RNA–Protein interactions for RNA: ENST00000616710.4

TNFRSF11A-205, Transcript of TNF receptor superfamily member 11a, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNFRSF11A, Length 3,809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11A-205ENST00000616710 GOLGA6L1Q8N7Z2 621 aa16.6■□□□□ 0.25
TNFRSF11A-205ENST00000616710 WDR7Q9Y4E6 1490 aa16.59■□□□□ 0.25
TNFRSF11A-205ENST00000616710 ANKRD65E5RJM6 399 aa16.59■□□□□ 0.25
TNFRSF11A-205ENST00000616710 TTLL5Q6EMB2 1281 aa16.59■□□□□ 0.25
TNFRSF11A-205ENST00000616710 FBXO38Q6PIJ6 1188 aa16.59■□□□□ 0.25
TNFRSF11A-205ENST00000616710 DDX11Q96FC9 970 aa16.59■□□□□ 0.25
TNFRSF11A-205ENST00000616710 DDX41Q9UJV9 622 aaKnown RBP16.59■□□□□ 0.25
TNFRSF11A-205ENST00000616710 LRRFIP2Q9Y608 721 aaKnown RBP16.59■□□□□ 0.25
TNFRSF11A-205ENST00000616710 SLFN14P0C7P3 912 aa16.59■□□□□ 0.25
TNFRSF11A-205ENST00000616710 BMS1Q14692 1282 aaKnown RBP16.59■□□□□ 0.25
TNFRSF11A-205ENST00000616710 EFCAB2Q5VUJ9 269 aa16.59■□□□□ 0.25
TNFRSF11A-205ENST00000616710 MBIPQ9NS73 344 aa16.59■□□□□ 0.25
TNFRSF11A-205ENST00000616710 TERF2IPQ9NYB0 399 aa16.59■□□□□ 0.25
TNFRSF11A-205ENST00000616710 POLR3AO14802 1390 aaPredicted RBP16.59■□□□□ 0.25
TNFRSF11A-205ENST00000616710 PDE1AP54750 535 aa16.58■□□□□ 0.25
TNFRSF11A-205ENST00000616710 KMT5BQ4FZB7 885 aa16.58■□□□□ 0.25
TNFRSF11A-205ENST00000616710 SYT10Q6XYQ8 523 aa16.58■□□□□ 0.25
TNFRSF11A-205ENST00000616710 VAMP4O75379 141 aa16.58■□□□□ 0.24
TNFRSF11A-205ENST00000616710 GYS2P54840 703 aa16.58■□□□□ 0.24
TNFRSF11A-205ENST00000616710 HDGFL2Q7Z4V5 671 aaPredicted RBP16.58■□□□□ 0.24
TNFRSF11A-205ENST00000616710 PHACTR3Q96KR7 559 aa16.58■□□□□ 0.24
TNFRSF11A-205ENST00000616710 SDF4Q9BRK5 362 aa16.58■□□□□ 0.24
TNFRSF11A-205ENST00000616710 SURF6O75683 361 aaKnown RBP16.57■□□□□ 0.24
TNFRSF11A-205ENST00000616710 ALDH1L2Q3SY69 923 aa16.57■□□□□ 0.24
TNFRSF11A-205ENST00000616710 ISM2Q6H9L7 571 aa16.57■□□□□ 0.24
TNFRSF11A-205ENST00000616710 MRPL50Q8N5N7 158 aaKnown RBP16.57■□□□□ 0.24
TNFRSF11A-205ENST00000616710 DCTPP1Q9H773 170 aa16.57■□□□□ 0.24
TNFRSF11A-205ENST00000616710 CLEC17AQ6ZS10 378 aa16.57■□□□□ 0.24
TNFRSF11A-205ENST00000616710 ESYT1Q9BSJ8 1104 aa16.57■□□□□ 0.24
TNFRSF11A-205ENST00000616710 ZCCHC17Q9NP64 241 aaKnown RBP16.57■□□□□ 0.24
TNFRSF11A-205ENST00000616710 EVC2Q86UK5 1308 aa16.57■□□□□ 0.24
TNFRSF11A-205ENST00000616710 F13A1P00488 732 aa16.57■□□□□ 0.24
TNFRSF11A-205ENST00000616710 ZSCAN25Q6NSZ9 544 aa16.57■□□□□ 0.24
TNFRSF11A-205ENST00000616710 CACTINQ8WUQ7 758 aaKnown RBP16.56■□□□□ 0.24
TNFRSF11A-205ENST00000616710 LRRCC1Q9C099 1032 aa16.56■□□□□ 0.24
TNFRSF11A-205ENST00000616710 ARHGEF12Q9NZN5 1544 aa16.56■□□□□ 0.24
TNFRSF11A-205ENST00000616710 SCAPERQ9BY12 1400 aa16.56■□□□□ 0.24
TNFRSF11A-205ENST00000616710 SLU7O95391 586 aaKnown RBP16.56■□□□□ 0.24
TNFRSF11A-205ENST00000616710 AP5Z1O43299 807 aa16.56■□□□□ 0.24
TNFRSF11A-205ENST00000616710 STK31Q9BXU1 1019 aa16.56■□□□□ 0.24
TNFRSF11A-205ENST00000616710 RASSF4Q9H2L5 321 aa16.56■□□□□ 0.24
TNFRSF11A-205ENST00000616710 CBX8Q9HC52 389 aa16.56■□□□□ 0.24
TNFRSF11A-205ENST00000616710 LIG1P18858 919 aa16.55■□□□□ 0.24
TNFRSF11A-205ENST00000616710 TPM4P67936 248 aa16.55■□□□□ 0.24
TNFRSF11A-205ENST00000616710 SF3A1Q15459 793 aaKnown RBP16.55■□□□□ 0.24
TNFRSF11A-205ENST00000616710 DRC1Q96MC2 740 aa16.55■□□□□ 0.24
TNFRSF11A-205ENST00000616710 DNAI1Q9UI46 699 aa16.55■□□□□ 0.24
TNFRSF11A-205ENST00000616710 USP27XA6NNY8 438 aa16.55■□□□□ 0.24
TNFRSF11A-205ENST00000616710 PHACTR2O75167 634 aa16.55■□□□□ 0.24
TNFRSF11A-205ENST00000616710 AK2P54819 239 aa16.55■□□□□ 0.24
TNFRSF11A-205ENST00000616710 SNW1Q13573 536 aaKnown RBP16.55■□□□□ 0.24
TNFRSF11A-205ENST00000616710 PRPF40BQ6NWY9 871 aaKnown RBP16.55■□□□□ 0.24
TNFRSF11A-205ENST00000616710 CREBRFQ8IUR6 639 aa16.55■□□□□ 0.24
TNFRSF11A-205ENST00000616710 CCDC69A6NI79 296 aa16.55■□□□□ 0.24
TNFRSF11A-205ENST00000616710 PDILTQ8N807 584 aa16.55■□□□□ 0.24
TNFRSF11A-205ENST00000616710 BIN1O00499 593 aa16.54■□□□□ 0.24
TNFRSF11A-205ENST00000616710 MCM10Q7L590 875 aa16.54■□□□□ 0.24
TNFRSF11A-205ENST00000616710 CWC15Q9P013 229 aaKnown RBP16.54■□□□□ 0.24
TNFRSF11A-205ENST00000616710 LEKR1Q6ZMV7 388 aa16.54■□□□□ 0.24
TNFRSF11A-205ENST00000616710 ANKRD7Q92527 254 aa16.54■□□□□ 0.24
TNFRSF11A-205ENST00000616710 SPTLC3Q9NUV7 552 aa16.54■□□□□ 0.24
TNFRSF11A-205ENST00000616710 ZMYM3Q14202 1370 aa16.54■□□□□ 0.24
TNFRSF11A-205ENST00000616710 FAM135AQ9P2D6 1515 aa16.53■□□□□ 0.24
TNFRSF11A-205ENST00000616710 TRIM66O15016 1216 aa16.53■□□□□ 0.24
TNFRSF11A-205ENST00000616710 HSP90AA4PQ58FG1 418 aa16.53■□□□□ 0.24
TNFRSF11A-205ENST00000616710 RPAP2Q8IXW5 612 aaPredicted RBP16.53■□□□□ 0.24
TNFRSF11A-205ENST00000616710 DNMT1P26358 1616 aaKnown RBP16.53■□□□□ 0.24
TNFRSF11A-205ENST00000616710 ZKSCAN1P17029 563 aaPredicted RBP16.53■□□□□ 0.24
TNFRSF11A-205ENST00000616710 SRRTQ9BXP5 876 aaKnown RBP16.53■□□□□ 0.24
TNFRSF11A-205ENST00000616710 PDRG1Q9NUG6 133 aa16.53■□□□□ 0.24
TNFRSF11A-205ENST00000616710 LIMCH1Q9UPQ0 1083 aa16.53■□□□□ 0.24
TNFRSF11A-205ENST00000616710 SEC31AO94979 1220 aaKnown RBP16.53■□□□□ 0.24
TNFRSF11A-205ENST00000616710 MCM6Q14566 821 aa16.53■□□□□ 0.24
TNFRSF11A-205ENST00000616710 SCAF11Q99590 1463 aaKnown RBP16.52■□□□□ 0.24
TNFRSF11A-205ENST00000616710 C14orf37Q86TY3 774 aa16.52■□□□□ 0.24
TNFRSF11A-205ENST00000616710 STK11IPQ8N1F8 1099 aa16.52■□□□□ 0.24
TNFRSF11A-205ENST00000616710 ABCC11Q96J66 1382 aa16.52■□□□□ 0.24
TNFRSF11A-205ENST00000616710 RAD51AP2Q09MP3 1159 aa16.52■□□□□ 0.24
TNFRSF11A-205ENST00000616710 RRS1Q15050 365 aaKnown RBP16.52■□□□□ 0.24
TNFRSF11A-205ENST00000616710 RSPH4AQ5TD94 716 aa16.52■□□□□ 0.24
TNFRSF11A-205ENST00000616710 CEP85Q6P2H3 762 aa16.52■□□□□ 0.24
TNFRSF11A-205ENST00000616710 POLR1AO95602 1720 aaPredicted RBP16.51■□□□□ 0.23
TNFRSF11A-205ENST00000616710 CCDC73Q6ZRK6 1079 aa16.51■□□□□ 0.23
TNFRSF11A-205ENST00000616710 EPC1Q9H2F5 836 aa16.51■□□□□ 0.23
TNFRSF11A-205ENST00000616710 GUCY1B3Q02153 619 aa16.51■□□□□ 0.23
TNFRSF11A-205ENST00000616710 AK7Q96M32 723 aa16.51■□□□□ 0.23
TNFRSF11A-205ENST00000616710 ANKRD44Q8N8A2 993 aa16.51■□□□□ 0.23
TNFRSF11A-205ENST00000616710 TMC6Q7Z403 805 aa16.5■□□□□ 0.23
TNFRSF11A-205ENST00000616710 ZNF75DP51815 510 aa16.5■□□□□ 0.23
TNFRSF11A-205ENST00000616710 E2F4Q16254 413 aa16.5■□□□□ 0.23
TNFRSF11A-205ENST00000616710 KINO60870 393 aaKnown RBP16.5■□□□□ 0.23
TNFRSF11A-205ENST00000616710 EIF2S2P20042 333 aaKnown RBP16.5■□□□□ 0.23
TNFRSF11A-205ENST00000616710 PTPN21Q16825 1174 aa16.5■□□□□ 0.23
TNFRSF11A-205ENST00000616710 NOM1Q5C9Z4 860 aaKnown RBP16.5■□□□□ 0.23
TNFRSF11A-205ENST00000616710 SIL1Q9H173 461 aa16.5■□□□□ 0.23
TNFRSF11A-205ENST00000616710 EMILIN1Q9Y6C2 1016 aa16.5■□□□□ 0.23
TNFRSF11A-205ENST00000616710 CCDC102AQ96A19 550 aa16.49■□□□□ 0.23
TNFRSF11A-205ENST00000616710 TSPYL1Q9H0U9 437 aa16.49■□□□□ 0.23
TNFRSF11A-205ENST00000616710 CYP46A1Q9Y6A2 500 aa16.49■□□□□ 0.23
TNFRSF11A-205ENST00000616710 CCDC141Q6ZP82 1450 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms