RNA–Protein interactions for RNA: ENST00000611132.4

VPS36-207, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 1 (best) BASIC

Gene VPS36, Length 4,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-207ENST00000611132 ZBTB7BO15156 539 aaPredicted RBP17.31■□□□□ 0.36
VPS36-207ENST00000611132 NLRP6P59044 892 aa17.31■□□□□ 0.36
VPS36-207ENST00000611132 TSHZ3Q63HK5 1081 aa17.31■□□□□ 0.36
VPS36-207ENST00000611132 TXNDC2Q86VQ3 553 aa17.31■□□□□ 0.36
VPS36-207ENST00000611132 ZSCAN22P10073 491 aaPredicted RBP17.3■□□□□ 0.36
VPS36-207ENST00000611132 RALYLQ86SE5 291 aaKnown RBP17.3■□□□□ 0.36
VPS36-207ENST00000611132 LARP6Q9BRS8 491 aaKnown RBP17.3■□□□□ 0.36
VPS36-207ENST00000611132 FYB1O15117 783 aa17.3■□□□□ 0.36
VPS36-207ENST00000611132 ESYT1Q9BSJ8 1104 aa17.3■□□□□ 0.36
VPS36-207ENST00000611132 SETQ01105 290 aaPredicted RBP17.3■□□□□ 0.36
VPS36-207ENST00000611132 MEIS3Q99687 375 aa17.3■□□□□ 0.36
VPS36-207ENST00000611132 DDX19AQ9NUU7 478 aaKnown RBP17.3■□□□□ 0.36
VPS36-207ENST00000611132 SYCP2Q9BX26 1530 aa17.3■□□□□ 0.36
VPS36-207ENST00000611132 ANKRD20A12PQ8NF67 263 aa17.29■□□□□ 0.36
VPS36-207ENST00000611132 NEUROD6Q96NK8 337 aa17.29■□□□□ 0.36
VPS36-207ENST00000611132 AACSQ86V21 672 aa17.29■□□□□ 0.36
VPS36-207ENST00000611132 UBXN4Q92575 508 aa17.29■□□□□ 0.36
VPS36-207ENST00000611132 IPO7O95373 1038 aaKnown RBP17.29■□□□□ 0.36
VPS36-207ENST00000611132 LMBRD1Q9NUN5 540 aa17.29■□□□□ 0.36
VPS36-207ENST00000611132 CNPY2Q9Y2B0 182 aa17.28■□□□□ 0.36
VPS36-207ENST00000611132 FAM83GA6ND36 823 aa17.28■□□□□ 0.36
VPS36-207ENST00000611132 GJB2P29033 226 aa17.28■□□□□ 0.36
VPS36-207ENST00000611132 AKAP17AQ02040 695 aaKnown RBP17.28■□□□□ 0.36
VPS36-207ENST00000611132 NOC3LQ8WTT2 800 aaKnown RBP17.28■□□□□ 0.36
VPS36-207ENST00000611132 AK7Q96M32 723 aa17.28■□□□□ 0.36
VPS36-207ENST00000611132 SERPINC1P01008 464 aa17.28■□□□□ 0.36
VPS36-207ENST00000611132 KRT32Q14532 448 aa17.28■□□□□ 0.36
VPS36-207ENST00000611132 NME9Q86XW9 330 aa17.28■□□□□ 0.36
VPS36-207ENST00000611132 DNAJC2Q99543 621 aaKnown RBP17.28■□□□□ 0.36
VPS36-207ENST00000611132 CCDC61Q9Y6R9 512 aa17.28■□□□□ 0.36
VPS36-207ENST00000611132 USP19O94966 1318 aa17.28■□□□□ 0.36
VPS36-207ENST00000611132 NEMFO60524 1076 aa17.27■□□□□ 0.36
VPS36-207ENST00000611132 C8orf58Q8NAV2 365 aa17.27■□□□□ 0.36
VPS36-207ENST00000611132 INTS4Q96HW7 963 aaKnown RBP17.27■□□□□ 0.36
VPS36-207ENST00000611132 GTPBP4Q9BZE4 634 aaKnown RBP17.27■□□□□ 0.36
VPS36-207ENST00000611132 LRRFIP2Q9Y608 721 aaKnown RBP17.27■□□□□ 0.36
VPS36-207ENST00000611132 DDX54Q8TDD1 881 aaKnown RBP17.27■□□□□ 0.36
VPS36-207ENST00000611132 APPP05067 770 aa17.27■□□□□ 0.35
VPS36-207ENST00000611132 ZNF165P49910 485 aa17.27■□□□□ 0.35
VPS36-207ENST00000611132 TSPYL6Q8N831 410 aa17.27■□□□□ 0.35
VPS36-207ENST00000611132 PAXBP1Q9Y5B6 917 aa17.27■□□□□ 0.35
VPS36-207ENST00000611132 MBD5Q9P267 1494 aa17.26■□□□□ 0.35
VPS36-207ENST00000611132 SAFBQ15424 915 aaKnown RBP eCLIP17.26■□□□□ 0.35
VPS36-207ENST00000611132 NCBP3Q53F19 620 aaKnown RBP17.26■□□□□ 0.35
VPS36-207ENST00000611132 LEKR1Q6ZMV7 388 aa17.26■□□□□ 0.35
VPS36-207ENST00000611132 TTC5Q8N0Z6 440 aa17.26■□□□□ 0.35
VPS36-207ENST00000611132 MAGI2Q86UL8 1455 aa17.26■□□□□ 0.35
VPS36-207ENST00000611132 ABCA5Q8WWZ7 1642 aa17.26■□□□□ 0.35
VPS36-207ENST00000611132 DHX16O60231 1041 aaKnown RBP17.26■□□□□ 0.35
VPS36-207ENST00000611132 PUS7Q96PZ0 661 aaKnown RBP17.26■□□□□ 0.35
VPS36-207ENST00000611132 SFPQP23246 707 aaKnown RBP eCLIP17.25■□□□□ 0.35
VPS36-207ENST00000611132 TMCO3Q6UWJ1 677 aa17.25■□□□□ 0.35
VPS36-207ENST00000611132 FAM200AQ8TCP9 573 aa17.25■□□□□ 0.35
VPS36-207ENST00000611132 SPG7Q9UQ90 795 aa17.25■□□□□ 0.35
VPS36-207ENST00000611132 KDM5BQ9UGL1 1544 aa17.25■□□□□ 0.35
VPS36-207ENST00000611132 ANO10Q9NW15 660 aa17.25■□□□□ 0.35
VPS36-207ENST00000611132 ZNF500O60304 480 aaPredicted RBP17.25■□□□□ 0.35
VPS36-207ENST00000611132 NUTM2GQ5VZR2 741 aa17.25■□□□□ 0.35
VPS36-207ENST00000611132 NFXL1Q6ZNB6 911 aa17.25■□□□□ 0.35
VPS36-207ENST00000611132 NUDT16Q96DE0 195 aaKnown RBP17.25■□□□□ 0.35
VPS36-207ENST00000611132 DDX11Q96FC9 970 aa17.25■□□□□ 0.35
VPS36-207ENST00000611132 DNAJC5BQ9UF47 199 aa17.25■□□□□ 0.35
VPS36-207ENST00000611132 CALCOCO1Q9P1Z2 691 aa17.25■□□□□ 0.35
VPS36-207ENST00000611132 TFIP11Q9UBB9 837 aaKnown RBP17.25■□□□□ 0.35
VPS36-207ENST00000611132 WASHC4Q2M389 1173 aa17.24■□□□□ 0.35
VPS36-207ENST00000611132 ABCC2Q92887 1545 aa17.24■□□□□ 0.35
VPS36-207ENST00000611132 ADAMTS12P58397 1594 aa17.24■□□□□ 0.35
VPS36-207ENST00000611132 CCDC186Q7Z3E2 898 aa17.24■□□□□ 0.35
VPS36-207ENST00000611132 FAM177A1Q8N128 213 aaPredicted RBP17.24■□□□□ 0.35
VPS36-207ENST00000611132 SIL1Q9H173 461 aa17.24■□□□□ 0.35
VPS36-207ENST00000611132 TULP1O00294 542 aaPredicted RBP17.24■□□□□ 0.35
VPS36-207ENST00000611132 FLIIQ13045 1269 aa17.24■□□□□ 0.35
VPS36-207ENST00000611132 CEP85Q6P2H3 762 aa17.24■□□□□ 0.35
VPS36-207ENST00000611132 WAPLQ7Z5K2 1190 aa17.24■□□□□ 0.35
VPS36-207ENST00000611132 ERCC4Q92889 916 aaPredicted RBP17.24■□□□□ 0.35
VPS36-207ENST00000611132 TRMT1Q9NXH9 659 aaKnown RBP17.24■□□□□ 0.35
VPS36-207ENST00000611132 CAVIN2O95810 425 aa17.23■□□□□ 0.35
VPS36-207ENST00000611132 FBLN1P23142 703 aa17.23■□□□□ 0.35
VPS36-207ENST00000611132 JMYQ8N9B5 988 aa17.23■□□□□ 0.35
VPS36-207ENST00000611132 CBFA2T2O43439 604 aa17.23■□□□□ 0.35
VPS36-207ENST00000611132 MYRIPQ8NFW9 859 aa17.23■□□□□ 0.35
VPS36-207ENST00000611132 CTAGE5O15320 804 aa17.23■□□□□ 0.35
VPS36-207ENST00000611132 TRIM35Q9UPQ4 493 aa17.23■□□□□ 0.35
VPS36-207ENST00000611132 BCORL1Q5H9F3 1711 aa17.23■□□□□ 0.35
VPS36-207ENST00000611132 KDM4AO75164 1064 aa17.22■□□□□ 0.35
VPS36-207ENST00000611132 F13A1P00488 732 aa17.22■□□□□ 0.35
VPS36-207ENST00000611132 CEP135Q66GS9 1140 aa17.22■□□□□ 0.35
VPS36-207ENST00000611132 ADGBQ8N7X0 1667 aa17.22■□□□□ 0.35
VPS36-207ENST00000611132 SMTNL1A8MU46 457 aa17.22■□□□□ 0.35
VPS36-207ENST00000611132 PIBF1Q8WXW3 757 aa17.22■□□□□ 0.35
VPS36-207ENST00000611132 TMEM63CQ9P1W3 806 aa17.22■□□□□ 0.35
VPS36-207ENST00000611132 DENND4BO75064 1496 aaPredicted RBP17.21■□□□□ 0.35
VPS36-207ENST00000611132 DISP1Q96F81 1524 aa17.21■□□□□ 0.35
VPS36-207ENST00000611132 KRT222Q8N1A0 295 aa17.21■□□□□ 0.35
VPS36-207ENST00000611132 GNAT3A8MTJ3 354 aa17.2■□□□□ 0.34
VPS36-207ENST00000611132 IDI1Q13907 227 aa17.2■□□□□ 0.34
VPS36-207ENST00000611132 GSDMDP57764 484 aa17.19■□□□□ 0.34
VPS36-207ENST00000611132 DNM1Q05193 864 aaKnown RBP17.19■□□□□ 0.34
VPS36-207ENST00000611132 OTUD7AQ8TE49 926 aaPredicted RBP17.19■□□□□ 0.34
VPS36-207ENST00000611132 ADGRL1O94910 1474 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms