RNA–Protein interactions for RNA: ENST00000596014.5

PNKP-207, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-207ENST00000596014 MCM10Q7L590 875 aa25.48■■□□□ 1.67
PNKP-207ENST00000596014 RRP7AQ9Y3A4 280 aaKnown RBP25.48■■□□□ 1.67
PNKP-207ENST00000596014 MRC1P22897 1456 aa25.47■■□□□ 1.67
PNKP-207ENST00000596014 DCTN1Q14203 1278 aa25.47■■□□□ 1.67
PNKP-207ENST00000596014 APAF1O14727 1248 aa25.46■■□□□ 1.67
PNKP-207ENST00000596014 NEUROD2Q15784 382 aa25.46■■□□□ 1.67
PNKP-207ENST00000596014 PROM2Q8N271 834 aa25.46■■□□□ 1.67
PNKP-207ENST00000596014 TEFQ10587 303 aa25.45■■□□□ 1.67
PNKP-207ENST00000596014 ASAP1Q9ULH1 1129 aa25.45■■□□□ 1.67
PNKP-207ENST00000596014 SMARCC1Q92922 1105 aaPredicted RBP25.45■■□□□ 1.66
PNKP-207ENST00000596014 ATG3Q9NT62 314 aa25.45■■□□□ 1.66
PNKP-207ENST00000596014 TXNRD1Q16881 649 aa25.44■■□□□ 1.66
PNKP-207ENST00000596014 LY75O60449 1722 aa25.44■■□□□ 1.66
PNKP-207ENST00000596014 SIPA1L3O60292 1781 aaPredicted RBP25.43■■□□□ 1.66
PNKP-207ENST00000596014 PALLDQ8WX93 1383 aa25.42■■□□□ 1.66
PNKP-207ENST00000596014 RREB1Q92766 1687 aa25.41■■□□□ 1.66
PNKP-207ENST00000596014 LMOD3Q0VAK6 560 aa25.41■■□□□ 1.66
PNKP-207ENST00000596014 THUMPD2Q9BTF0 503 aaKnown RBP25.4■■□□□ 1.66
PNKP-207ENST00000596014 TRIM35Q9UPQ4 493 aa25.4■■□□□ 1.66
PNKP-207ENST00000596014 SLC27A3Q5K4L6 730 aa25.39■■□□□ 1.65
PNKP-207ENST00000596014 LRRC4BQ9NT99 713 aa25.38■■□□□ 1.65
PNKP-207ENST00000596014 NUP188Q5SRE5 1749 aa25.37■■□□□ 1.65
PNKP-207ENST00000596014 SLC39A6Q13433 755 aa25.37■■□□□ 1.65
PNKP-207ENST00000596014 CCNL1Q9UK58 526 aaPredicted RBP25.37■■□□□ 1.65
PNKP-207ENST00000596014 PAPPAQ13219 1627 aa25.37■■□□□ 1.65
PNKP-207ENST00000596014 SENP3-EIF4A1A0A087X0R7 540 aa25.36■■□□□ 1.65
PNKP-207ENST00000596014 KCNQ4P56696 695 aa25.36■■□□□ 1.65
PNKP-207ENST00000596014 TAF7Q15545 349 aaPredicted RBP25.36■■□□□ 1.65
PNKP-207ENST00000596014 LOC102724428A0A0B4J2F2 783 aa25.36■■□□□ 1.65
PNKP-207ENST00000596014 BTBD11A6QL63 1104 aa25.36■■□□□ 1.65
PNKP-207ENST00000596014 SIK1P57059 783 aa25.36■■□□□ 1.65
PNKP-207ENST00000596014 PTCD1O75127 700 aaKnown RBP25.34■■□□□ 1.65
PNKP-207ENST00000596014 RBM42Q9BTD8 480 aaKnown RBP25.34■■□□□ 1.65
PNKP-207ENST00000596014 ZNF790Q6PG37 636 aa25.33■■□□□ 1.65
PNKP-207ENST00000596014 TTC5Q8N0Z6 440 aa25.32■■□□□ 1.64
PNKP-207ENST00000596014 SLC4A9Q96Q91 983 aa25.32■■□□□ 1.64
PNKP-207ENST00000596014 MIS18AQ9NYP9 233 aa25.32■■□□□ 1.64
PNKP-207ENST00000596014 UBR2Q8IWV8 1755 aa25.32■■□□□ 1.64
PNKP-207ENST00000596014 ATP6V1AP38606 617 aa25.31■■□□□ 1.64
PNKP-207ENST00000596014 NCBP3Q53F19 620 aaKnown RBP25.31■■□□□ 1.64
PNKP-207ENST00000596014 TAF1LQ8IZX4 1826 aa25.31■■□□□ 1.64
PNKP-207ENST00000596014 KCNQ3O43525 872 aa25.3■■□□□ 1.64
PNKP-207ENST00000596014 CCDC27Q2M243 656 aa25.3■■□□□ 1.64
PNKP-207ENST00000596014 ZNF831Q5JPB2 1677 aa25.3■■□□□ 1.64
PNKP-207ENST00000596014 KCPQ6ZWJ8 1503 aa25.29■■□□□ 1.64
PNKP-207ENST00000596014 NBPF14Q5TI25 921 aa25.29■■□□□ 1.64
PNKP-207ENST00000596014 C5P01031 1676 aa25.29■■□□□ 1.64
PNKP-207ENST00000596014 ITPK1Q13572 414 aa25.28■■□□□ 1.64
PNKP-207ENST00000596014 ZNF496Q96IT1 587 aaPredicted RBP25.28■■□□□ 1.64
PNKP-207ENST00000596014 SALL2Q9Y467 1007 aaPredicted RBP25.28■■□□□ 1.64
PNKP-207ENST00000596014 WWC1Q8IX03 1113 aa25.27■■□□□ 1.64
PNKP-207ENST00000596014 KDM3BQ7LBC6 1761 aa25.27■■□□□ 1.64
PNKP-207ENST00000596014 HMGB2P26583 209 aaKnown RBP25.26■■□□□ 1.63
PNKP-207ENST00000596014 ANO8Q9HCE9 1232 aaPredicted RBP25.26■■□□□ 1.63
PNKP-207ENST00000596014 BABAM1Q9NWV8 329 aa25.26■■□□□ 1.63
PNKP-207ENST00000596014 VSIG10Q8N0Z9 540 aa25.25■■□□□ 1.63
PNKP-207ENST00000596014 NGEFQ8N5V2 710 aa25.25■■□□□ 1.63
PNKP-207ENST00000596014 FMNL2Q96PY5 1086 aa25.25■■□□□ 1.63
PNKP-207ENST00000596014 CALD1Q05682 793 aaKnown RBP25.24■■□□□ 1.63
PNKP-207ENST00000596014 LINC00116Q8NCU8 138 aa25.24■■□□□ 1.63
PNKP-207ENST00000596014 STK32BQ9NY57 414 aa25.24■■□□□ 1.63
PNKP-207ENST00000596014 TSPYL4Q9UJ04 414 aa25.24■■□□□ 1.63
PNKP-207ENST00000596014 LAS1LQ9Y4W2 734 aaKnown RBP25.24■■□□□ 1.63
PNKP-207ENST00000596014 CHL1O00533 1208 aa25.23■■□□□ 1.63
PNKP-207ENST00000596014 TJP1Q07157 1748 aa25.23■■□□□ 1.63
PNKP-207ENST00000596014 SLC15A2Q16348 729 aa25.23■■□□□ 1.63
PNKP-207ENST00000596014 AKT1S1Q96B36 256 aa25.23■■□□□ 1.63
PNKP-207ENST00000596014 HEG1Q9ULI3 1381 aa25.23■■□□□ 1.63
PNKP-207ENST00000596014 ZNF827Q17R98 1081 aa25.23■■□□□ 1.63
PNKP-207ENST00000596014 CFAP44Q96MT7 982 aa25.23■■□□□ 1.63
PNKP-207ENST00000596014 COL5A3P25940 1745 aaPredicted RBP25.22■■□□□ 1.63
PNKP-207ENST00000596014 CICQ96RK0 1608 aaPredicted RBP25.22■■□□□ 1.63
PNKP-207ENST00000596014 DNAJC10Q8IXB1 793 aa25.22■■□□□ 1.63
PNKP-207ENST00000596014 C4BP0C0L5 1744 aa25.22■■□□□ 1.63
PNKP-207ENST00000596014 R3HDM1Q15032 1099 aaKnown RBP25.21■■□□□ 1.63
PNKP-207ENST00000596014 ZNF853P0CG23 659 aa25.2■■□□□ 1.63
PNKP-207ENST00000596014 EIF4A1P60842 406 aaKnown RBP25.2■■□□□ 1.62
PNKP-207ENST00000596014 IFT57Q9NWB7 429 aa25.2■■□□□ 1.62
PNKP-207ENST00000596014 PSDA5PKW4 1024 aaPredicted RBP25.19■■□□□ 1.62
PNKP-207ENST00000596014 GNAI1P63096 354 aa25.19■■□□□ 1.62
PNKP-207ENST00000596014 MYH14Q7Z406 1995 aaKnown RBP25.18■■□□□ 1.62
PNKP-207ENST00000596014 WDR63Q8IWG1 891 aa25.18■■□□□ 1.62
PNKP-207ENST00000596014 SNRPA1P09661 255 aaKnown RBP25.17■■□□□ 1.62
PNKP-207ENST00000596014 TEX13AQ9BXU3 409 aaPredicted RBP25.17■■□□□ 1.62
PNKP-207ENST00000596014 TFCP2L1Q9NZI6 479 aa25.17■■□□□ 1.62
PNKP-207ENST00000596014 CYP19A1P11511 503 aaPredicted RBP25.17■■□□□ 1.62
PNKP-207ENST00000596014 RC3H1Q5TC82 1133 aaKnown RBP25.17■■□□□ 1.62
PNKP-207ENST00000596014 AK7Q96M32 723 aa25.17■■□□□ 1.62
PNKP-207ENST00000596014 MBIPQ9NS73 344 aa25.17■■□□□ 1.62
PNKP-207ENST00000596014 CNTNAP4Q9C0A0 1308 aa25.16■■□□□ 1.62
PNKP-207ENST00000596014 TUBGCP6Q96RT7 1819 aa25.16■■□□□ 1.62
PNKP-207ENST00000596014 IL16Q14005 1332 aa25.15■■□□□ 1.62
PNKP-207ENST00000596014 PRAMEF22A3QJZ6 481 aa25.15■■□□□ 1.62
PNKP-207ENST00000596014 STARD3NLO95772 234 aa25.15■■□□□ 1.62
PNKP-207ENST00000596014 CRKLP46109 303 aaKnown RBP25.15■■□□□ 1.62
PNKP-207ENST00000596014 UBR3Q6ZT12 1888 aa25.15■■□□□ 1.62
PNKP-207ENST00000596014 GIGYF1O75420 1035 aaPredicted RBP25.14■■□□□ 1.62
PNKP-207ENST00000596014 USP16Q9Y5T5 823 aa25.14■■□□□ 1.62
PNKP-207ENST00000596014 ZNF521Q96K83 1311 aa25.14■■□□□ 1.61
PNKP-207ENST00000596014 INTS5Q6P9B9 1019 aaKnown RBP25.13■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 127 ms