□□□□ -1.04
U1.41-201ENST00000617626 KCNQ2O43526 872 aa8.55□□□□□ -1.04
U1.41-201ENST00000617626 APBA3O96018 575 aa8.55□□□□□ -1.04
U1.41-201ENST00000617626 YY1P25490 414 aa8.55□□□□□ -1.04
U1.41-201ENST00000617626 GNAI1P63096 354 aa8.55□□□□□ -1.04
U1.41-201ENST00000617626 PTF1AQ7RTS3 328 aa8.55□□□□□ -1.04
U1.41-201ENST00000617626 WDR63Q8IWG1 891 aa8.55□□□□□ -1.04
U1.41-201ENST00000617626 BABAM1Q9NWV8 329 aa8.55□□□□□ -1.04
U1.41-201ENST00000617626 TRIM35Q9UPQ4 493 aa8.55□□□□□ -1.04
U1.41-201ENST00000617626 LAS1LQ9Y4W2 734 aaKnown RBP8.55□□□□□ -1.04
U1.41-201ENST00000617626 MRC1P22897 1456 aa8.55□□□□□ -1.04
U1.41-201ENST00000617626 UTRNP46939 3433 aa8.55□□□□□ -1.04
U1.41-201ENST00000617626 SENP3-EIF4A1A0A087X0R7 540 aa8.54□□□□□ -1.04
U1.41-201ENST00000617626 FKBP8Q14318 412 aa8.54□□□□□ -1.04
U1.41-201ENST00000617626 WWC1Q8IX03 1113 aa8.54□□□□□ -1.04
U1.41-201ENST00000617626 PIGBQ92521 554 aa8.54□□□□□ -1.04
U1.41-201ENST00000617626 TSPYL4Q9UJ04 414 aa8.54□□□□□ -1.04
U1.41-201ENST00000617626 RGPD3A6NKT7 1758 aaPredicted RBP8.53□□□□□ -1.04
U1.41-201ENST00000617626 RGPD4Q7Z3J3 1758 aa8.53□□□□□ -1.04
U1.41-201ENST00000617626 PLSCR1O15162 318 aa8.53□□□□□ -1.04
U1.41-201ENST00000617626 CFAP44Q96MT7 982 aa8.53□□□□□ -1.04
U1.41-201ENST00000617626 RBM42Q9BTD8 480 aaKnown RBP8.53□□□□□ -1.04
U1.41-201ENST00000617626 THUMPD2Q9BTF0 503 aaKnown RBP8.53□□□□□ -1.04
U1.41-201ENST00000617626 IFT57Q9NWB7 429 aa8.53□□□□□ -1.04
U1.41-201ENST00000617626 IL16Q14005 1332 aa8.53□□□□□ -1.04
U1.41-201ENST00000617626 PALLDQ8WX93 1383 aa8.52□□□□□ -1.05
U1.41-201ENST00000617626 PAPPAQ13219 1627 aa8.52□□□□□ -1.05
U1.41-201ENST00000617626 GOLGA2Q08379 1002 aa8.52□□□□□ -1.05
U1.41-201ENST00000617626 ZNF790Q6PG37 636 aa8.52□□□□□ -1.05
U1.41-201ENST00000617626 FMNL2Q96PY5 1086 aa8.52□□□□□ -1.05
U1.41-201ENST00000617626 MYH16Q9H6N6 1097 aa8.52□□□□□ -1.05
U1.41-201ENST00000617626 ANO8Q9HCE9 1232 aaPredicted RBP8.52□□□□□ -1.05
U1.41-201ENST00000617626 KDM3BQ7LBC6 1761 aa8.52□□□□□ -1.05
U1.41-201ENST00000617626 LY75O60449 1722 aa8.51□□□□□ -1.05
U1.41-201ENST00000617626 CASZ1Q86V15 1759 aa8.51□□□□□ -1.05
U1.41-201ENST00000617626 PTCD1O75127 700 aaKnown RBP8.51□□□□□ -1.05
U1.41-201ENST00000617626 SLC39A6Q13433 755 aa8.51□□□□□ -1.05
U1.41-201ENST00000617626 SLC27A3Q5K4L6 730 aa8.51□□□□□ -1.05
U1.41-201ENST00000617626 CHMP4AQ9BY43 222 aa8.51□□□□□ -1.05
U1.41-201ENST00000617626 ATG3Q9NT62 314 aa8.51□□□□□ -1.05
U1.41-201ENST00000617626 CCNL1Q9UK58 526 aaPredicted RBP8.51□□□□□ -1.05
U1.41-201ENST00000617626 ASAP1Q9ULH1 1129 aa8.51□□□□□ -1.05
U1.41-201ENST00000617626 ZBED9Q6R2W3 1325 aa8.51□□□□□ -1.05
U1.41-201ENST00000617626 UBR2Q8IWV8 1755 aa8.5□□□□□ -1.05
U1.41-201ENST00000617626 E9PSI1 815 aa8.5□□□□□ -1.05
U1.41-201ENST00000617626 CHL1O00533 1208 aa8.5□□□□□ -1.05
U1.41-201ENST00000617626 ATP6V1AP38606 617 aa8.5□□□□□ -1.05
U1.41-201ENST00000617626 VSIG10Q8N0Z9 540 aa8.5□□□□□ -1.05
U1.41-201ENST00000617626 PKNOX2Q96KN3 472 aa8.5□□□□□ -1.05
U1.41-201ENST00000617626 TEX13AQ9BXU3 409 aaPredicted RBP8.5□□□□□ -1.05
U1.41-201ENST00000617626 MIS18AQ9NYP9 233 aa8.5□□□□□ -1.05
U1.41-201ENST00000617626 ZNF831Q5JPB2 1677 aa8.49□□□□□ -1.05
U1.41-201ENST00000617626 LOC102724428A0A0B4J2F2 783 aa8.49□□□□□ -1.05
U1.41-201ENST00000617626 SNRPA1P09661 255 aaKnown RBP8.49□□□□□ -1.05
U1.41-201ENST00000617626 SIK1P57059 783 aa8.49□□□□□ -1.05
U1.41-201ENST00000617626 TXNRD1Q16881 649 aa8.49□□□□□ -1.05
U1.41-201ENST00000617626 MBIPQ9NS73 344 aa8.49□□□□□ -1.05
U1.41-201ENST00000617626 HEG1Q9ULI3 1381 aa8.48□□□□□ -1.05
U1.41-201ENST00000617626 STARD3NLO95772 234 aa8.48□□□□□ -1.05
U1.41-201ENST00000617626 ZNF853P0CG23 659 aa8.48□□□□□ -1.05
U1.41-201ENST00000617626 EIF4A1P60842 406 aaKnown RBP8.48□□□□□ -1.05
U1.41-201ENST00000617626 NBPF14Q5TI25 921 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms