RNA–Protein interactions for RNA: ENST00000601978.1

SUPT5H-220, Transcript of SPT5 homolog, DSIF elongation factor subunit, humanhuman

TSL 2

Gene SUPT5H, Length 538 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT5H-220ENST00000601978 CEP350Q5VT06 3117 aa18.52■□□□□ 0.56
SUPT5H-220ENST00000601978 ZNF526Q8TF50 670 aaPredicted RBP18.52■□□□□ 0.56
SUPT5H-220ENST00000601978 MMP10P09238 476 aa18.51■□□□□ 0.55
SUPT5H-220ENST00000601978 TGFB2P61812 414 aa18.51■□□□□ 0.55
SUPT5H-220ENST00000601978 CICQ96RK0 1608 aaPredicted RBP18.51■□□□□ 0.55
SUPT5H-220ENST00000601978 ERVV-2B6SEH9 535 aa18.5■□□□□ 0.55
SUPT5H-220ENST00000601978 KIF3CO14782 793 aa18.5■□□□□ 0.55
SUPT5H-220ENST00000601978 RC3H1Q5TC82 1133 aaKnown RBP18.5■□□□□ 0.55
SUPT5H-220ENST00000601978 NLGN1Q8N2Q7 840 aa18.5■□□□□ 0.55
SUPT5H-220ENST00000601978 KDRP35968 1356 aa18.5■□□□□ 0.55
SUPT5H-220ENST00000601978 ADRA2BP18089 450 aa18.49■□□□□ 0.55
SUPT5H-220ENST00000601978 EIF4A2Q14240 407 aaKnown RBP18.49■□□□□ 0.55
SUPT5H-220ENST00000601978 TRAPPC3LQ5T215 181 aa18.49■□□□□ 0.55
SUPT5H-220ENST00000601978 WWC3Q9ULE0 1092 aa18.49■□□□□ 0.55
SUPT5H-220ENST00000601978 RTCBQ9Y3I0 505 aaKnown RBP18.49■□□□□ 0.55
SUPT5H-220ENST00000601978 KIF13BQ9NQT8 1826 aa18.49■□□□□ 0.55
SUPT5H-220ENST00000601978 ZNF831Q5JPB2 1677 aa18.48■□□□□ 0.55
SUPT5H-220ENST00000601978 PXDNLA1KZ92 1463 aa18.48■□□□□ 0.55
SUPT5H-220ENST00000601978 SLC4A9Q96Q91 983 aa18.48■□□□□ 0.55
SUPT5H-220ENST00000601978 TIMELESSQ9UNS1 1208 aa18.48■□□□□ 0.55
SUPT5H-220ENST00000601978 HSP90AB1P08238 724 aaKnown RBP18.47■□□□□ 0.55
SUPT5H-220ENST00000601978 ARHGEF1Q92888 912 aaKnown RBP18.46■□□□□ 0.55
SUPT5H-220ENST00000601978 DCAF5Q96JK2 942 aa18.46■□□□□ 0.55
SUPT5H-220ENST00000601978 CNTNAP4Q9C0A0 1308 aa18.46■□□□□ 0.55
SUPT5H-220ENST00000601978 RPS6KA4O75676 772 aa18.45■□□□□ 0.54
SUPT5H-220ENST00000601978 C10orf71Q711Q0 1435 aa18.45■□□□□ 0.54
SUPT5H-220ENST00000601978 KIAA1551Q9HCM1 1747 aa18.44■□□□□ 0.54
SUPT5H-220ENST00000601978 A0A0G2JLW4 131 aa18.43■□□□□ 0.54
SUPT5H-220ENST00000601978 GYS1P13807 737 aa18.43■□□□□ 0.54
SUPT5H-220ENST00000601978 PLEKHO1Q53GL0 409 aaPredicted RBP18.43■□□□□ 0.54
SUPT5H-220ENST00000601978 RBM42Q9BTD8 480 aaKnown RBP18.43■□□□□ 0.54
SUPT5H-220ENST00000601978 CCDC87Q9NVE4 849 aa18.43■□□□□ 0.54
SUPT5H-220ENST00000601978 BCS1LQ9Y276 419 aa18.43■□□□□ 0.54
SUPT5H-220ENST00000601978 RFC4P35249 363 aa18.42■□□□□ 0.54
SUPT5H-220ENST00000601978 AMOTQ4VCS5 1084 aa18.42■□□□□ 0.54
SUPT5H-220ENST00000601978 TOMM70O94826 608 aa18.41■□□□□ 0.54
SUPT5H-220ENST00000601978 TNNT2P45379 298 aaPredicted RBP18.41■□□□□ 0.54
SUPT5H-220ENST00000601978 APLP1P51693 650 aa18.41■□□□□ 0.54
SUPT5H-220ENST00000601978 N4BP2Q86UW6 1770 aaPredicted RBP18.4■□□□□ 0.54
SUPT5H-220ENST00000601978 DPEP1P16444 411 aa18.4■□□□□ 0.54
SUPT5H-220ENST00000601978 ARHGAP27Q6ZUM4 889 aa18.4■□□□□ 0.54
SUPT5H-220ENST00000601978 PARP3Q9Y6F1 533 aa18.4■□□□□ 0.54
SUPT5H-220ENST00000601978 COL5A3P25940 1745 aaPredicted RBP18.4■□□□□ 0.54
SUPT5H-220ENST00000601978 KDM6AO15550 1401 aaPredicted RBP18.4■□□□□ 0.54
SUPT5H-220ENST00000601978 KCNA3P22001 575 aa18.39■□□□□ 0.53
SUPT5H-220ENST00000601978 CABP4P57796 275 aa18.39■□□□□ 0.53
SUPT5H-220ENST00000601978 ZNF530Q6P9A1 599 aaPredicted RBP18.39■□□□□ 0.53
SUPT5H-220ENST00000601978 C4AP0C0L4 1744 aa18.39■□□□□ 0.53
SUPT5H-220ENST00000601978 MYH14Q7Z406 1995 aaKnown RBP18.39■□□□□ 0.53
SUPT5H-220ENST00000601978 FCHSD2O94868 740 aa18.38■□□□□ 0.53
SUPT5H-220ENST00000601978 BRCA1P38398 1863 aaKnown RBP18.37■□□□□ 0.53
SUPT5H-220ENST00000601978 MTHFSP49914 203 aa18.37■□□□□ 0.53
SUPT5H-220ENST00000601978 DNAJC5GQ8N7S2 189 aa18.37■□□□□ 0.53
SUPT5H-220ENST00000601978 CRKLP46109 303 aaKnown RBP18.36■□□□□ 0.53
SUPT5H-220ENST00000601978 CLSPNQ9HAW4 1339 aa18.35■□□□□ 0.53
SUPT5H-220ENST00000601978 PTCD1O75127 700 aaKnown RBP18.35■□□□□ 0.53
SUPT5H-220ENST00000601978 C1orf141Q5JVX7 400 aa18.35■□□□□ 0.53
SUPT5H-220ENST00000601978 POLR3GLQ9BT43 218 aa18.35■□□□□ 0.53
SUPT5H-220ENST00000601978 PANK3Q9H999 370 aa18.35■□□□□ 0.53
SUPT5H-220ENST00000601978 PIM2Q9P1W9 311 aa18.35■□□□□ 0.53
SUPT5H-220ENST00000601978 USP42Q9H9J4 1324 aaKnown RBP18.34■□□□□ 0.53
SUPT5H-220ENST00000601978 NFATC2IPQ8NCF5 419 aa18.34■□□□□ 0.53
SUPT5H-220ENST00000601978 RBM46Q8TBY0 533 aaKnown RBP18.34■□□□□ 0.53
SUPT5H-220ENST00000601978 NMRK2Q9NPI5 230 aa18.34■□□□□ 0.53
SUPT5H-220ENST00000601978 ARFGEF1Q9Y6D6 1849 aa18.33■□□□□ 0.53
SUPT5H-220ENST00000601978 FKBP8Q14318 412 aa18.33■□□□□ 0.52
SUPT5H-220ENST00000601978 C9orf131Q5VYM1 1079 aa18.33■□□□□ 0.52
SUPT5H-220ENST00000601978 AEBP1Q8IUX7 1158 aa18.33■□□□□ 0.52
SUPT5H-220ENST00000601978 DDR1Q08345 913 aa18.32■□□□□ 0.52
SUPT5H-220ENST00000601978 DALRD3Q5D0E6 543 aaKnown RBP18.32■□□□□ 0.52
SUPT5H-220ENST00000601978 SRP68Q9UHB9 627 aaKnown RBP18.32■□□□□ 0.52
SUPT5H-220ENST00000601978 TM4SF1P30408 202 aa18.31■□□□□ 0.52
SUPT5H-220ENST00000601978 INTS5Q6P9B9 1019 aaKnown RBP18.31■□□□□ 0.52
SUPT5H-220ENST00000601978 EIF4G2P78344 907 aaKnown RBP eCLIP18.3■□□□□ 0.52
SUPT5H-220ENST00000601978 SULT6B1Q6IMI4 303 aa18.3■□□□□ 0.52
SUPT5H-220ENST00000601978 MORC1Q86VD1 984 aa18.3■□□□□ 0.52
SUPT5H-220ENST00000601978 POLRMTO00411 1230 aaKnown RBP18.29■□□□□ 0.52
SUPT5H-220ENST00000601978 FSTL1Q12841 308 aa18.29■□□□□ 0.52
SUPT5H-220ENST00000601978 KDM2BQ8NHM5 1336 aa18.28■□□□□ 0.52
SUPT5H-220ENST00000601978 IL13P35225 146 aa18.28■□□□□ 0.52
SUPT5H-220ENST00000601978 TJP1Q07157 1748 aa18.28■□□□□ 0.52
SUPT5H-220ENST00000601978 HSPA5P11021 654 aaKnown RBP18.27■□□□□ 0.52
SUPT5H-220ENST00000601978 AKAP4Q5JQC9 854 aa18.27■□□□□ 0.52
SUPT5H-220ENST00000601978 C16orf71Q8IYS4 520 aaPredicted RBP18.27■□□□□ 0.52
SUPT5H-220ENST00000601978 ADAMTS7Q9UKP4 1686 aa18.27■□□□□ 0.52
SUPT5H-220ENST00000601978 SOS1Q07889 1333 aaPredicted RBP18.26■□□□□ 0.51
SUPT5H-220ENST00000601978 ZPR1O75312 459 aa18.26■□□□□ 0.51
SUPT5H-220ENST00000601978 CHRNA5P30532 468 aa18.26■□□□□ 0.51
SUPT5H-220ENST00000601978 SLC52A2Q9HAB3 445 aa18.26■□□□□ 0.51
SUPT5H-220ENST00000601978 RNF181Q9P0P0 153 aa18.26■□□□□ 0.51
SUPT5H-220ENST00000601978 SCN11AQ9UI33 1791 aa18.26■□□□□ 0.51
SUPT5H-220ENST00000601978 DNAJC10Q8IXB1 793 aa18.25■□□□□ 0.51
SUPT5H-220ENST00000601978 KCPQ6ZWJ8 1503 aa18.24■□□□□ 0.51
SUPT5H-220ENST00000601978 CYP19A1P11511 503 aaPredicted RBP18.24■□□□□ 0.51
SUPT5H-220ENST00000601978 USPL1Q5W0Q7 1092 aa18.24■□□□□ 0.51
SUPT5H-220ENST00000601978 JMYQ8N9B5 988 aa18.24■□□□□ 0.51
SUPT5H-220ENST00000601978 KLRG1Q96E93 195 aa18.24■□□□□ 0.51
SUPT5H-220ENST00000601978 KNSTRNQ9Y448 316 aa18.24■□□□□ 0.51
SUPT5H-220ENST00000601978 SBF1O95248 1867 aa18.24■□□□□ 0.51
SUPT5H-220ENST00000601978 ZC3H4Q9UPT8 1303 aaKnown RBP18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms