RNA–Protein interactions for RNA: ENST00000611833.4

NEK3-206, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,345 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-206ENST00000611833 FSD2A1L4K1 749 aa21.23■□□□□ 0.99
NEK3-206ENST00000611833 TRHP20396 242 aaPredicted RBP21.23■□□□□ 0.99
NEK3-206ENST00000611833 NFAT5O94916 1531 aa21.23■□□□□ 0.99
NEK3-206ENST00000611833 IP6K1Q92551 441 aa21.22■□□□□ 0.99
NEK3-206ENST00000611833 BABAM1Q9NWV8 329 aa21.22■□□□□ 0.99
NEK3-206ENST00000611833 CACNA1FO60840 1977 aa21.22■□□□□ 0.99
NEK3-206ENST00000611833 SOS1Q07889 1333 aaPredicted RBP21.21■□□□□ 0.99
NEK3-206ENST00000611833 XRCC6P12956 609 aaKnown RBP eCLIP21.21■□□□□ 0.99
NEK3-206ENST00000611833 REC8O95072 547 aa21.21■□□□□ 0.99
NEK3-206ENST00000611833 GNAI3P08754 354 aa21.21■□□□□ 0.99
NEK3-206ENST00000611833 NBPF6Q5VWK0 638 aa21.2■□□□□ 0.98
NEK3-206ENST00000611833 NBPF4Q96M43 638 aa21.2■□□□□ 0.98
NEK3-206ENST00000611833 EXOC6BQ9Y2D4 811 aa21.2■□□□□ 0.98
NEK3-206ENST00000611833 ZNF142P52746 1687 aaPredicted RBP21.2■□□□□ 0.98
NEK3-206ENST00000611833 PTMSP20962 102 aa21.2■□□□□ 0.98
NEK3-206ENST00000611833 PDE1AP54750 535 aa21.2■□□□□ 0.98
NEK3-206ENST00000611833 FAM43AQ8N2R8 423 aa21.2■□□□□ 0.98
NEK3-206ENST00000611833 ESCO1Q5FWF5 840 aa21.19■□□□□ 0.98
NEK3-206ENST00000611833 OSBPL3Q9H4L5 887 aa21.19■□□□□ 0.98
NEK3-206ENST00000611833 CEMIPQ8WUJ3 1361 aa21.19■□□□□ 0.98
NEK3-206ENST00000611833 ADGRL3Q9HAR2 1447 aa21.19■□□□□ 0.98
NEK3-206ENST00000611833 SETD1BQ9UPS6 1966 aaKnown RBP21.18■□□□□ 0.98
NEK3-206ENST00000611833 N4BP2Q86UW6 1770 aaPredicted RBP21.18■□□□□ 0.98
NEK3-206ENST00000611833 SKOR2Q2VWA4 1001 aaPredicted RBP21.18■□□□□ 0.98
NEK3-206ENST00000611833 PNMA6EA0A0J9YXQ4 647 aa21.18■□□□□ 0.98
NEK3-206ENST00000611833 PSME1Q06323 249 aa21.18■□□□□ 0.98
NEK3-206ENST00000611833 ERC2O15083 957 aa21.17■□□□□ 0.98
NEK3-206ENST00000611833 SSFA2P28290 1259 aa21.17■□□□□ 0.98
NEK3-206ENST00000611833 HDGFL1Q5TGJ6 251 aa21.17■□□□□ 0.98
NEK3-206ENST00000611833 LRRCC1Q9C099 1032 aa21.17■□□□□ 0.98
NEK3-206ENST00000611833 PXDNLA1KZ92 1463 aa21.16■□□□□ 0.98
NEK3-206ENST00000611833 MED1Q15648 1581 aaPredicted RBP21.16■□□□□ 0.98
NEK3-206ENST00000611833 RGPD2P0DJD1 1756 aa21.16■□□□□ 0.98
NEK3-206ENST00000611833 GOLGA6L22H0YM25 854 aa21.16■□□□□ 0.98
NEK3-206ENST00000611833 ST18O60284 1047 aa21.16■□□□□ 0.98
NEK3-206ENST00000611833 MRE11P49959 708 aa21.16■□□□□ 0.98
NEK3-206ENST00000611833 ATP8B2P98198 1209 aa21.16■□□□□ 0.98
NEK3-206ENST00000611833 SALL3Q9BXA9 1300 aa21.16■□□□□ 0.98
NEK3-206ENST00000611833 PHAXQ9H814 394 aaKnown RBP21.15■□□□□ 0.98
NEK3-206ENST00000611833 LGR6Q9HBX8 967 aa21.15■□□□□ 0.98
NEK3-206ENST00000611833 ZBTB7CA1YPR0 619 aa21.15■□□□□ 0.98
NEK3-206ENST00000611833 KCNH5Q8NCM2 988 aa21.15■□□□□ 0.98
NEK3-206ENST00000611833 USP44Q9H0E7 712 aa21.15■□□□□ 0.98
NEK3-206ENST00000611833 LRRFIP2Q9Y608 721 aaKnown RBP21.15■□□□□ 0.98
NEK3-206ENST00000611833 PHRF1Q9P1Y6 1649 aaKnown RBP21.14■□□□□ 0.97
NEK3-206ENST00000611833 TSHZ3Q63HK5 1081 aa21.13■□□□□ 0.97
NEK3-206ENST00000611833 LRRC59Q96AG4 307 aaKnown RBP21.13■□□□□ 0.97
NEK3-206ENST00000611833 PANK2Q9BZ23 570 aa21.13■□□□□ 0.97
NEK3-206ENST00000611833 ISY1Q9ULR0 285 aaKnown RBP21.13■□□□□ 0.97
NEK3-206ENST00000611833 IBTKQ9P2D0 1353 aaPredicted RBP21.13■□□□□ 0.97
NEK3-206ENST00000611833 TUBGCP6Q96RT7 1819 aa21.12■□□□□ 0.97
NEK3-206ENST00000611833 MX1P20591 662 aa21.12■□□□□ 0.97
NEK3-206ENST00000611833 EIF4A1P60842 406 aaKnown RBP21.12■□□□□ 0.97
NEK3-206ENST00000611833 KDM3BQ7LBC6 1761 aa21.12■□□□□ 0.97
NEK3-206ENST00000611833 NUCB2P80303 420 aa21.11■□□□□ 0.97
NEK3-206ENST00000611833 GRPEL1Q9HAV7 217 aa21.11■□□□□ 0.97
NEK3-206ENST00000611833 UBTFL1P0CB47 393 aaPredicted RBP21.11■□□□□ 0.97
NEK3-206ENST00000611833 EIF2S2P20042 333 aaKnown RBP21.11■□□□□ 0.97
NEK3-206ENST00000611833 ORAI2Q96SN7 254 aa21.11■□□□□ 0.97
NEK3-206ENST00000611833 CLEC17AQ6ZS10 378 aa21.1■□□□□ 0.97
NEK3-206ENST00000611833 LMO7Q8WWI1 1683 aa21.1■□□□□ 0.97
NEK3-206ENST00000611833 BAG4O95429 457 aaKnown RBP21.1■□□□□ 0.97
NEK3-206ENST00000611833 TRIM6-TRIM34B2RNG4 842 aa21.09■□□□□ 0.97
NEK3-206ENST00000611833 KCNQ3O43525 872 aa21.09■□□□□ 0.97
NEK3-206ENST00000611833 XPCQ01831 940 aaPredicted RBP21.09■□□□□ 0.97
NEK3-206ENST00000611833 CWC22Q9HCG8 908 aaKnown RBP21.09■□□□□ 0.97
NEK3-206ENST00000611833 RILPL2Q969X0 211 aa21.09■□□□□ 0.97
NEK3-206ENST00000611833 GCP02774 474 aa21.08■□□□□ 0.97
NEK3-206ENST00000611833 AKAP4Q5JQC9 854 aa21.08■□□□□ 0.97
NEK3-206ENST00000611833 ZNF530Q6P9A1 599 aaPredicted RBP21.08■□□□□ 0.97
NEK3-206ENST00000611833 SRCIN1Q9C0H9 1055 aa21.07■□□□□ 0.96
NEK3-206ENST00000611833 CHPF2Q9P2E5 772 aa21.07■□□□□ 0.96
NEK3-206ENST00000611833 NPHP4O75161 1426 aaPredicted RBP21.07■□□□□ 0.96
NEK3-206ENST00000611833 ADAMTSL3P82987 1691 aa21.07■□□□□ 0.96
NEK3-206ENST00000611833 PLEKHG5O94827 1062 aa21.07■□□□□ 0.96
NEK3-206ENST00000611833 HOXB7P09629 217 aa21.07■□□□□ 0.96
NEK3-206ENST00000611833 ARHGEF25Q86VW2 580 aa21.07■□□□□ 0.96
NEK3-206ENST00000611833 ESYT1Q9BSJ8 1104 aa21.07■□□□□ 0.96
NEK3-206ENST00000611833 MPRIPQ6WCQ1 1025 aa21.06■□□□□ 0.96
NEK3-206ENST00000611833 SSH3Q8TE77 659 aa21.06■□□□□ 0.96
NEK3-206ENST00000611833 SLIT3O75094 1523 aa21.06■□□□□ 0.96
NEK3-206ENST00000611833 MCCP23508 829 aa21.06■□□□□ 0.96
NEK3-206ENST00000611833 TEFQ10587 303 aa21.06■□□□□ 0.96
NEK3-206ENST00000611833 BTBD11A6QL63 1104 aa21.05■□□□□ 0.96
NEK3-206ENST00000611833 PLEKHO1Q53GL0 409 aaPredicted RBP21.05■□□□□ 0.96
NEK3-206ENST00000611833 STAP2Q9UGK3 403 aa21.05■□□□□ 0.96
NEK3-206ENST00000611833 DDX49Q9Y6V7 483 aaKnown RBP21.05■□□□□ 0.96
NEK3-206ENST00000611833 PXDNQ92626 1479 aa21.05■□□□□ 0.96
NEK3-206ENST00000611833 NCAPD2Q15021 1401 aa21.04■□□□□ 0.96
NEK3-206ENST00000611833 NEK4P51957 841 aa21.04■□□□□ 0.96
NEK3-206ENST00000611833 MCTP1Q6DN14 999 aa21.04■□□□□ 0.96
NEK3-206ENST00000611833 ZGPATQ8N5A5 531 aaKnown RBP21.04■□□□□ 0.96
NEK3-206ENST00000611833 CHMLP26374 656 aa21.04■□□□□ 0.96
NEK3-206ENST00000611833 PPP1R42Q7Z4L9 355 aa21.04■□□□□ 0.96
NEK3-206ENST00000611833 AK9Q5TCS8 1911 aa21.03■□□□□ 0.96
NEK3-206ENST00000611833 PI4KAP2A4QPH2 592 aa21.03■□□□□ 0.96
NEK3-206ENST00000611833 ANXA1P04083 346 aa21.03■□□□□ 0.96
NEK3-206ENST00000611833 NBPF7P0C2Y1 421 aaPredicted RBP21.03■□□□□ 0.96
NEK3-206ENST00000611833 AMOTQ4VCS5 1084 aa21.03■□□□□ 0.96
NEK3-206ENST00000611833 BEND3Q5T5X7 828 aa21.03■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 92.6 ms