RNA–Protein interactions for RNA: ENST00000605895.5

RER1-209, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RER1, Length 3,044 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-209ENST00000605895 TNNT1P13805 278 aa18.53■□□□□ 0.56
RER1-209ENST00000605895 AEBP1Q8IUX7 1158 aa18.53■□□□□ 0.56
RER1-209ENST00000605895 PTCH1Q13635 1447 aa18.53■□□□□ 0.56
RER1-209ENST00000605895 CHMLP26374 656 aa18.52■□□□□ 0.56
RER1-209ENST00000605895 CCDC83Q8IWF9 413 aa18.52■□□□□ 0.56
RER1-209ENST00000605895 ANKRD7Q92527 254 aa18.52■□□□□ 0.56
RER1-209ENST00000605895 CFAP44Q96MT7 982 aa18.52■□□□□ 0.56
RER1-209ENST00000605895 HDGFL2Q7Z4V5 671 aaPredicted RBP18.52■□□□□ 0.56
RER1-209ENST00000605895 RTF1Q92541 710 aaKnown RBP18.52■□□□□ 0.56
RER1-209ENST00000605895 LARGE1O95461 756 aa18.52■□□□□ 0.55
RER1-209ENST00000605895 ZBTB9Q96C00 473 aa18.52■□□□□ 0.55
RER1-209ENST00000605895 PLCH2O75038 1416 aa18.51■□□□□ 0.55
RER1-209ENST00000605895 STX6O43752 255 aa18.51■□□□□ 0.55
RER1-209ENST00000605895 SPG7Q9UQ90 795 aa18.51■□□□□ 0.55
RER1-209ENST00000605895 RTL1A6NKG5 1358 aa18.51■□□□□ 0.55
RER1-209ENST00000605895 ADGRL1O94910 1474 aa18.51■□□□□ 0.55
RER1-209ENST00000605895 ZSCAN22P10073 491 aaPredicted RBP18.51■□□□□ 0.55
RER1-209ENST00000605895 BRPF1P55201 1214 aaPredicted RBP18.51■□□□□ 0.55
RER1-209ENST00000605895 NCBP3Q53F19 620 aaKnown RBP18.51■□□□□ 0.55
RER1-209ENST00000605895 FBXW7Q969H0 707 aa18.51■□□□□ 0.55
RER1-209ENST00000605895 ZNF428Q96B54 188 aa18.51■□□□□ 0.55
RER1-209ENST00000605895 TRIM5Q9C035 493 aa18.51■□□□□ 0.55
RER1-209ENST00000605895 ARID5BQ14865 1188 aa18.5■□□□□ 0.55
RER1-209ENST00000605895 TPD52L1Q16890 204 aaPredicted RBP18.5■□□□□ 0.55
RER1-209ENST00000605895 CHMP4AQ9BY43 222 aa18.5■□□□□ 0.55
RER1-209ENST00000605895 SMC3Q9UQE7 1217 aa18.5■□□□□ 0.55
RER1-209ENST00000605895 UBE2HP62256 183 aa18.5■□□□□ 0.55
RER1-209ENST00000605895 PNMA6EA0A0J9YXQ4 647 aa18.49■□□□□ 0.55
RER1-209ENST00000605895 AK2P54819 239 aa18.49■□□□□ 0.55
RER1-209ENST00000605895 NME9Q86XW9 330 aa18.49■□□□□ 0.55
RER1-209ENST00000605895 NECAB1Q8N987 351 aa18.49■□□□□ 0.55
RER1-209ENST00000605895 CDK19Q9BWU1 502 aa18.49■□□□□ 0.55
RER1-209ENST00000605895 TRMT1Q9NXH9 659 aaKnown RBP18.49■□□□□ 0.55
RER1-209ENST00000605895 A0A087WWV3 80 aa18.49■□□□□ 0.55
RER1-209ENST00000605895 RASEFQ8IZ41 740 aa18.49■□□□□ 0.55
RER1-209ENST00000605895 OGFRQ9NZT2 677 aa18.49■□□□□ 0.55
RER1-209ENST00000605895 TFIP11Q9UBB9 837 aaKnown RBP18.49■□□□□ 0.55
RER1-209ENST00000605895 CTNNA3Q9UI47 895 aa18.49■□□□□ 0.55
RER1-209ENST00000605895 PIK3R4Q99570 1358 aa18.49■□□□□ 0.55
RER1-209ENST00000605895 ATP10DQ9P241 1426 aa18.49■□□□□ 0.55
RER1-209ENST00000605895 QRICH2Q9H0J4 1663 aa18.49■□□□□ 0.55
RER1-209ENST00000605895 MCM2P49736 904 aa18.49■□□□□ 0.55
RER1-209ENST00000605895 KNDC1Q76NI1 1749 aa18.48■□□□□ 0.55
RER1-209ENST00000605895 RPAP1Q9BWH6 1393 aaPredicted RBP18.48■□□□□ 0.55
RER1-209ENST00000605895 NCKAP5LQ9HCH0 1330 aa18.48■□□□□ 0.55
RER1-209ENST00000605895 ZNF853P0CG23 659 aa18.48■□□□□ 0.55
RER1-209ENST00000605895 NSD2O96028 1365 aa18.48■□□□□ 0.55
RER1-209ENST00000605895 COL3A1P02461 1466 aaPredicted RBP18.48■□□□□ 0.55
RER1-209ENST00000605895 CCDC112Q8NEF3 446 aa18.47■□□□□ 0.55
RER1-209ENST00000605895 INTS4Q96HW7 963 aaKnown RBP18.47■□□□□ 0.55
RER1-209ENST00000605895 LRRC7Q96NW7 1537 aa18.47■□□□□ 0.55
RER1-209ENST00000605895 HMMRO75330 724 aa18.47■□□□□ 0.55
RER1-209ENST00000605895 F13A1P00488 732 aa18.47■□□□□ 0.55
RER1-209ENST00000605895 TCEANC2Q96MN5 208 aa18.47■□□□□ 0.55
RER1-209ENST00000605895 TULP4Q9NRJ4 1543 aa18.47■□□□□ 0.55
RER1-209ENST00000605895 LIG1P18858 919 aa18.47■□□□□ 0.55
RER1-209ENST00000605895 GOLGA6L6A8MZA4 724 aa18.46■□□□□ 0.55
RER1-209ENST00000605895 CWC27Q6UX04 472 aaKnown RBP18.46■□□□□ 0.55
RER1-209ENST00000605895 WAPLQ7Z5K2 1190 aa18.46■□□□□ 0.55
RER1-209ENST00000605895 LRRCC1Q9C099 1032 aa18.46■□□□□ 0.55
RER1-209ENST00000605895 MYOM2P54296 1465 aa18.46■□□□□ 0.55
RER1-209ENST00000605895 USP27XA6NNY8 438 aa18.46■□□□□ 0.55
RER1-209ENST00000605895 SLFN14P0C7P3 912 aa18.46■□□□□ 0.55
RER1-209ENST00000605895 GJB2P29033 226 aa18.46■□□□□ 0.55
RER1-209ENST00000605895 RUFY3Q7L099 469 aa18.46■□□□□ 0.55
RER1-209ENST00000605895 CTIFO43310 598 aaKnown RBP18.45■□□□□ 0.54
RER1-209ENST00000605895 CCDC192P0DO97 292 aa18.45■□□□□ 0.54
RER1-209ENST00000605895 CASTP20810 708 aaKnown RBP18.45■□□□□ 0.54
RER1-209ENST00000605895 IRX5P78411 483 aaPredicted RBP18.45■□□□□ 0.54
RER1-209ENST00000605895 ANO6Q4KMQ2 910 aa18.45■□□□□ 0.54
RER1-209ENST00000605895 SULT6B1Q6IMI4 303 aa18.44■□□□□ 0.54
RER1-209ENST00000605895 FUCA2Q9BTY2 467 aa18.44■□□□□ 0.54
RER1-209ENST00000605895 MROH2AA6NES4 1674 aa18.44■□□□□ 0.54
RER1-209ENST00000605895 CERS3Q8IU89 383 aa18.44■□□□□ 0.54
RER1-209ENST00000605895 ZNF215Q9UL58 517 aaPredicted RBP18.43■□□□□ 0.54
RER1-209ENST00000605895 PPRC1Q5VV67 1664 aaKnown RBP18.43■□□□□ 0.54
RER1-209ENST00000605895 VGFO15240 615 aaPredicted RBP18.42■□□□□ 0.54
RER1-209ENST00000605895 IL13P35225 146 aa18.42■□□□□ 0.54
RER1-209ENST00000605895 TYRO3Q06418 890 aa18.42■□□□□ 0.54
RER1-209ENST00000605895 COL9A3Q14050 684 aaPredicted RBP18.42■□□□□ 0.54
RER1-209ENST00000605895 CCDC144BQ3MJ40 725 aa18.42■□□□□ 0.54
RER1-209ENST00000605895 CCDC144CPQ8IYA2 1237 aa18.42■□□□□ 0.54
RER1-209ENST00000605895 CACTINQ8WUQ7 758 aaKnown RBP18.42■□□□□ 0.54
RER1-209ENST00000605895 FEZ1Q99689 392 aa18.42■□□□□ 0.54
RER1-209ENST00000605895 ARHGEF40Q8TER5 1519 aa18.42■□□□□ 0.54
RER1-209ENST00000605895 FOXO3O43524 673 aa18.42■□□□□ 0.54
RER1-209ENST00000605895 CEBPZQ03701 1054 aaKnown RBP18.42■□□□□ 0.54
RER1-209ENST00000605895 KMT5BQ4FZB7 885 aa18.42■□□□□ 0.54
RER1-209ENST00000605895 DACT1Q9NYF0 836 aa18.42■□□□□ 0.54
RER1-209ENST00000605895 SNX14Q9Y5W7 946 aa18.42■□□□□ 0.54
RER1-209ENST00000605895 FAM135BQ49AJ0 1406 aa18.42■□□□□ 0.54
RER1-209ENST00000605895 NUTM2FA1L443 756 aa18.41■□□□□ 0.54
RER1-209ENST00000605895 FOSBP53539 338 aa18.41■□□□□ 0.54
RER1-209ENST00000605895 ELF2Q15723 593 aa18.41■□□□□ 0.54
RER1-209ENST00000605895 FILIP1Q7Z7B0 1213 aa18.41■□□□□ 0.54
RER1-209ENST00000605895 DNAJC25Q9H1X3 360 aa18.41■□□□□ 0.54
RER1-209ENST00000605895 CBX8Q9HC52 389 aa18.41■□□□□ 0.54
RER1-209ENST00000605895 DDX41Q9UJV9 622 aaKnown RBP18.41■□□□□ 0.54
RER1-209ENST00000605895 GOLGA6L4A6NEF3 574 aa18.41■□□□□ 0.54
RER1-209ENST00000605895 ZSCAN25Q6NSZ9 544 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 92.6 ms