RNA–Protein interactions for RNA: ENST00000611841.1

EP400-208, Transcript of E1A binding protein p400, human

TSL 5

Gene EP400, Length 3,129 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
EP400-208	ENST00000611841	CCDC30	Q5VVM6	783 aa		14	□□□□□ -0.17
EP400-208	ENST00000611841	TSC1	Q92574	1164 aa		14	□□□□□ -0.17
EP400-208	ENST00000611841	GNAT3	A8MTJ3	354 aa		13.99	□□□□□ -0.17
EP400-208	ENST00000611841	ZSCAN20	P17040	1043 aa	Predicted RBP	13.99	□□□□□ -0.17
EP400-208	ENST00000611841	TERF1	P54274	439 aa		13.99	□□□□□ -0.17
EP400-208	ENST00000611841	IL1RAPL2	Q9NP60	686 aa		13.99	□□□□□ -0.17
EP400-208	ENST00000611841	VIRMA	Q69YN4	1812 aa	Known RBP	13.99	□□□□□ -0.17
EP400-208	ENST00000611841	KIF20B	Q96Q89	1820 aa		13.99	□□□□□ -0.17
EP400-208	ENST00000611841	VGLL3	A8MV65	326 aa		13.99	□□□□□ -0.17
EP400-208	ENST00000611841	NEK4	P51957	841 aa		13.99	□□□□□ -0.17
EP400-208	ENST00000611841	PDE1A	P54750	535 aa		13.99	□□□□□ -0.17
EP400-208	ENST00000611841	TPRN	Q4KMQ1	711 aa		13.99	□□□□□ -0.17
EP400-208	ENST00000611841	PPP4R3B	Q5MIZ7	849 aa		13.99	□□□□□ -0.17
EP400-208	ENST00000611841	USP6	P35125	1406 aa		13.99	□□□□□ -0.17
EP400-208	ENST00000611841	SKOR2	Q2VWA4	1001 aa	Predicted RBP	13.98	□□□□□ -0.17
EP400-208	ENST00000611841	ANO2	Q9NQ90	1003 aa		13.98	□□□□□ -0.17
EP400-208	ENST00000611841	SPATA31D1	Q6ZQQ2	1576 aa		13.98	□□□□□ -0.17
EP400-208	ENST00000611841	ERC2	O15083	957 aa		13.98	□□□□□ -0.17
EP400-208	ENST00000611841	FOXD4L6	Q3SYB3	417 aa	Predicted RBP	13.98	□□□□□ -0.17
EP400-208	ENST00000611841	FOXD4L3	Q6VB84	417 aa	Predicted RBP	13.98	□□□□□ -0.17
EP400-208	ENST00000611841	MTERF4	Q7Z6M4	381 aa	Known RBP	13.98	□□□□□ -0.17
EP400-208	ENST00000611841	ZGPAT	Q8N5A5	531 aa	Known RBP	13.98	□□□□□ -0.17
EP400-208	ENST00000611841	AGL	P35573	1532 aa		13.98	□□□□□ -0.17
EP400-208	ENST00000611841	ANKRD26	Q9UPS8	1709 aa		13.97	□□□□□ -0.17
EP400-208	ENST00000611841	PNMA6E	A0A0J9YXQ4	647 aa		13.97	□□□□□ -0.17
EP400-208	ENST00000611841	DYNC1I1	O14576	645 aa		13.97	□□□□□ -0.17
EP400-208	ENST00000611841	KCNA6	P17658	529 aa		13.97	□□□□□ -0.17
EP400-208	ENST00000611841	DDIT3	P35638	169 aa		13.97	□□□□□ -0.17
EP400-208	ENST00000611841	PKP1	Q13835	747 aa		13.97	□□□□□ -0.17
EP400-208	ENST00000611841	LRRCC1	Q9C099	1032 aa		13.97	□□□□□ -0.17
EP400-208	ENST00000611841	LRRFIP2	Q9Y608	721 aa	Known RBP	13.97	□□□□□ -0.17
EP400-208	ENST00000611841	KIAA0232	Q92628	1395 aa		13.97	□□□□□ -0.17
EP400-208	ENST00000611841	IGSF3	O75054	1194 aa		13.97	□□□□□ -0.17
EP400-208	ENST00000611841	MAP4K4	O95819	1239 aa	Predicted RBP	13.97	□□□□□ -0.17
EP400-208	ENST00000611841	HDGFL1	Q5TGJ6	251 aa		13.97	□□□□□ -0.17
EP400-208	ENST00000611841	CCDC94	Q9BW85	323 aa	Predicted RBP	13.97	□□□□□ -0.17
EP400-208	ENST00000611841	BAG4	O95429	457 aa	Known RBP	13.97	□□□□□ -0.17
EP400-208	ENST00000611841	THEMIS	Q8N1K5	641 aa	Predicted RBP	13.97	□□□□□ -0.17
EP400-208	ENST00000611841	IL17RE	Q8NFR9	667 aa		13.97	□□□□□ -0.17
EP400-208	ENST00000611841	FLT4	P35916	1363 aa		13.96	□□□□□ -0.17
EP400-208	ENST00000611841	GNAI3	P08754	354 aa		13.96	□□□□□ -0.17
EP400-208	ENST00000611841	DNTTIP2	Q5QJE6	756 aa	Known RBP	13.96	□□□□□ -0.17
EP400-208	ENST00000611841	CDC42BPG	Q6DT37	1551 aa		13.96	□□□□□ -0.17
EP400-208	ENST00000611841	ADAMTS13	Q76LX8	1427 aa		13.96	□□□□□ -0.17
EP400-208	ENST00000611841	DIP2B	Q9P265	1576 aa		13.96	□□□□□ -0.18
EP400-208	ENST00000611841	ANXA1	P04083	346 aa		13.96	□□□□□ -0.18
EP400-208	ENST00000611841	CHAMP1	Q96JM3	812 aa		13.96	□□□□□ -0.18
EP400-208	ENST00000611841	UBTFL1	P0CB47	393 aa	Predicted RBP	13.95	□□□□□ -0.18
EP400-208	ENST00000611841	NUTM1	Q86Y26	1132 aa		13.95	□□□□□ -0.18
EP400-208	ENST00000611841	PHAX	Q9H814	394 aa	Known RBP	13.95	□□□□□ -0.18
EP400-208	ENST00000611841	TTC21A	Q8NDW8	1320 aa		13.95	□□□□□ -0.18
EP400-208	ENST00000611841	FAM177B	A6PVY3	158 aa		13.95	□□□□□ -0.18
EP400-208	ENST00000611841	SURF6	O75683	361 aa	Known RBP	13.95	□□□□□ -0.18
EP400-208	ENST00000611841	HOXC9	P31274	260 aa		13.95	□□□□□ -0.18
EP400-208	ENST00000611841	TAF7	Q15545	349 aa	Predicted RBP	13.95	□□□□□ -0.18
EP400-208	ENST00000611841	PLCD3	Q8N3E9	789 aa		13.95	□□□□□ -0.18
EP400-208	ENST00000611841	NOL7	Q9UMY1	257 aa	Known RBP	13.95	□□□□□ -0.18
EP400-208	ENST00000611841	PRPF40A	O75400	957 aa	Known RBP	13.95	□□□□□ -0.18
EP400-208	ENST00000611841	MAPK8IP2	Q13387	824 aa	Predicted RBP	13.95	□□□□□ -0.18
EP400-208	ENST00000611841	EIF2AK3	Q9NZJ5	1116 aa	Known RBP	13.95	□□□□□ -0.18
EP400-208	ENST00000611841	TBX22	Q9Y458	520 aa		13.95	□□□□□ -0.18
EP400-208	ENST00000611841	KIF24	Q5T7B8	1368 aa		13.95	□□□□□ -0.18
EP400-208	ENST00000611841	MX1	P20591	662 aa		13.94	□□□□□ -0.18
EP400-208	ENST00000611841	NUCB2	P80303	420 aa		13.94	□□□□□ -0.18
EP400-208	ENST00000611841	UTP14C	Q5TAP6	766 aa	Known RBP	13.94	□□□□□ -0.18
EP400-208	ENST00000611841	CAVIN1	Q6NZI2	390 aa	Known RBP	13.94	□□□□□ -0.18
EP400-208	ENST00000611841	ATP10D	Q9P241	1426 aa		13.94	□□□□□ -0.18
EP400-208	ENST00000611841	MPND	Q8N594	471 aa		13.94	□□□□□ -0.18
EP400-208	ENST00000611841	CRB1	P82279	1406 aa		13.93	□□□□□ -0.18
EP400-208	ENST00000611841	SBNO1	A3KN83	1393 aa		13.93	□□□□□ -0.18
EP400-208	ENST00000611841	OS9	Q13438	667 aa	Predicted RBP	13.93	□□□□□ -0.18
EP400-208	ENST00000611841	UPF3B	Q9BZI7	483 aa	Known RBP	13.93	□□□□□ -0.18
EP400-208	ENST00000611841	PSME1	Q06323	249 aa		13.93	□□□□□ -0.18
EP400-208	ENST00000611841	OVOS2	A0A0J9YW53	1432 aa		13.93	□□□□□ -0.18
EP400-208	ENST00000611841	TECPR2	O15040	1411 aa		13.93	□□□□□ -0.18
EP400-208	ENST00000611841	OVOS2	Q6IE36	1432 aa		13.93	□□□□□ -0.18
EP400-208	ENST00000611841	ZNF500	O60304	480 aa	Predicted RBP	13.92	□□□□□ -0.18
EP400-208	ENST00000611841	TRH	P20396	242 aa	Predicted RBP	13.92	□□□□□ -0.18
EP400-208	ENST00000611841	ATP8B2	P98198	1209 aa		13.92	□□□□□ -0.18
EP400-208	ENST00000611841	ESCO1	Q5FWF5	840 aa		13.92	□□□□□ -0.18
EP400-208	ENST00000611841	SASS6	Q6UVJ0	657 aa		13.92	□□□□□ -0.18
EP400-208	ENST00000611841	RGS12	O14924	1447 aa		13.92	□□□□□ -0.18
EP400-208	ENST00000611841	PTPRU	Q92729	1446 aa		13.92	□□□□□ -0.18
EP400-208	ENST00000611841	PLEKHG1	Q9ULL1	1385 aa		13.92	□□□□□ -0.18
EP400-208	ENST00000611841	IGSF1	Q8N6C5	1336 aa		13.92	□□□□□ -0.18
EP400-208	ENST00000611841	MCC	P23508	829 aa		13.92	□□□□□ -0.18
EP400-208	ENST00000611841	LGR6	Q9HBX8	967 aa		13.92	□□□□□ -0.18
EP400-208	ENST00000611841	SPDYE4	A6NLX3	237 aa		13.91	□□□□□ -0.18
EP400-208	ENST00000611841	TEF	Q10587	303 aa		13.91	□□□□□ -0.18
EP400-208	ENST00000611841	RBSN	Q9H1K0	784 aa		13.91	□□□□□ -0.18
EP400-208	ENST00000611841	RIMBP3C	A6NJZ7	1639 aa		13.91	□□□□□ -0.18
EP400-208	ENST00000611841	RIMBP3B	A6NNM3	1639 aa		13.91	□□□□□ -0.18
EP400-208	ENST00000611841	RIMBP3	Q9UFD9	1639 aa		13.91	□□□□□ -0.18
EP400-208	ENST00000611841	ZBTB22	O15209	634 aa		13.91	□□□□□ -0.18
EP400-208	ENST00000611841	ARHGEF10	O15013	1369 aa		13.91	□□□□□ -0.18
EP400-208	ENST00000611841	NCOA3	Q9Y6Q9	1424 aa		13.9	□□□□□ -0.18
EP400-208	ENST00000611841	SRGAP3	O43295	1099 aa		13.9	□□□□□ -0.18
EP400-208	ENST00000611841	PTMS	P20962	102 aa		13.9	□□□□□ -0.18
EP400-208	ENST00000611841	CSPP1	Q1MSJ5	1256 aa		13.9	□□□□□ -0.18
EP400-208	ENST00000611841	USP44	Q9H0E7	712 aa		13.9	□□□□□ -0.18

Retrieved 100 of 20,778 RNA–protein pairs in 99.1 ms