RNA–Protein interactions for RNA: ENST00000612121.4

LTBP4-233, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 3

Gene LTBP4, Length 755 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-233ENST00000612121 BCS1LQ9Y276 419 aa21.68■■□□□ 1.06
LTBP4-233ENST00000612121 NMRK2Q9NPI5 230 aa21.67■■□□□ 1.06
LTBP4-233ENST00000612121 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.67■■□□□ 1.06
LTBP4-233ENST00000612121 C10orf71Q711Q0 1435 aa21.66■■□□□ 1.06
LTBP4-233ENST00000612121 ATG3Q9NT62 314 aa21.66■■□□□ 1.06
LTBP4-233ENST00000612121 TMF1P82094 1093 aa21.65■■□□□ 1.06
LTBP4-233ENST00000612121 ARHGAP27Q6ZUM4 889 aa21.65■■□□□ 1.06
LTBP4-233ENST00000612121 NLGN1Q8N2Q7 840 aa21.65■■□□□ 1.06
LTBP4-233ENST00000612121 TRAPPC3LQ5T215 181 aa21.64■■□□□ 1.05
LTBP4-233ENST00000612121 PHKG2P15735 406 aa21.63■■□□□ 1.05
LTBP4-233ENST00000612121 DPEP1P16444 411 aa21.63■■□□□ 1.05
LTBP4-233ENST00000612121 EYA1Q99502 592 aa21.63■■□□□ 1.05
LTBP4-233ENST00000612121 RTCBQ9Y3I0 505 aaKnown RBP21.63■■□□□ 1.05
LTBP4-233ENST00000612121 WDR90Q96KV7 1748 aa21.63■■□□□ 1.05
LTBP4-233ENST00000612121 KDRP35968 1356 aa21.62■■□□□ 1.05
LTBP4-233ENST00000612121 BRCA1P38398 1863 aaKnown RBP21.62■■□□□ 1.05
LTBP4-233ENST00000612121 WASHC2AQ641Q2 1341 aa21.62■■□□□ 1.05
LTBP4-233ENST00000612121 IFNL2Q8IZJ0 200 aa21.62■■□□□ 1.05
LTBP4-233ENST00000612121 RBM46Q8TBY0 533 aaKnown RBP21.62■■□□□ 1.05
LTBP4-233ENST00000612121 SLC4A9Q96Q91 983 aa21.62■■□□□ 1.05
LTBP4-233ENST00000612121 CARD14Q9BXL6 1004 aa21.62■■□□□ 1.05
LTBP4-233ENST00000612121 ANKRD26Q9UPS8 1709 aa21.61■■□□□ 1.05
LTBP4-233ENST00000612121 PPM1GO15355 546 aaPredicted RBP21.61■■□□□ 1.05
LTBP4-233ENST00000612121 FCHSD2O94868 740 aa21.61■■□□□ 1.05
LTBP4-233ENST00000612121 ARHGEF1Q92888 912 aaKnown RBP21.61■■□□□ 1.05
LTBP4-233ENST00000612121 KCNA3P22001 575 aa21.6■■□□□ 1.05
LTBP4-233ENST00000612121 CCDC87Q9NVE4 849 aa21.6■■□□□ 1.05
LTBP4-233ENST00000612121 C4AP0C0L4 1744 aa21.6■■□□□ 1.05
LTBP4-233ENST00000612121 GYS1P13807 737 aa21.59■■□□□ 1.05
LTBP4-233ENST00000612121 ADRA2BP18089 450 aa21.59■■□□□ 1.05
LTBP4-233ENST00000612121 RC3H1Q5TC82 1133 aaKnown RBP21.59■■□□□ 1.05
LTBP4-233ENST00000612121 C9orf131Q5VYM1 1079 aa21.59■■□□□ 1.05
LTBP4-233ENST00000612121 KLRG1Q96E93 195 aa21.59■■□□□ 1.05
LTBP4-233ENST00000612121 ZNF831Q5JPB2 1677 aa21.59■■□□□ 1.05
LTBP4-233ENST00000612121 PCNTO95613 3336 aa21.58■■□□□ 1.05
LTBP4-233ENST00000612121 HTRA3P83110 453 aa21.58■■□□□ 1.05
LTBP4-233ENST00000612121 JMYQ8N9B5 988 aa21.58■■□□□ 1.05
LTBP4-233ENST00000612121 ARFGEF1Q9Y6D6 1849 aa21.57■■□□□ 1.04
LTBP4-233ENST00000612121 COL13A1Q5TAT6 717 aaPredicted RBP21.57■■□□□ 1.04
LTBP4-233ENST00000612121 CNTNAP4Q9C0A0 1308 aa21.56■■□□□ 1.04
LTBP4-233ENST00000612121 COL5A3P25940 1745 aaPredicted RBP21.56■■□□□ 1.04
LTBP4-233ENST00000612121 RPS6KA4O75676 772 aa21.56■■□□□ 1.04
LTBP4-233ENST00000612121 CDCA8Q53HL2 280 aa21.56■■□□□ 1.04
LTBP4-233ENST00000612121 PARP3Q9Y6F1 533 aa21.56■■□□□ 1.04
LTBP4-233ENST00000612121 PLEKHG2Q9H7P9 1386 aa21.56■■□□□ 1.04
LTBP4-233ENST00000612121 RFC4P35249 363 aa21.55■■□□□ 1.04
LTBP4-233ENST00000612121 FSTL1Q12841 308 aa21.55■■□□□ 1.04
LTBP4-233ENST00000612121 C16orf71Q8IYS4 520 aaPredicted RBP21.55■■□□□ 1.04
LTBP4-233ENST00000612121 RBM42Q9BTD8 480 aaKnown RBP21.55■■□□□ 1.04
LTBP4-233ENST00000612121 MYH14Q7Z406 1995 aaKnown RBP21.54■■□□□ 1.04
LTBP4-233ENST00000612121 ERVV-2B6SEH9 535 aa21.54■■□□□ 1.04
LTBP4-233ENST00000612121 DCAF5Q96JK2 942 aa21.53■■□□□ 1.04
LTBP4-233ENST00000612121 PIM2Q9P1W9 311 aa21.53■■□□□ 1.04
LTBP4-233ENST00000612121 POLKQ9UBT6 870 aa21.53■■□□□ 1.04
LTBP4-233ENST00000612121 KCPQ6ZWJ8 1503 aa21.53■■□□□ 1.04
LTBP4-233ENST00000612121 KDM2BQ8NHM5 1336 aa21.52■■□□□ 1.03
LTBP4-233ENST00000612121 EIF4A2Q14240 407 aaKnown RBP21.51■■□□□ 1.03
LTBP4-233ENST00000612121 DALRD3Q5D0E6 543 aaKnown RBP21.5■■□□□ 1.03
LTBP4-233ENST00000612121 RRAGCQ9HB90 399 aa21.5■■□□□ 1.03
LTBP4-233ENST00000612121 RNF181Q9P0P0 153 aa21.49■■□□□ 1.03
LTBP4-233ENST00000612121 SBF1O95248 1867 aa21.48■■□□□ 1.03
LTBP4-233ENST00000612121 HSP90AB1P08238 724 aaKnown RBP21.48■■□□□ 1.03
LTBP4-233ENST00000612121 DDR1Q08345 913 aa21.48■■□□□ 1.03
LTBP4-233ENST00000612121 FKBP8Q14318 412 aa21.47■■□□□ 1.03
LTBP4-233ENST00000612121 SRP68Q9UHB9 627 aaKnown RBP21.47■■□□□ 1.03
LTBP4-233ENST00000612121 TNRC6CQ9HCJ0 1690 aaKnown RBP21.47■■□□□ 1.03
LTBP4-233ENST00000612121 KDM6AO15550 1401 aaPredicted RBP21.46■■□□□ 1.03
LTBP4-233ENST00000612121 CAPN15O75808 1086 aa21.45■■□□□ 1.02
LTBP4-233ENST00000612121 CHRNA5P30532 468 aa21.45■■□□□ 1.02
LTBP4-233ENST00000612121 CRKLP46109 303 aaKnown RBP21.45■■□□□ 1.02
LTBP4-233ENST00000612121 CABP4P57796 275 aa21.45■■□□□ 1.02
LTBP4-233ENST00000612121 USP42Q9H9J4 1324 aaKnown RBP21.45■■□□□ 1.02
LTBP4-233ENST00000612121 PLEKHO1Q53GL0 409 aaPredicted RBP21.44■■□□□ 1.02
LTBP4-233ENST00000612121 TNS4Q8IZW8 715 aa21.44■■□□□ 1.02
LTBP4-233ENST00000612121 SMC1BQ8NDV3 1235 aa21.44■■□□□ 1.02
LTBP4-233ENST00000612121 PTCD1O75127 700 aaKnown RBP21.43■■□□□ 1.02
LTBP4-233ENST00000612121 PRELPP51888 382 aa21.42■■□□□ 1.02
LTBP4-233ENST00000612121 ZNF530Q6P9A1 599 aaPredicted RBP21.42■■□□□ 1.02
LTBP4-233ENST00000612121 POLRMTO00411 1230 aaKnown RBP21.41■■□□□ 1.02
LTBP4-233ENST00000612121 TM4SF1P30408 202 aa21.41■■□□□ 1.02
LTBP4-233ENST00000612121 TNNT2P45379 298 aaPredicted RBP21.41■■□□□ 1.02
LTBP4-233ENST00000612121 ADAMTS7Q9UKP4 1686 aa21.4■■□□□ 1.02
LTBP4-233ENST00000612121 AMOTQ4VCS5 1084 aa21.4■■□□□ 1.02
LTBP4-233ENST00000612121 TJP1Q07157 1748 aa21.4■■□□□ 1.02
LTBP4-233ENST00000612121 ZC3H4Q9UPT8 1303 aaKnown RBP21.39■■□□□ 1.01
LTBP4-233ENST00000612121 MTHFSP49914 203 aa21.39■■□□□ 1.01
LTBP4-233ENST00000612121 INTS5Q6P9B9 1019 aaKnown RBP21.39■■□□□ 1.01
LTBP4-233ENST00000612121 NFATC2IPQ8NCF5 419 aa21.39■■□□□ 1.01
LTBP4-233ENST00000612121 RASSF7Q02833 373 aa21.38■■□□□ 1.01
LTBP4-233ENST00000612121 VEGFAP15692 232 aaPredicted RBP21.36■■□□□ 1.01
LTBP4-233ENST00000612121 GLTPD2A6NH11 291 aa21.35■■□□□ 1.01
LTBP4-233ENST00000612121 LMNB1P20700 586 aa21.35■■□□□ 1.01
LTBP4-233ENST00000612121 USPL1Q5W0Q7 1092 aa21.35■■□□□ 1.01
LTBP4-233ENST00000612121 HSPA1AP0DMV8 641 aaKnown RBP21.34■■□□□ 1.01
LTBP4-233ENST00000612121 HSPA1BP0DMV9 641 aaKnown RBP21.34■■□□□ 1.01
LTBP4-233ENST00000612121 C1orf141Q5JVX7 400 aa21.34■■□□□ 1.01
LTBP4-233ENST00000612121 AEBP1Q8IUX7 1158 aa21.34■■□□□ 1.01
LTBP4-233ENST00000612121 AFDNP55196 1824 aaKnown RBP21.34■■□□□ 1.01
LTBP4-233ENST00000612121 ZPR1O75312 459 aa21.33■■□□□ 1.01
LTBP4-233ENST00000612121 SOS1Q07889 1333 aaPredicted RBP21.32■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms