RNA–Protein interactions for RNA: ENST00000613795.4

CLCN3-211, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 5 BASIC

Gene CLCN3, Length 5,874 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-211ENST00000613795 SSFA2P28290 1259 aa8.03□□□□□ -1.12
CLCN3-211ENST00000613795 MTHFSP49914 203 aa8.03□□□□□ -1.12
CLCN3-211ENST00000613795 ABTB2Q8N961 1025 aa8.03□□□□□ -1.12
CLCN3-211ENST00000613795 PAIP2Q9BPZ3 127 aaKnown RBP8.03□□□□□ -1.12
CLCN3-211ENST00000613795 NSD2O96028 1365 aa8.03□□□□□ -1.12
CLCN3-211ENST00000613795 RNF187Q5TA31 235 aaPredicted RBP8.03□□□□□ -1.12
CLCN3-211ENST00000613795 FAM177A1Q8N128 213 aaPredicted RBP8.03□□□□□ -1.12
CLCN3-211ENST00000613795 PANK2Q9BZ23 570 aa8.03□□□□□ -1.12
CLCN3-211ENST00000613795 EPB41L2O43491 1005 aaKnown RBP8.03□□□□□ -1.12
CLCN3-211ENST00000613795 SNW1Q13573 536 aaKnown RBP8.03□□□□□ -1.12
CLCN3-211ENST00000613795 KCNH5Q8NCM2 988 aa8.03□□□□□ -1.12
CLCN3-211ENST00000613795 EZRP15311 586 aaKnown RBP8.03□□□□□ -1.12
CLCN3-211ENST00000613795 LARP1BQ659C4 914 aaKnown RBP8.03□□□□□ -1.12
CLCN3-211ENST00000613795 ANKLE2Q86XL3 938 aa8.03□□□□□ -1.12
CLCN3-211ENST00000613795 TCP11L2Q8N4U5 519 aa8.03□□□□□ -1.12
CLCN3-211ENST00000613795 GGNBP2Q9H3C7 697 aa8.03□□□□□ -1.12
CLCN3-211ENST00000613795 FAM135AQ9P2D6 1515 aa8.03□□□□□ -1.12
CLCN3-211ENST00000613795 PTPN23Q9H3S7 1636 aa8.02□□□□□ -1.13
CLCN3-211ENST00000613795 FCHSD2O94868 740 aa8.02□□□□□ -1.13
CLCN3-211ENST00000613795 TWISTNBQ3B726 338 aaPredicted RBP8.02□□□□□ -1.13
CLCN3-211ENST00000613795 HSP90AB2PQ58FF8 381 aa8.02□□□□□ -1.13
CLCN3-211ENST00000613795 ANKRD18AQ8IVF6 992 aa8.02□□□□□ -1.13
CLCN3-211ENST00000613795 CCDC150Q8NCX0 1101 aa8.02□□□□□ -1.13
CLCN3-211ENST00000613795 FSD1Q9BTV5 496 aa8.02□□□□□ -1.13
CLCN3-211ENST00000613795 NOL7Q9UMY1 257 aaKnown RBP8.02□□□□□ -1.13
CLCN3-211ENST00000613795 SARNPP82979 210 aaKnown RBP8.02□□□□□ -1.13
CLCN3-211ENST00000613795 WASHC4Q2M389 1173 aa8.02□□□□□ -1.13
CLCN3-211ENST00000613795 CDK19Q9BWU1 502 aa8.02□□□□□ -1.13
CLCN3-211ENST00000613795 NACAP1Q9BZK3 213 aa8.02□□□□□ -1.13
CLCN3-211ENST00000613795 SCAND2PQ9GZW5 306 aaPredicted RBP8.02□□□□□ -1.13
CLCN3-211ENST00000613795 ARFGAP3Q9NP61 516 aa8.02□□□□□ -1.13
CLCN3-211ENST00000613795 CPSF2Q9P2I0 782 aaKnown RBP8.02□□□□□ -1.13
CLCN3-211ENST00000613795 BCAR3O75815 825 aa8.02□□□□□ -1.13
CLCN3-211ENST00000613795 DDX19AQ9NUU7 478 aaKnown RBP8.02□□□□□ -1.13
CLCN3-211ENST00000613795 PEG3Q9GZU2 1588 aa8.01□□□□□ -1.13
CLCN3-211ENST00000613795 PROSER2Q86WR7 435 aaPredicted RBP8.01□□□□□ -1.13
CLCN3-211ENST00000613795 SLU7O95391 586 aaKnown RBP8.01□□□□□ -1.13
CLCN3-211ENST00000613795 PRAM1Q96QH2 718 aa8.01□□□□□ -1.13
CLCN3-211ENST00000613795 WDR97A6NE52 1622 aa8.01□□□□□ -1.13
CLCN3-211ENST00000613795 CDKL5O76039 1030 aa8.01□□□□□ -1.13
CLCN3-211ENST00000613795 TTC39AQ5SRH9 613 aa8.01□□□□□ -1.13
CLCN3-211ENST00000613795 GIGYF2Q6Y7W6 1299 aaKnown RBP8.01□□□□□ -1.13
CLCN3-211ENST00000613795 GBP6Q6ZN66 633 aa8.01□□□□□ -1.13
CLCN3-211ENST00000613795 NEUROD6Q96NK8 337 aa8.01□□□□□ -1.13
CLCN3-211ENST00000613795 PRM3Q9NNZ6 103 aa8.01□□□□□ -1.13
CLCN3-211ENST00000613795 DCAF8L1A6NGE4 600 aa8.01□□□□□ -1.13
CLCN3-211ENST00000613795 HMOX1P09601 288 aa8.01□□□□□ -1.13
CLCN3-211ENST00000613795 ME1P48163 572 aa8.01□□□□□ -1.13
CLCN3-211ENST00000613795 KRT32Q14532 448 aa8.01□□□□□ -1.13
CLCN3-211ENST00000613795 SYTL4Q96C24 671 aaPredicted RBP8.01□□□□□ -1.13
CLCN3-211ENST00000613795 CAMSAP2Q08AD1 1489 aa8.01□□□□□ -1.13
CLCN3-211ENST00000613795 HSPA4P34932 840 aa8.01□□□□□ -1.13
CLCN3-211ENST00000613795 MYRIPQ8NFW9 859 aa8.01□□□□□ -1.13
CLCN3-211ENST00000613795 A0A1B0GUA9 196 aa8□□□□□ -1.13
CLCN3-211ENST00000613795 PRKAR2BP31323 418 aa8□□□□□ -1.13
CLCN3-211ENST00000613795 MAP2K1Q02750 393 aaPredicted RBP8□□□□□ -1.13
CLCN3-211ENST00000613795 ENOX2Q16206 610 aaKnown RBP8□□□□□ -1.13
CLCN3-211ENST00000613795 WWC2Q6AWC2 1192 aa8□□□□□ -1.13
CLCN3-211ENST00000613795 RSPH14Q9UHP6 348 aa8□□□□□ -1.13
CLCN3-211ENST00000613795 CTNNA3Q9UI47 895 aa8□□□□□ -1.13
CLCN3-211ENST00000613795 EPS15P42566 896 aa8□□□□□ -1.13
CLCN3-211ENST00000613795 ESCO1Q5FWF5 840 aa8□□□□□ -1.13
CLCN3-211ENST00000613795 CFAP70Q5T0N1 1121 aa8□□□□□ -1.13
CLCN3-211ENST00000613795 MYCBPQ99417 103 aaPredicted RBP8□□□□□ -1.13
CLCN3-211ENST00000613795 IMMTQ16891 758 aaKnown RBP8□□□□□ -1.13
CLCN3-211ENST00000613795 KIF4BQ2VIQ3 1234 aa8□□□□□ -1.13
CLCN3-211ENST00000613795 MICALL1Q8N3F8 863 aa8□□□□□ -1.13
CLCN3-211ENST00000613795 LRRFIP2Q9Y608 721 aaKnown RBP8□□□□□ -1.13
CLCN3-211ENST00000613795 ATF7IPQ6VMQ6 1270 aa8□□□□□ -1.13
CLCN3-211ENST00000613795 RPAP2Q8IXW5 612 aaPredicted RBP8□□□□□ -1.13
CLCN3-211ENST00000613795 WASF1Q92558 559 aa8□□□□□ -1.13
CLCN3-211ENST00000613795 CABP4P57796 275 aa8□□□□□ -1.13
CLCN3-211ENST00000613795 SNX21Q969T3 373 aa8□□□□□ -1.13
CLCN3-211ENST00000613795 BIVM-ERCC5R4GMW8 1640 aa7.99□□□□□ -1.13
CLCN3-211ENST00000613795 TUBBP07437 444 aa7.99□□□□□ -1.13
CLCN3-211ENST00000613795 SETSIPP0DME0 302 aa7.99□□□□□ -1.13
CLCN3-211ENST00000613795 SLFN5Q08AF3 891 aa7.99□□□□□ -1.13
CLCN3-211ENST00000613795 CFAP100Q494V2 611 aa7.99□□□□□ -1.13
CLCN3-211ENST00000613795 C10orf67Q8IYJ2 551 aa7.99□□□□□ -1.13
CLCN3-211ENST00000613795 LRPPRCP42704 1394 aaKnown RBP7.99□□□□□ -1.13
CLCN3-211ENST00000613795 RAB11FIP3O75154 756 aa7.99□□□□□ -1.13
CLCN3-211ENST00000613795 LIG1P18858 919 aa7.99□□□□□ -1.13
CLCN3-211ENST00000613795 FOSBP53539 338 aa7.99□□□□□ -1.13
CLCN3-211ENST00000613795 DMTNQ08495 405 aa7.99□□□□□ -1.13
CLCN3-211ENST00000613795 SEPT7Q16181 437 aaKnown RBP7.99□□□□□ -1.13
CLCN3-211ENST00000613795 SPECC1LQ69YQ0 1117 aa7.99□□□□□ -1.13
CLCN3-211ENST00000613795 AFAP1Q8N556 730 aa7.99□□□□□ -1.13
CLCN3-211ENST00000613795 KCTD17Q8N5Z5 321 aa7.99□□□□□ -1.13
CLCN3-211ENST00000613795 NCOA1Q15788 1441 aa7.99□□□□□ -1.13
CLCN3-211ENST00000613795 PCF11O94913 1555 aaKnown RBP7.99□□□□□ -1.13
CLCN3-211ENST00000613795 SURF6O75683 361 aaKnown RBP7.99□□□□□ -1.13
CLCN3-211ENST00000613795 CAPN2P17655 700 aa7.99□□□□□ -1.13
CLCN3-211ENST00000613795 STIM1Q13586 685 aa7.99□□□□□ -1.13
CLCN3-211ENST00000613795 NBPF11Q86T75 865 aa7.99□□□□□ -1.13
CLCN3-211ENST00000613795 PPM1EQ8WY54 764 aa7.99□□□□□ -1.13
CLCN3-211ENST00000613795 TOP1P11387 765 aaKnown RBP7.99□□□□□ -1.13
CLCN3-211ENST00000613795 BRPF1P55201 1214 aaPredicted RBP7.99□□□□□ -1.13
CLCN3-211ENST00000613795 EBAG9O00559 213 aa7.98□□□□□ -1.13
CLCN3-211ENST00000613795 CCDC175P0C221 793 aa7.98□□□□□ -1.13
CLCN3-211ENST00000613795 UBE2HP62256 183 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms