RNA–Protein interactions for RNA: ENST00000596315.5

EMP3-204, Transcript of epithelial membrane protein 3, humanhuman

TSL 2 BASIC

Gene EMP3, Length 761 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EMP3-204ENST00000596315 SCN11AQ9UI33 1791 aa17.28■□□□□ 0.36
EMP3-204ENST00000596315 TJP1Q07157 1748 aa17.28■□□□□ 0.36
EMP3-204ENST00000596315 SENP3-EIF4A1A0A087X0R7 540 aa17.28■□□□□ 0.36
EMP3-204ENST00000596315 C1QTNF8P60827 252 aa17.28■□□□□ 0.36
EMP3-204ENST00000596315 IGSF1Q8N6C5 1336 aa17.27■□□□□ 0.36
EMP3-204ENST00000596315 CICQ96RK0 1608 aaPredicted RBP17.27■□□□□ 0.36
EMP3-204ENST00000596315 GNPATO15228 680 aa17.26■□□□□ 0.35
EMP3-204ENST00000596315 IFNL2Q8IZJ0 200 aa17.26■□□□□ 0.35
EMP3-204ENST00000596315 FLAD1Q8NFF5 587 aa17.26■□□□□ 0.35
EMP3-204ENST00000596315 ATG3Q9NT62 314 aa17.26■□□□□ 0.35
EMP3-204ENST00000596315 ATP10DQ9P241 1426 aa17.26■□□□□ 0.35
EMP3-204ENST00000596315 BRCA1P38398 1863 aaKnown RBP17.26■□□□□ 0.35
EMP3-204ENST00000596315 AEBP1Q8IUX7 1158 aa17.25■□□□□ 0.35
EMP3-204ENST00000596315 PANK3Q9H999 370 aa17.25■□□□□ 0.35
EMP3-204ENST00000596315 GIGYF1O75420 1035 aaPredicted RBP17.24■□□□□ 0.35
EMP3-204ENST00000596315 ATP6V1AP38606 617 aa17.24■□□□□ 0.35
EMP3-204ENST00000596315 SLC4A9Q96Q91 983 aa17.24■□□□□ 0.35
EMP3-204ENST00000596315 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.24■□□□□ 0.35
EMP3-204ENST00000596315 CD2APQ9Y5K6 639 aa17.24■□□□□ 0.35
EMP3-204ENST00000596315 SSFA2P28290 1259 aa17.23■□□□□ 0.35
EMP3-204ENST00000596315 ADCY9O60503 1353 aa17.22■□□□□ 0.35
EMP3-204ENST00000596315 PXDNLA1KZ92 1463 aa17.21■□□□□ 0.35
EMP3-204ENST00000596315 GRIN3BO60391 1043 aa17.21■□□□□ 0.35
EMP3-204ENST00000596315 ZNF530Q6P9A1 599 aaPredicted RBP17.21■□□□□ 0.35
EMP3-204ENST00000596315 ADAMTS7Q9UKP4 1686 aa17.2■□□□□ 0.34
EMP3-204ENST00000596315 RBM42Q9BTD8 480 aaKnown RBP17.2■□□□□ 0.34
EMP3-204ENST00000596315 PLEKHG2Q9H7P9 1386 aa17.19■□□□□ 0.34
EMP3-204ENST00000596315 MMP10P09238 476 aa17.18■□□□□ 0.34
EMP3-204ENST00000596315 ZNF526Q8TF50 670 aaPredicted RBP17.18■□□□□ 0.34
EMP3-204ENST00000596315 C10orf71Q711Q0 1435 aa17.18■□□□□ 0.34
EMP3-204ENST00000596315 MORC1Q86VD1 984 aa17.17■□□□□ 0.34
EMP3-204ENST00000596315 ARFGEF1Q9Y6D6 1849 aa17.17■□□□□ 0.34
EMP3-204ENST00000596315 PLEKHO1Q53GL0 409 aaPredicted RBP17.16■□□□□ 0.34
EMP3-204ENST00000596315 DCAF5Q96JK2 942 aa17.16■□□□□ 0.34
EMP3-204ENST00000596315 ERVV-2B6SEH9 535 aa17.15■□□□□ 0.34
EMP3-204ENST00000596315 CNTNAP4Q9C0A0 1308 aa17.15■□□□□ 0.34
EMP3-204ENST00000596315 AFDNP55196 1824 aaKnown RBP17.14■□□□□ 0.34
EMP3-204ENST00000596315 CABP4P57796 275 aa17.14■□□□□ 0.33
EMP3-204ENST00000596315 SULT6B1Q6IMI4 303 aa17.14■□□□□ 0.33
EMP3-204ENST00000596315 RTCBQ9Y3I0 505 aaKnown RBP17.14■□□□□ 0.33
EMP3-204ENST00000596315 MRC1P22897 1456 aa17.13■□□□□ 0.33
EMP3-204ENST00000596315 UBR2Q8IWV8 1755 aa17.13■□□□□ 0.33
EMP3-204ENST00000596315 PTCD1O75127 700 aaKnown RBP17.13■□□□□ 0.33
EMP3-204ENST00000596315 HMGB2P26583 209 aaKnown RBP17.13■□□□□ 0.33
EMP3-204ENST00000596315 ARHGEF1Q92888 912 aaKnown RBP17.13■□□□□ 0.33
EMP3-204ENST00000596315 HSP90AB1P08238 724 aaKnown RBP17.12■□□□□ 0.33
EMP3-204ENST00000596315 GYS1P13807 737 aa17.12■□□□□ 0.33
EMP3-204ENST00000596315 IL13P35225 146 aa17.12■□□□□ 0.33
EMP3-204ENST00000596315 SRP68Q9UHB9 627 aaKnown RBP17.12■□□□□ 0.33
EMP3-204ENST00000596315 KIF7Q2M1P5 1343 aa17.12■□□□□ 0.33
EMP3-204ENST00000596315 MTHFSP49914 203 aa17.11■□□□□ 0.33
EMP3-204ENST00000596315 AMER1Q5JTC6 1135 aaPredicted RBP17.11■□□□□ 0.33
EMP3-204ENST00000596315 C1orf141Q5JVX7 400 aa17.11■□□□□ 0.33
EMP3-204ENST00000596315 TRAPPC3LQ5T215 181 aa17.11■□□□□ 0.33
EMP3-204ENST00000596315 GPBP1L1Q9HC44 474 aaPredicted RBP17.11■□□□□ 0.33
EMP3-204ENST00000596315 KNSTRNQ9Y448 316 aa17.11■□□□□ 0.33
EMP3-204ENST00000596315 KCPQ6ZWJ8 1503 aa17.11■□□□□ 0.33
EMP3-204ENST00000596315 A0A0G2JLW4 131 aa17.1■□□□□ 0.33
EMP3-204ENST00000596315 ZEB1P37275 1124 aaPredicted RBP17.1■□□□□ 0.33
EMP3-204ENST00000596315 CRKLP46109 303 aaKnown RBP17.1■□□□□ 0.33
EMP3-204ENST00000596315 AMOTQ4VCS5 1084 aa17.1■□□□□ 0.33
EMP3-204ENST00000596315 NFATC2IPQ8NCF5 419 aa17.1■□□□□ 0.33
EMP3-204ENST00000596315 RPS6KA4O75676 772 aa17.09■□□□□ 0.33
EMP3-204ENST00000596315 RC3H1Q5TC82 1133 aaKnown RBP17.09■□□□□ 0.33
EMP3-204ENST00000596315 SIPA1L3O60292 1781 aaPredicted RBP17.09■□□□□ 0.33
EMP3-204ENST00000596315 SBF1O95248 1867 aa17.09■□□□□ 0.33
EMP3-204ENST00000596315 COL3A1P02461 1466 aaPredicted RBP17.08■□□□□ 0.32
EMP3-204ENST00000596315 HMOX1P09601 288 aa17.08■□□□□ 0.32
EMP3-204ENST00000596315 RFC4P35249 363 aa17.08■□□□□ 0.32
EMP3-204ENST00000596315 BCS1LQ9Y276 419 aa17.08■□□□□ 0.32
EMP3-204ENST00000596315 DPEP1P16444 411 aa17.07■□□□□ 0.32
EMP3-204ENST00000596315 ADRA2BP18089 450 aa17.07■□□□□ 0.32
EMP3-204ENST00000596315 DLEC1Q9Y238 1755 aa17.07■□□□□ 0.32
EMP3-204ENST00000596315 USP42Q9H9J4 1324 aaKnown RBP17.06■□□□□ 0.32
EMP3-204ENST00000596315 DDR1Q08345 913 aa17.06■□□□□ 0.32
EMP3-204ENST00000596315 LGR6Q9HBX8 967 aa17.06■□□□□ 0.32
EMP3-204ENST00000596315 NRXN2Q9P2S2 1712 aa17.06■□□□□ 0.32
EMP3-204ENST00000596315 SLC39A6Q13433 755 aa17.05■□□□□ 0.32
EMP3-204ENST00000596315 CNGB1Q14028 1251 aaPredicted RBP17.05■□□□□ 0.32
EMP3-204ENST00000596315 FKBP8Q14318 412 aa17.05■□□□□ 0.32
EMP3-204ENST00000596315 CC2D1BQ5T0F9 858 aaKnown RBP17.05■□□□□ 0.32
EMP3-204ENST00000596315 DNAJC10Q8IXB1 793 aa17.05■□□□□ 0.32
EMP3-204ENST00000596315 NLGN1Q8N2Q7 840 aa17.05■□□□□ 0.32
EMP3-204ENST00000596315 CCDC87Q9NVE4 849 aa17.05■□□□□ 0.32
EMP3-204ENST00000596315 CCDC88AQ3V6T2 1871 aa17.05■□□□□ 0.32
EMP3-204ENST00000596315 PARP3Q9Y6F1 533 aa17.04■□□□□ 0.32
EMP3-204ENST00000596315 SCN7AQ01118 1682 aa17.04■□□□□ 0.32
EMP3-204ENST00000596315 KIF3CO14782 793 aa17.03■□□□□ 0.32
EMP3-204ENST00000596315 AKAP4Q5JQC9 854 aa17.03■□□□□ 0.32
EMP3-204ENST00000596315 INTS5Q6P9B9 1019 aaKnown RBP17.03■□□□□ 0.32
EMP3-204ENST00000596315 SLC52A2Q9HAB3 445 aa17.03■□□□□ 0.32
EMP3-204ENST00000596315 CACNA1SQ13698 1873 aa17.03■□□□□ 0.32
EMP3-204ENST00000596315 ANKRD31Q8N7Z5 1873 aa17.03■□□□□ 0.32
EMP3-204ENST00000596315 RNMTO43148 476 aaKnown RBP17.02■□□□□ 0.32
EMP3-204ENST00000596315 FCHSD2O94868 740 aa17.02■□□□□ 0.32
EMP3-204ENST00000596315 KCNA3P22001 575 aa17.02■□□□□ 0.32
EMP3-204ENST00000596315 TGFB2P61812 414 aa17.02■□□□□ 0.32
EMP3-204ENST00000596315 COL11A2P13942 1736 aaPredicted RBP17.01■□□□□ 0.31
EMP3-204ENST00000596315 SOS1Q07889 1333 aaPredicted RBP17.01■□□□□ 0.31
EMP3-204ENST00000596315 CHRNA5P30532 468 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms