RNA–Protein interactions for RNA: ENST00000606826.5

CSNK1A1-211, Transcript of casein kinase 1 alpha 1, humanhuman

TSL 5

Gene CSNK1A1, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1-211ENST00000606826 PSME1Q06323 249 aa9.77□□□□□ -0.85
CSNK1A1-211ENST00000606826 NCOA4Q13772 614 aa9.77□□□□□ -0.85
CSNK1A1-211ENST00000606826 DEPDC4Q8N2C3 294 aa9.77□□□□□ -0.85
CSNK1A1-211ENST00000606826 NFATC2IPQ8NCF5 419 aa9.77□□□□□ -0.85
CSNK1A1-211ENST00000606826 CNTNAP3BQ96NU0 1288 aa9.77□□□□□ -0.85
CSNK1A1-211ENST00000606826 CNTNAP3Q9BZ76 1288 aa9.77□□□□□ -0.85
CSNK1A1-211ENST00000606826 CUEDC1Q9NWM3 386 aaPredicted RBP9.77□□□□□ -0.85
CSNK1A1-211ENST00000606826 NOD1Q9Y239 953 aa9.77□□□□□ -0.85
CSNK1A1-211ENST00000606826 USP17L5A8MUK1 530 aa9.76□□□□□ -0.85
CSNK1A1-211ENST00000606826 INHAP05111 366 aa9.75□□□□□ -0.85
CSNK1A1-211ENST00000606826 SCNN1DP51172 638 aa9.75□□□□□ -0.85
CSNK1A1-211ENST00000606826 WDR44Q5JSH3 913 aa9.75□□□□□ -0.85
CSNK1A1-211ENST00000606826 FHDC1Q9C0D6 1143 aaPredicted RBP9.75□□□□□ -0.85
CSNK1A1-211ENST00000606826 HRH3Q9Y5N1 445 aa9.75□□□□□ -0.85
CSNK1A1-211ENST00000606826 FAM181BA6NEQ2 426 aa9.74□□□□□ -0.85
CSNK1A1-211ENST00000606826 LZTS3O60299 673 aaPredicted RBP9.74□□□□□ -0.85
CSNK1A1-211ENST00000606826 SERTAD1Q9UHV2 236 aa9.74□□□□□ -0.85
CSNK1A1-211ENST00000606826 H7C1W4 665 aa9.73□□□□□ -0.85
CSNK1A1-211ENST00000606826 GTF2IP78347 998 aa9.73□□□□□ -0.85
CSNK1A1-211ENST00000606826 KRT76Q01546 638 aa9.73□□□□□ -0.85
CSNK1A1-211ENST00000606826 C4orf17Q53FE4 359 aa9.73□□□□□ -0.85
CSNK1A1-211ENST00000606826 TRIM22Q8IYM9 498 aa9.73□□□□□ -0.85
CSNK1A1-211ENST00000606826 RHBDD1Q8TEB9 315 aa9.73□□□□□ -0.85
CSNK1A1-211ENST00000606826 GLMNQ92990 594 aa9.73□□□□□ -0.85
CSNK1A1-211ENST00000606826 ZNF837Q96EG3 531 aaPredicted RBP9.73□□□□□ -0.85
CSNK1A1-211ENST00000606826 GPAMQ9HCL2 828 aa9.73□□□□□ -0.85
CSNK1A1-211ENST00000606826 RNFT1Q5M7Z0 435 aa9.72□□□□□ -0.85
CSNK1A1-211ENST00000606826 FOXR1Q6PIV2 292 aa9.72□□□□□ -0.85
CSNK1A1-211ENST00000606826 TBC1D9Q6ZT07 1266 aa9.72□□□□□ -0.85
CSNK1A1-211ENST00000606826 FNBP4Q8N3X1 1017 aaPredicted RBP9.72□□□□□ -0.85
CSNK1A1-211ENST00000606826 GMCL1Q96IK5 515 aa9.72□□□□□ -0.85
CSNK1A1-211ENST00000606826 UCN2Q96RP3 112 aa9.72□□□□□ -0.85
CSNK1A1-211ENST00000606826 A0A1B0GTH6 734 aa9.71□□□□□ -0.86
CSNK1A1-211ENST00000606826 USP17L3A6NCW0 530 aa9.71□□□□□ -0.86
CSNK1A1-211ENST00000606826 USP17L4A6NCW7 530 aa9.71□□□□□ -0.86
CSNK1A1-211ENST00000606826 A6NJR5 290 aa9.71□□□□□ -0.86
CSNK1A1-211ENST00000606826 F11P03951 625 aa9.71□□□□□ -0.86
CSNK1A1-211ENST00000606826 DBN1Q16643 649 aa9.71□□□□□ -0.86
CSNK1A1-211ENST00000606826 USP17L2Q6R6M4 530 aa9.71□□□□□ -0.86
CSNK1A1-211ENST00000606826 USP17L1Q7RTZ2 530 aa9.71□□□□□ -0.86
CSNK1A1-211ENST00000606826 PPARGC1BQ86YN6 1023 aaKnown RBP9.71□□□□□ -0.86
CSNK1A1-211ENST00000606826 PCDHGA11Q9Y5H2 935 aa9.71□□□□□ -0.86
CSNK1A1-211ENST00000606826 GPR25O00155 361 aa9.7□□□□□ -0.86
CSNK1A1-211ENST00000606826 ATP9BO43861 1147 aa9.7□□□□□ -0.86
CSNK1A1-211ENST00000606826 LORP23490 312 aaPredicted RBP9.7□□□□□ -0.86
CSNK1A1-211ENST00000606826 PLA2G4AP47712 749 aa9.7□□□□□ -0.86
CSNK1A1-211ENST00000606826 SMTNP53814 917 aa9.7□□□□□ -0.86
CSNK1A1-211ENST00000606826 TRIM50Q86XT4 487 aa9.7□□□□□ -0.86
CSNK1A1-211ENST00000606826 GTPBP3Q969Y2 492 aaKnown RBP9.7□□□□□ -0.86
CSNK1A1-211ENST00000606826 NUCKS1Q9H1E3 243 aaKnown RBP9.7□□□□□ -0.86
CSNK1A1-211ENST00000606826 TMEM229AB2RXF0 380 aa9.69□□□□□ -0.86
CSNK1A1-211ENST00000606826 CALR3Q96L12 384 aaKnown RBP9.69□□□□□ -0.86
CSNK1A1-211ENST00000606826 TRERF1Q96PN7 1200 aa9.69□□□□□ -0.86
CSNK1A1-211ENST00000606826 CSB-PGBD3P0DP91 1061 aa9.68□□□□□ -0.86
CSNK1A1-211ENST00000606826 PLEKHM2Q8IWE5 1019 aa9.68□□□□□ -0.86
CSNK1A1-211ENST00000606826 PGBD3Q8N328 593 aa9.68□□□□□ -0.86
CSNK1A1-211ENST00000606826 BACH1O14867 736 aa9.67□□□□□ -0.86
CSNK1A1-211ENST00000606826 ATP1A2P50993 1020 aa9.67□□□□□ -0.86
CSNK1A1-211ENST00000606826 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.67□□□□□ -0.86
CSNK1A1-211ENST00000606826 NIFKQ9BYG3 293 aaKnown RBP9.67□□□□□ -0.86
CSNK1A1-211ENST00000606826 A6NJY4 79 aa9.66□□□□□ -0.86
CSNK1A1-211ENST00000606826 MSX1P28360 303 aa9.66□□□□□ -0.86
CSNK1A1-211ENST00000606826 TPCN2Q8NHX9 752 aa9.66□□□□□ -0.86
CSNK1A1-211ENST00000606826 AIDAQ96BJ3 306 aa9.66□□□□□ -0.86
CSNK1A1-211ENST00000606826 RUBCNLQ9H714 662 aa9.66□□□□□ -0.86
CSNK1A1-211ENST00000606826 GAS6Q14393 721 aa9.65□□□□□ -0.86
CSNK1A1-211ENST00000606826 SLC4A9Q96Q91 983 aa9.65□□□□□ -0.86
CSNK1A1-211ENST00000606826 ZNF358Q9NW07 568 aa9.65□□□□□ -0.86
CSNK1A1-211ENST00000606826 CABP1Q9NZU7 370 aa9.65□□□□□ -0.86
CSNK1A1-211ENST00000606826 TFIP11Q9UBB9 837 aaKnown RBP9.65□□□□□ -0.86
CSNK1A1-211ENST00000606826 MKRN1Q9UHC7 482 aaKnown RBP9.65□□□□□ -0.86
CSNK1A1-211ENST00000606826 EFHC2Q5JST6 749 aa9.64□□□□□ -0.87
CSNK1A1-211ENST00000606826 SVOPQ8N4V2 548 aa9.64□□□□□ -0.87
CSNK1A1-211ENST00000606826 DNAAF2Q9NVR5 837 aaKnown RBP9.64□□□□□ -0.87
CSNK1A1-211ENST00000606826 CDK2AP1O14519 115 aa9.63□□□□□ -0.87
CSNK1A1-211ENST00000606826 ADAMTS2O95450 1211 aa9.63□□□□□ -0.87
CSNK1A1-211ENST00000606826 MTFR1Q15390 333 aa9.63□□□□□ -0.87
CSNK1A1-211ENST00000606826 CCDC102BQ68D86 513 aa9.63□□□□□ -0.87
CSNK1A1-211ENST00000606826 OGFOD1Q8N543 542 aa9.63□□□□□ -0.87
CSNK1A1-211ENST00000606826 MBIPQ9NS73 344 aa9.63□□□□□ -0.87
CSNK1A1-211ENST00000606826 KIAA1024Q9UPX6 916 aa9.63□□□□□ -0.87
CSNK1A1-211ENST00000606826 RBM19Q9Y4C8 960 aaKnown RBP9.63□□□□□ -0.87
CSNK1A1-211ENST00000606826 EIF4G1Q04637 1599 aaKnown RBP9.63□□□□□ -0.87
CSNK1A1-211ENST00000606826 CLDN10P78369 228 aa9.62□□□□□ -0.87
CSNK1A1-211ENST00000606826 SRSF11Q05519 484 aaKnown RBP9.62□□□□□ -0.87
CSNK1A1-211ENST00000606826 NBPF1Q3BBV0 1214 aa9.62□□□□□ -0.87
CSNK1A1-211ENST00000606826 ZNF594Q96JF6 807 aaPredicted RBP9.62□□□□□ -0.87
CSNK1A1-211ENST00000606826 MAFBQ9Y5Q3 323 aaPredicted RBP9.62□□□□□ -0.87
CSNK1A1-211ENST00000606826 USP3Q9Y6I4 520 aa9.62□□□□□ -0.87
CSNK1A1-211ENST00000606826 PALM3A6NDB9 673 aaPredicted RBP9.61□□□□□ -0.87
CSNK1A1-211ENST00000606826 ZNF777Q9ULD5 760 aaPredicted RBP9.61□□□□□ -0.87
CSNK1A1-211ENST00000606826 IQSEC3Q9UPP2 1182 aaPredicted RBP9.61□□□□□ -0.87
CSNK1A1-211ENST00000606826 PHF24Q9UPV7 400 aa9.61□□□□□ -0.87
CSNK1A1-211ENST00000606826 SLURP2P0DP57 97 aa9.6□□□□□ -0.87
CSNK1A1-211ENST00000606826 MX2P20592 715 aa9.6□□□□□ -0.87
CSNK1A1-211ENST00000606826 RASA1P20936 1047 aa9.6□□□□□ -0.87
CSNK1A1-211ENST00000606826 LBRQ14739 615 aaKnown RBP9.6□□□□□ -0.87
CSNK1A1-211ENST00000606826 ZNF385CQ66K41 422 aaPredicted RBP9.6□□□□□ -0.87
CSNK1A1-211ENST00000606826 TNS4Q8IZW8 715 aa9.6□□□□□ -0.87
CSNK1A1-211ENST00000606826 C1orf216Q8TAB5 229 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms