RNA–Protein interactions for RNA: ENST00000614402.4

PMPCA-208, Transcript of peptidase, mitochondrial processing alpha subunit, human

TSL 2

Gene PMPCA, Length 505 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PMPCA-208	ENST00000614402	PELP1	Q8IZL8	1130 aa	Known RBP	27.9	■■■□□ 2.06
PMPCA-208	ENST00000614402	CD2AP	Q9Y5K6	639 aa		27.9	■■■□□ 2.06
PMPCA-208	ENST00000614402	ERVV-2	B6SEH9	535 aa		27.89	■■■□□ 2.06
PMPCA-208	ENST00000614402	DCAF5	Q96JK2	942 aa		27.89	■■■□□ 2.06
PMPCA-208	ENST00000614402	KNSTRN	Q9Y448	316 aa		27.89	■■■□□ 2.06
PMPCA-208	ENST00000614402	HSP90AB1	P08238	724 aa	Known RBP	27.88	■■■□□ 2.05
PMPCA-208	ENST00000614402	ATP6V1A	P38606	617 aa		27.88	■■■□□ 2.05
PMPCA-208	ENST00000614402	PLEKHO1	Q53GL0	409 aa	Predicted RBP	27.88	■■■□□ 2.05
PMPCA-208	ENST00000614402	AMER1	Q5JTC6	1135 aa	Predicted RBP	27.88	■■■□□ 2.05
PMPCA-208	ENST00000614402	AEBP1	Q8IUX7	1158 aa		27.88	■■■□□ 2.05
PMPCA-208	ENST00000614402	AMOT	Q4VCS5	1084 aa		27.87	■■■□□ 2.05
PMPCA-208	ENST00000614402	KIF7	Q2M1P5	1343 aa		27.87	■■■□□ 2.05
PMPCA-208	ENST00000614402	COL5A3	P25940	1745 aa	Predicted RBP	27.85	■■■□□ 2.05
PMPCA-208	ENST00000614402	GNPAT	O15228	680 aa		27.85	■■■□□ 2.05
PMPCA-208	ENST00000614402	ZNF530	Q6P9A1	599 aa	Predicted RBP	27.85	■■■□□ 2.05
PMPCA-208	ENST00000614402	SLC4A9	Q96Q91	983 aa		27.85	■■■□□ 2.05
PMPCA-208	ENST00000614402	IL13	P35225	146 aa		27.84	■■■□□ 2.05
PMPCA-208	ENST00000614402	GRIN3B	O60391	1043 aa		27.83	■■■□□ 2.05
PMPCA-208	ENST00000614402	SULT6B1	Q6IMI4	303 aa		27.81	■■■□□ 2.04
PMPCA-208	ENST00000614402	CABP4	P57796	275 aa		27.78	■■■□□ 2.04
PMPCA-208	ENST00000614402	CNTNAP4	Q9C0A0	1308 aa		27.77	■■■□□ 2.04
PMPCA-208	ENST00000614402	PER1	O15534	1290 aa	Predicted RBP	27.77	■■■□□ 2.04
PMPCA-208	ENST00000614402	MTHFS	P49914	203 aa		27.77	■■■□□ 2.04
PMPCA-208	ENST00000614402	C1orf141	Q5JVX7	400 aa		27.77	■■■□□ 2.04
PMPCA-208	ENST00000614402	RBM42	Q9BTD8	480 aa	Known RBP	27.77	■■■□□ 2.04
PMPCA-208	ENST00000614402	CIC	Q96RK0	1608 aa	Predicted RBP	27.77	■■■□□ 2.04
PMPCA-208	ENST00000614402	SCN11A	Q9UI33	1791 aa		27.76	■■■□□ 2.03
PMPCA-208	ENST00000614402	RC3H1	Q5TC82	1133 aa	Known RBP	27.76	■■■□□ 2.03
PMPCA-208	ENST00000614402	RTCB	Q9Y3I0	505 aa	Known RBP	27.75	■■■□□ 2.03
PMPCA-208	ENST00000614402	MYH14	Q7Z406	1995 aa	Known RBP	27.74	■■■□□ 2.03
PMPCA-208	ENST00000614402	KIF13B	Q9NQT8	1826 aa		27.74	■■■□□ 2.03
PMPCA-208	ENST00000614402	ADRA2B	P18089	450 aa		27.73	■■■□□ 2.03
PMPCA-208	ENST00000614402	C4A	P0C0L4	1744 aa		27.72	■■■□□ 2.03
PMPCA-208	ENST00000614402	TJP1	Q07157	1748 aa		27.72	■■■□□ 2.03
PMPCA-208	ENST00000614402	MMP10	P09238	476 aa		27.72	■■■□□ 2.03
PMPCA-208	ENST00000614402	TRAPPC3L	Q5T215	181 aa		27.72	■■■□□ 2.03
PMPCA-208	ENST00000614402	NFATC2IP	Q8NCF5	419 aa		27.72	■■■□□ 2.03
PMPCA-208	ENST00000614402	C1QTNF8	P60827	252 aa		27.71	■■■□□ 2.03
PMPCA-208	ENST00000614402	KIAA1551	Q9HCM1	1747 aa		27.71	■■■□□ 2.03
PMPCA-208	ENST00000614402	RPS6KA4	O75676	772 aa		27.7	■■■□□ 2.02
PMPCA-208	ENST00000614402	ARHGEF1	Q92888	912 aa	Known RBP	27.7	■■■□□ 2.02
PMPCA-208	ENST00000614402	MRC1	P22897	1456 aa		27.7	■■■□□ 2.02
PMPCA-208	ENST00000614402	AKAP4	Q5JQC9	854 aa		27.69	■■■□□ 2.02
PMPCA-208	ENST00000614402	PTCD1	O75127	700 aa	Known RBP	27.68	■■■□□ 2.02
PMPCA-208	ENST00000614402	ADAMTS7	Q9UKP4	1686 aa		27.68	■■■□□ 2.02
PMPCA-208	ENST00000614402	NLGN1	Q8N2Q7	840 aa		27.67	■■■□□ 2.02
PMPCA-208	ENST00000614402	ADCY9	O60503	1353 aa		27.67	■■■□□ 2.02
PMPCA-208	ENST00000614402	PXDNL	A1KZ92	1463 aa		27.67	■■■□□ 2.02
PMPCA-208	ENST00000614402	C10orf71	Q711Q0	1435 aa		27.67	■■■□□ 2.02
PMPCA-208	ENST00000614402	NPC1L1	Q9UHC9	1359 aa		27.66	■■■□□ 2.02
PMPCA-208	ENST00000614402	GYS1	P13807	737 aa		27.66	■■■□□ 2.02
PMPCA-208	ENST00000614402	CC2D1B	Q5T0F9	858 aa	Known RBP	27.66	■■■□□ 2.02
PMPCA-208	ENST00000614402	ATP10D	Q9P241	1426 aa		27.66	■■■□□ 2.02
PMPCA-208	ENST00000614402	COL3A1	P02461	1466 aa	Predicted RBP	27.65	■■■□□ 2.02
PMPCA-208	ENST00000614402	GIGYF1	O75420	1035 aa	Predicted RBP	27.65	■■■□□ 2.02
PMPCA-208	ENST00000614402	HMOX1	P09601	288 aa		27.65	■■■□□ 2.02
PMPCA-208	ENST00000614402	VIRMA	Q69YN4	1812 aa	Known RBP	27.64	■■■□□ 2.02
PMPCA-208	ENST00000614402	CRKL	P46109	303 aa	Known RBP	27.64	■■■□□ 2.02
PMPCA-208	ENST00000614402	SLC52A2	Q9HAB3	445 aa		27.64	■■■□□ 2.02
PMPCA-208	ENST00000614402	WWC3	Q9ULE0	1092 aa		27.64	■■■□□ 2.02
PMPCA-208	ENST00000614402	RFC4	P35249	363 aa		27.63	■■■□□ 2.01
PMPCA-208	ENST00000614402	LGR6	Q9HBX8	967 aa		27.63	■■■□□ 2.01
PMPCA-208	ENST00000614402	DIAPH1	O60610	1272 aa	Known RBP	27.62	■■■□□ 2.01
PMPCA-208	ENST00000614402	N4BP2	Q86UW6	1770 aa	Predicted RBP	27.61	■■■□□ 2.01
PMPCA-208	ENST00000614402	RNMT	O43148	476 aa	Known RBP	27.6	■■■□□ 2.01
PMPCA-208	ENST00000614402	TGFB2	P61812	414 aa		27.6	■■■□□ 2.01
PMPCA-208	ENST00000614402	KCP	Q6ZWJ8	1503 aa		27.6	■■■□□ 2.01
PMPCA-208	ENST00000614402	MTHFSD	Q2M296	383 aa	Known RBP	27.59	■■■□□ 2.01
PMPCA-208	ENST00000614402	INTS5	Q6P9B9	1019 aa	Known RBP	27.59	■■■□□ 2.01
PMPCA-208	ENST00000614402	USP42	Q9H9J4	1324 aa	Known RBP	27.59	■■■□□ 2.01
PMPCA-208	ENST00000614402	SENP3-EIF4A1	A0A087X0R7	540 aa		27.57	■■■□□ 2
PMPCA-208	ENST00000614402	BRCA1	P38398	1863 aa	Known RBP	27.57	■■■□□ 2
PMPCA-208	ENST00000614402	DNAJC10	Q8IXB1	793 aa		27.56	■■■□□ 2
PMPCA-208	ENST00000614402	CCDC87	Q9NVE4	849 aa		27.56	■■■□□ 2
PMPCA-208	ENST00000614402	SRP68	Q9UHB9	627 aa	Known RBP	27.56	■■■□□ 2
PMPCA-208	ENST00000614402	UBR2	Q8IWV8	1755 aa		27.55	■■■□□ 2
PMPCA-208	ENST00000614402	PARP3	Q9Y6F1	533 aa		27.55	■■■□□ 2
PMPCA-208	ENST00000614402	SLC39A6	Q13433	755 aa		27.54	■■■□□ 2
PMPCA-208	ENST00000614402	FKBP8	Q14318	412 aa		27.54	■■■□□ 2
PMPCA-208	ENST00000614402		A0A0G2JLW4	131 aa		27.53	■■■□□ 2
PMPCA-208	ENST00000614402	SOS1	Q07889	1333 aa	Predicted RBP	27.52	■■■□□ 2
PMPCA-208	ENST00000614402	CYP19A1	P11511	503 aa	Predicted RBP	27.51	■■□□□ 1.99
PMPCA-208	ENST00000614402	DPEP1	P16444	411 aa		27.51	■■□□□ 1.99
PMPCA-208	ENST00000614402	DDR1	Q08345	913 aa		27.51	■■□□□ 1.99
PMPCA-208	ENST00000614402	GPBP1L1	Q9HC44	474 aa	Predicted RBP	27.51	■■□□□ 1.99
PMPCA-208	ENST00000614402	KCNA3	P22001	575 aa		27.49	■■□□□ 1.99
PMPCA-208	ENST00000614402	BCS1L	Q9Y276	419 aa		27.49	■■□□□ 1.99
PMPCA-208	ENST00000614402	VSIG10	Q8N0Z9	540 aa		27.48	■■□□□ 1.99
PMPCA-208	ENST00000614402	SIPA1L3	O60292	1781 aa	Predicted RBP	27.48	■■□□□ 1.99
PMPCA-208	ENST00000614402	CNGB1	Q14028	1251 aa	Predicted RBP	27.47	■■□□□ 1.99
PMPCA-208	ENST00000614402	ARFGEF1	Q9Y6D6	1849 aa		27.46	■■□□□ 1.99
PMPCA-208	ENST00000614402	POLRMT	O00411	1230 aa	Known RBP	27.46	■■□□□ 1.99
PMPCA-208	ENST00000614402	U2SURP	O15042	1029 aa	Known RBP	27.46	■■□□□ 1.99
PMPCA-208	ENST00000614402	TM4SF1	P30408	202 aa		27.46	■■□□□ 1.99
PMPCA-208	ENST00000614402	ZBTB1	Q9Y2K1	713 aa		27.46	■■□□□ 1.99
PMPCA-208	ENST00000614402	COL15A1	P39059	1388 aa		27.46	■■□□□ 1.99
PMPCA-208	ENST00000614402	USPL1	Q5W0Q7	1092 aa		27.45	■■□□□ 1.98
PMPCA-208	ENST00000614402	ZNF526	Q8TF50	670 aa	Predicted RBP	27.45	■■□□□ 1.98
PMPCA-208	ENST00000614402	GAS2L2	Q8NHY3	880 aa		27.44	■■□□□ 1.98
PMPCA-208	ENST00000614402	ZPR1	O75312	459 aa		27.43	■■□□□ 1.98

Retrieved 100 of 20,778 RNA–protein pairs in 94.7 ms