RNA–Protein interactions for RNA: ENST00000601729.1

AC006539.2-201, humanhuman

BASIC

Gene AC006539.2, Length 572 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC006539.2-201ENST00000601729 USP17L22D6RA61 530 aa8.25□□□□□ -1.09
AC006539.2-201ENST00000601729 USP17L17D6RBQ6 530 aa8.25□□□□□ -1.09
AC006539.2-201ENST00000601729 USP17L19D6RCP7 530 aa8.25□□□□□ -1.09
AC006539.2-201ENST00000601729 USP17L20D6RJB6 530 aa8.25□□□□□ -1.09
AC006539.2-201ENST00000601729 RASA1P20936 1047 aa8.25□□□□□ -1.09
AC006539.2-201ENST00000601729 CENPCQ03188 943 aa8.25□□□□□ -1.09
AC006539.2-201ENST00000601729 USP17L24Q0WX57 530 aa8.25□□□□□ -1.09
AC006539.2-201ENST00000601729 CCDC102BQ68D86 513 aa8.25□□□□□ -1.09
AC006539.2-201ENST00000601729 EPHA4P54764 986 aa8.24□□□□□ -1.09
AC006539.2-201ENST00000601729 PPARGC1BQ86YN6 1023 aaKnown RBP8.24□□□□□ -1.09
AC006539.2-201ENST00000601729 NPAS3Q8IXF0 933 aa8.24□□□□□ -1.09
AC006539.2-201ENST00000601729 POLMQ9NP87 494 aaPredicted RBP8.24□□□□□ -1.09
AC006539.2-201ENST00000601729 DNMT3LQ9UJW3 386 aa8.24□□□□□ -1.09
AC006539.2-201ENST00000601729 KIAA1024Q9UPX6 916 aa8.24□□□□□ -1.09
AC006539.2-201ENST00000601729 MEN1O00255 615 aa8.23□□□□□ -1.09
AC006539.2-201ENST00000601729 CDK2AP1O14519 115 aa8.23□□□□□ -1.09
AC006539.2-201ENST00000601729 SNRPBP14678 240 aaKnown RBP8.23□□□□□ -1.09
AC006539.2-201ENST00000601729 SMTNP53814 917 aa8.23□□□□□ -1.09
AC006539.2-201ENST00000601729 CRTC2Q53ET0 693 aaPredicted RBP8.23□□□□□ -1.09
AC006539.2-201ENST00000601729 ZNF787Q6DD87 383 aa8.23□□□□□ -1.09
AC006539.2-201ENST00000601729 ANKMY2Q8IV38 441 aa8.23□□□□□ -1.09
AC006539.2-201ENST00000601729 NBPF15Q8N660 670 aa8.23□□□□□ -1.09
AC006539.2-201ENST00000601729 TPCN2Q8NHX9 752 aa8.23□□□□□ -1.09
AC006539.2-201ENST00000601729 ARXQ96QS3 562 aa8.23□□□□□ -1.09
AC006539.2-201ENST00000601729 ZNF358Q9NW07 568 aa8.23□□□□□ -1.09
AC006539.2-201ENST00000601729 POTECB2RU33 542 aa8.22□□□□□ -1.09
AC006539.2-201ENST00000601729 MAN1A2O60476 641 aa8.22□□□□□ -1.09
AC006539.2-201ENST00000601729 SEC13P55735 322 aa8.22□□□□□ -1.09
AC006539.2-201ENST00000601729 FOXK2Q01167 660 aa8.22□□□□□ -1.09
AC006539.2-201ENST00000601729 PSME1Q06323 249 aa8.22□□□□□ -1.09
AC006539.2-201ENST00000601729 LYSMD3Q7Z3D4 306 aa8.22□□□□□ -1.09
AC006539.2-201ENST00000601729 RAB6BQ9NRW1 208 aa8.22□□□□□ -1.09
AC006539.2-201ENST00000601729 RBM19Q9Y4C8 960 aaKnown RBP8.22□□□□□ -1.09
AC006539.2-201ENST00000601729 A6NJY4 79 aa8.21□□□□□ -1.1
AC006539.2-201ENST00000601729 SUPT5HO00267 1087 aaKnown RBP8.21□□□□□ -1.1
AC006539.2-201ENST00000601729 POTEAQ6S8J7 498 aa8.21□□□□□ -1.1
AC006539.2-201ENST00000601729 ZNF295-AS1Q8N0V1 137 aa8.21□□□□□ -1.1
AC006539.2-201ENST00000601729 GAS2L2Q8NHY3 880 aa8.21□□□□□ -1.1
AC006539.2-201ENST00000601729 SCHIP1Q9P0W5 487 aaPredicted RBP8.21□□□□□ -1.1
AC006539.2-201ENST00000601729 IQSEC3Q9UPP2 1182 aaPredicted RBP8.21□□□□□ -1.1
AC006539.2-201ENST00000601729 TLR1Q15399 786 aa8.2□□□□□ -1.1
AC006539.2-201ENST00000601729 SWI5Q1ZZU3 235 aa8.2□□□□□ -1.1
AC006539.2-201ENST00000601729 SLC27A3Q5K4L6 730 aa8.2□□□□□ -1.1
AC006539.2-201ENST00000601729 STAG2Q8N3U4 1231 aa8.2□□□□□ -1.1
AC006539.2-201ENST00000601729 RHBDD1Q8TEB9 315 aa8.2□□□□□ -1.1
AC006539.2-201ENST00000601729 ZSCAN10Q96SZ4 725 aaPredicted RBP8.2□□□□□ -1.1
AC006539.2-201ENST00000601729 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.19□□□□□ -1.1
AC006539.2-201ENST00000601729 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.19□□□□□ -1.1
AC006539.2-201ENST00000601729 ZNF594Q96JF6 807 aaPredicted RBP8.19□□□□□ -1.1
AC006539.2-201ENST00000601729 SLC35F4A4IF30 521 aa8.18□□□□□ -1.1
AC006539.2-201ENST00000601729 RFX1P22670 979 aa8.18□□□□□ -1.1
AC006539.2-201ENST00000601729 GTF2E1P29083 439 aaPredicted RBP8.18□□□□□ -1.1
AC006539.2-201ENST00000601729 HIRAP54198 1017 aaPredicted RBP8.18□□□□□ -1.1
AC006539.2-201ENST00000601729 DPYDQ12882 1025 aa8.18□□□□□ -1.1
AC006539.2-201ENST00000601729 GNASQ5JWF2 1037 aa8.18□□□□□ -1.1
AC006539.2-201ENST00000601729 NBPF10Q6P3W6 841 aaKnown RBP8.18□□□□□ -1.1
AC006539.2-201ENST00000601729 TAS1R3Q7RTX0 852 aa8.18□□□□□ -1.1
AC006539.2-201ENST00000601729 ZMIZ1Q9ULJ6 1067 aa8.18□□□□□ -1.1
AC006539.2-201ENST00000601729 NOVA2Q9UNW9 492 aaKnown RBP8.18□□□□□ -1.1
AC006539.2-201ENST00000601729 ACIN1Q9UKV3 1341 aaKnown RBP8.18□□□□□ -1.1
AC006539.2-201ENST00000601729 STAU1O95793 577 aaKnown RBP8.17□□□□□ -1.1
AC006539.2-201ENST00000601729 FAM200AQ8TCP9 573 aa8.17□□□□□ -1.1
AC006539.2-201ENST00000601729 GMCL1Q96IK5 515 aa8.17□□□□□ -1.1
AC006539.2-201ENST00000601729 NIFKQ9BYG3 293 aaKnown RBP8.17□□□□□ -1.1
AC006539.2-201ENST00000601729 DYRK1BQ9Y463 629 aa8.17□□□□□ -1.1
AC006539.2-201ENST00000601729 SENP3-EIF4A1A0A087X0R7 540 aa8.16□□□□□ -1.1
AC006539.2-201ENST00000601729 PTSQ03393 145 aa8.16□□□□□ -1.1
AC006539.2-201ENST00000601729 TEAD4Q15561 434 aa8.16□□□□□ -1.1
AC006539.2-201ENST00000601729 TMEM214Q6NUQ4 689 aaKnown RBP8.16□□□□□ -1.1
AC006539.2-201ENST00000601729 C1orf216Q8TAB5 229 aa8.16□□□□□ -1.1
AC006539.2-201ENST00000601729 FIGNL2A6NMB9 653 aa8.15□□□□□ -1.1
AC006539.2-201ENST00000601729 FAM69CQ0P6D2 419 aa8.15□□□□□ -1.1
AC006539.2-201ENST00000601729 NXF1Q9UBU9 619 aaKnown RBP8.15□□□□□ -1.1
AC006539.2-201ENST00000601729 SERTAD1Q9UHV2 236 aa8.15□□□□□ -1.1
AC006539.2-201ENST00000601729 A0A1B0GTH6 734 aa8.14□□□□□ -1.11
AC006539.2-201ENST00000601729 SFI1A8K8P3 1242 aa8.14□□□□□ -1.11
AC006539.2-201ENST00000601729 VSIG8P0DPA2 414 aa8.14□□□□□ -1.11
AC006539.2-201ENST00000601729 IGFBP4P22692 258 aa8.14□□□□□ -1.11
AC006539.2-201ENST00000601729 LBRQ14739 615 aaKnown RBP8.14□□□□□ -1.11
AC006539.2-201ENST00000601729 C4orf17Q53FE4 359 aa8.14□□□□□ -1.11
AC006539.2-201ENST00000601729 PRICKLE2Q7Z3G6 844 aa8.14□□□□□ -1.11
AC006539.2-201ENST00000601729 NANOS1Q8WY41 292 aaKnown RBP8.14□□□□□ -1.11
AC006539.2-201ENST00000601729 ZDHHC3Q9NYG2 299 aa8.14□□□□□ -1.11
AC006539.2-201ENST00000601729 GPC6Q9Y625 555 aaPredicted RBP8.14□□□□□ -1.11
AC006539.2-201ENST00000601729 WEE1P30291 646 aa8.13□□□□□ -1.11
AC006539.2-201ENST00000601729 PSMA6P60900 246 aaKnown RBP8.13□□□□□ -1.11
AC006539.2-201ENST00000601729 POU4F2Q12837 409 aa8.13□□□□□ -1.11
AC006539.2-201ENST00000601729 SLC9A9Q8IVB4 645 aa8.13□□□□□ -1.11
AC006539.2-201ENST00000601729 TNS4Q8IZW8 715 aa8.13□□□□□ -1.11
AC006539.2-201ENST00000601729 TSEN2Q8NCE0 465 aaKnown RBP8.13□□□□□ -1.11
AC006539.2-201ENST00000601729 USTQ9Y2C2 406 aa8.13□□□□□ -1.11
AC006539.2-201ENST00000601729 SOBPA7XYQ1 873 aa8.12□□□□□ -1.11
AC006539.2-201ENST00000601729 H3BM21 787 aa8.12□□□□□ -1.11
AC006539.2-201ENST00000601729 PDE4CQ08493 712 aa8.12□□□□□ -1.11
AC006539.2-201ENST00000601729 CCDC155Q8N6L0 562 aa8.12□□□□□ -1.11
AC006539.2-201ENST00000601729 CLP1Q92989 425 aaKnown RBP8.12□□□□□ -1.11
AC006539.2-201ENST00000601729 TERTO14746 1132 aaKnown RBP8.11□□□□□ -1.11
AC006539.2-201ENST00000601729 FOXO3O43524 673 aa8.11□□□□□ -1.11
AC006539.2-201ENST00000601729 C21orf2O43822 256 aa8.11□□□□□ -1.11
AC006539.2-201ENST00000601729 PPFIA3O75145 1194 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms