RNA–Protein interactions for RNA: ENST00000604911.1

LSM1P2-201, Transcript of LSM1 homolog, mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM1P2, Length 322 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1P2-201ENST00000604911 HRH3Q9Y5N1 445 aa8.4□□□□□ -1.06
LSM1P2-201ENST00000604911 CLSPNQ9HAW4 1339 aa8.39□□□□□ -1.07
LSM1P2-201ENST00000604911 GNRH1P01148 92 aa8.39□□□□□ -1.07
LSM1P2-201ENST00000604911 IGHA1P01876 353 aa8.39□□□□□ -1.07
LSM1P2-201ENST00000604911 THBS1P07996 1170 aa8.39□□□□□ -1.07
LSM1P2-201ENST00000604911 GAS2L1Q99501 681 aaPredicted RBP8.39□□□□□ -1.07
LSM1P2-201ENST00000604911 SNRKQ9NRH2 765 aa8.39□□□□□ -1.07
LSM1P2-201ENST00000604911 ENAMQ9NRM1 1142 aa8.39□□□□□ -1.07
LSM1P2-201ENST00000604911 WASLO00401 505 aaPredicted RBP8.38□□□□□ -1.07
LSM1P2-201ENST00000604911 IL2RAP01589 272 aa8.38□□□□□ -1.07
LSM1P2-201ENST00000604911 BCRP11274 1271 aa8.38□□□□□ -1.07
LSM1P2-201ENST00000604911 GLIPR1L2Q4G1C9 344 aa8.38□□□□□ -1.07
LSM1P2-201ENST00000604911 TAS1R3Q7RTX0 852 aa8.38□□□□□ -1.07
LSM1P2-201ENST00000604911 ACDQ96AP0 544 aa8.38□□□□□ -1.07
LSM1P2-201ENST00000604911 ESYT1Q9BSJ8 1104 aa8.38□□□□□ -1.07
LSM1P2-201ENST00000604911 LRRC4BQ9NT99 713 aa8.38□□□□□ -1.07
LSM1P2-201ENST00000604911 CEP126Q9P2H0 1117 aa8.38□□□□□ -1.07
LSM1P2-201ENST00000604911 F11P03951 625 aa8.37□□□□□ -1.07
LSM1P2-201ENST00000604911 FOXK2Q01167 660 aa8.37□□□□□ -1.07
LSM1P2-201ENST00000604911 TRIM26Q12899 539 aaPredicted RBP8.37□□□□□ -1.07
LSM1P2-201ENST00000604911 GPAT2Q6NUI2 795 aa8.37□□□□□ -1.07
LSM1P2-201ENST00000604911 CNKSR1Q969H4 720 aa8.37□□□□□ -1.07
LSM1P2-201ENST00000604911 CCDC85AQ96PX6 553 aaPredicted RBP8.37□□□□□ -1.07
LSM1P2-201ENST00000604911 TIMMDC1Q9NPL8 285 aa8.37□□□□□ -1.07
LSM1P2-201ENST00000604911 RAB6BQ9NRW1 208 aa8.37□□□□□ -1.07
LSM1P2-201ENST00000604911 TRERF1Q96PN7 1200 aa8.36□□□□□ -1.07
LSM1P2-201ENST00000604911 CDCA7Q9BWT1 371 aaPredicted RBP8.36□□□□□ -1.07
LSM1P2-201ENST00000604911 NUCKS1Q9H1E3 243 aaKnown RBP8.36□□□□□ -1.07
LSM1P2-201ENST00000604911 BCCIPQ9P287 314 aaKnown RBP eCLIP8.36□□□□□ -1.07
LSM1P2-201ENST00000604911 CNTNAP5Q8WYK1 1306 aa8.35□□□□□ -1.07
LSM1P2-201ENST00000604911 CENPCQ03188 943 aa8.35□□□□□ -1.07
LSM1P2-201ENST00000604911 XAGE2Q96GT9 111 aa8.35□□□□□ -1.07
LSM1P2-201ENST00000604911 FHDC1Q9C0D6 1143 aaPredicted RBP8.35□□□□□ -1.07
LSM1P2-201ENST00000604911 APBB1O00213 710 aa8.34□□□□□ -1.07
LSM1P2-201ENST00000604911 MX2P20592 715 aa8.34□□□□□ -1.07
LSM1P2-201ENST00000604911 UBAP2LQ14157 1087 aaKnown RBP8.34□□□□□ -1.07
LSM1P2-201ENST00000604911 ITGB2P05107 769 aa8.33□□□□□ -1.08
LSM1P2-201ENST00000604911 ZEB1P37275 1124 aaPredicted RBP8.33□□□□□ -1.08
LSM1P2-201ENST00000604911 PHTF2Q8N3S3 785 aa8.33□□□□□ -1.08
LSM1P2-201ENST00000604911 CFHR5Q9BXR6 569 aa8.33□□□□□ -1.08
LSM1P2-201ENST00000604911 ESF1Q9H501 851 aaKnown RBP8.33□□□□□ -1.08
LSM1P2-201ENST00000604911 SHROOM4Q9ULL8 1493 aa8.32□□□□□ -1.08
LSM1P2-201ENST00000604911 PHF20L1A8MW92 1017 aa8.32□□□□□ -1.08
LSM1P2-201ENST00000604911 OIP5O43482 229 aa8.32□□□□□ -1.08
LSM1P2-201ENST00000604911 BEND7Q8N7W2 519 aaPredicted RBP8.32□□□□□ -1.08
LSM1P2-201ENST00000604911 DCAF5Q96JK2 942 aa8.32□□□□□ -1.08
LSM1P2-201ENST00000604911 A0A1B0GTH6 734 aa8.31□□□□□ -1.08
LSM1P2-201ENST00000604911 MYCP01106 439 aaPredicted RBP8.31□□□□□ -1.08
LSM1P2-201ENST00000604911 PLA2G4EQ3MJ16 856 aa8.31□□□□□ -1.08
LSM1P2-201ENST00000604911 TSGA10IPQ3SY00 556 aa8.31□□□□□ -1.08
LSM1P2-201ENST00000604911 ZSCAN10Q96SZ4 725 aaPredicted RBP8.31□□□□□ -1.08
LSM1P2-201ENST00000604911 CHIC2Q9UKJ5 165 aa8.31□□□□□ -1.08
LSM1P2-201ENST00000604911 NSFL1CQ9UNZ2 370 aaKnown RBP8.31□□□□□ -1.08
LSM1P2-201ENST00000604911 MAP2K3P46734 347 aa8.3□□□□□ -1.08
LSM1P2-201ENST00000604911 IRF5Q13568 498 aa8.3□□□□□ -1.08
LSM1P2-201ENST00000604911 AAMPQ13685 434 aa8.3□□□□□ -1.08
LSM1P2-201ENST00000604911 LBRQ14739 615 aaKnown RBP8.3□□□□□ -1.08
LSM1P2-201ENST00000604911 NEDD1Q8NHV4 660 aa8.3□□□□□ -1.08
LSM1P2-201ENST00000604911 TBC1D2BQ9UPU7 963 aa8.3□□□□□ -1.08
LSM1P2-201ENST00000604911 PHKA2P46019 1235 aa8.29□□□□□ -1.08
LSM1P2-201ENST00000604911 C4orf17Q53FE4 359 aa8.29□□□□□ -1.08
LSM1P2-201ENST00000604911 OXCT2Q9BYC2 517 aaPredicted RBP8.29□□□□□ -1.08
LSM1P2-201ENST00000604911 GPAMQ9HCL2 828 aa8.29□□□□□ -1.08
LSM1P2-201ENST00000604911 C1orf229Q6ZS94 237 aaPredicted RBP8.28□□□□□ -1.08
LSM1P2-201ENST00000604911 PODNQ7Z5L7 613 aa8.28□□□□□ -1.08
LSM1P2-201ENST00000604911 DHX37Q8IY37 1157 aaKnown RBP8.28□□□□□ -1.08
LSM1P2-201ENST00000604911 ETNK1Q9HBU6 452 aa8.28□□□□□ -1.08
LSM1P2-201ENST00000604911 USP4Q13107 963 aa8.27□□□□□ -1.09
LSM1P2-201ENST00000604911 ESCO1Q5FWF5 840 aa8.27□□□□□ -1.09
LSM1P2-201ENST00000604911 GNASQ5JWF2 1037 aa8.27□□□□□ -1.09
LSM1P2-201ENST00000604911 PPARGC1BQ86YN6 1023 aaKnown RBP8.27□□□□□ -1.09
LSM1P2-201ENST00000604911 KLRG1Q96E93 195 aa8.27□□□□□ -1.09
LSM1P2-201ENST00000604911 NDFIP2Q9NV92 336 aa8.27□□□□□ -1.09
LSM1P2-201ENST00000604911 SHISA8B8ZZ34 492 aa8.26□□□□□ -1.09
LSM1P2-201ENST00000604911 STAU1O95793 577 aaKnown RBP8.26□□□□□ -1.09
LSM1P2-201ENST00000604911 MSX1P28360 303 aa8.26□□□□□ -1.09
LSM1P2-201ENST00000604911 SNRPNP63162 240 aaKnown RBP8.26□□□□□ -1.09
LSM1P2-201ENST00000604911 EIF4G2P78344 907 aaKnown RBP eCLIP8.26□□□□□ -1.09
LSM1P2-201ENST00000604911 TMEM214Q6NUQ4 689 aaKnown RBP8.26□□□□□ -1.09
LSM1P2-201ENST00000604911 SPOCK3Q9BQ16 436 aa8.26□□□□□ -1.09
LSM1P2-201ENST00000604911 DOLKQ9UPQ8 538 aa8.26□□□□□ -1.09
LSM1P2-201ENST00000604911 PHF24Q9UPV7 400 aa8.26□□□□□ -1.09
LSM1P2-201ENST00000604911 MSTNO14793 375 aa8.25□□□□□ -1.09
LSM1P2-201ENST00000604911 PROCP04070 461 aa8.25□□□□□ -1.09
LSM1P2-201ENST00000604911 RHBDD1Q8TEB9 315 aa8.25□□□□□ -1.09
LSM1P2-201ENST00000604911 CRISPLD1Q9H336 500 aa8.25□□□□□ -1.09
LSM1P2-201ENST00000604911 RUBCNLQ9H714 662 aa8.25□□□□□ -1.09
LSM1P2-201ENST00000604911 C2CD2LO14523 706 aa8.24□□□□□ -1.09
LSM1P2-201ENST00000604911 SCNN1DP51172 638 aa8.24□□□□□ -1.09
LSM1P2-201ENST00000604911 GDF2Q9UK05 429 aaPredicted RBP8.24□□□□□ -1.09
LSM1P2-201ENST00000604911 ATXN7L1Q9ULK2 861 aaPredicted RBP8.24□□□□□ -1.09
LSM1P2-201ENST00000604911 CSB-PGBD3P0DP91 1061 aa8.23□□□□□ -1.09
LSM1P2-201ENST00000604911 HOXB4P17483 251 aaPredicted RBP8.23□□□□□ -1.09
LSM1P2-201ENST00000604911 GTF2E1P29083 439 aaPredicted RBP8.23□□□□□ -1.09
LSM1P2-201ENST00000604911 SLFNL1Q499Z3 407 aa8.23□□□□□ -1.09
LSM1P2-201ENST00000604911 RNF135Q8IUD6 432 aa8.23□□□□□ -1.09
LSM1P2-201ENST00000604911 PGBD3Q8N328 593 aa8.23□□□□□ -1.09
LSM1P2-201ENST00000604911 GALNT6Q8NCL4 622 aa8.23□□□□□ -1.09
LSM1P2-201ENST00000604911 BNIP3LO60238 219 aa8.22□□□□□ -1.09
LSM1P2-201ENST00000604911 TLR1Q15399 786 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms