RNA–Protein interactions for RNA: ENST00000595789.5

XRCC1-205, Transcript of X-ray repair cross complementing 1, humanhuman

TSL 3

Gene XRCC1, Length 1,147 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-205ENST00000595789 SLC4A9Q96Q91 983 aa20.42■□□□□ 0.86
XRCC1-205ENST00000595789 ERVV-2B6SEH9 535 aa20.41■□□□□ 0.86
XRCC1-205ENST00000595789 KDRP35968 1356 aa20.39■□□□□ 0.85
XRCC1-205ENST00000595789 GNPATO15228 680 aa20.39■□□□□ 0.85
XRCC1-205ENST00000595789 DCAF5Q96JK2 942 aa20.39■□□□□ 0.85
XRCC1-205ENST00000595789 PLEKHO1Q53GL0 409 aaPredicted RBP20.38■□□□□ 0.85
XRCC1-205ENST00000595789 MORC1Q86VD1 984 aa20.38■□□□□ 0.85
XRCC1-205ENST00000595789 HSP90AB1P08238 724 aaKnown RBP20.37■□□□□ 0.85
XRCC1-205ENST00000595789 AEBP1Q8IUX7 1158 aa20.37■□□□□ 0.85
XRCC1-205ENST00000595789 KDM6AO15550 1401 aaPredicted RBP20.36■□□□□ 0.85
XRCC1-205ENST00000595789 AMOTQ4VCS5 1084 aa20.36■□□□□ 0.85
XRCC1-205ENST00000595789 ZNF530Q6P9A1 599 aaPredicted RBP20.35■□□□□ 0.85
XRCC1-205ENST00000595789 CCER1Q8TC90 406 aaPredicted RBP20.35■□□□□ 0.85
XRCC1-205ENST00000595789 RC3H1Q5TC82 1133 aaKnown RBP20.34■□□□□ 0.85
XRCC1-205ENST00000595789 GIGYF1O75420 1035 aaPredicted RBP20.33■□□□□ 0.85
XRCC1-205ENST00000595789 IL13P35225 146 aa20.33■□□□□ 0.85
XRCC1-205ENST00000595789 CABP4P57796 275 aa20.33■□□□□ 0.85
XRCC1-205ENST00000595789 AMER1Q5JTC6 1135 aaPredicted RBP20.33■□□□□ 0.85
XRCC1-205ENST00000595789 TRAPPC3LQ5T215 181 aa20.33■□□□□ 0.85
XRCC1-205ENST00000595789 RBM42Q9BTD8 480 aaKnown RBP20.33■□□□□ 0.85
XRCC1-205ENST00000595789 KNSTRNQ9Y448 316 aa20.33■□□□□ 0.85
XRCC1-205ENST00000595789 RTCBQ9Y3I0 505 aaKnown RBP20.32■□□□□ 0.84
XRCC1-205ENST00000595789 SENP3-EIF4A1A0A087X0R7 540 aa20.31■□□□□ 0.84
XRCC1-205ENST00000595789 MMP10P09238 476 aa20.31■□□□□ 0.84
XRCC1-205ENST00000595789 MTHFSP49914 203 aa20.31■□□□□ 0.84
XRCC1-205ENST00000595789 SULT6B1Q6IMI4 303 aa20.31■□□□□ 0.84
XRCC1-205ENST00000595789 ARHGEF1Q92888 912 aaKnown RBP20.31■□□□□ 0.84
XRCC1-205ENST00000595789 ZNF831Q5JPB2 1677 aa20.31■□□□□ 0.84
XRCC1-205ENST00000595789 CNTNAP4Q9C0A0 1308 aa20.3■□□□□ 0.84
XRCC1-205ENST00000595789 ATP10DQ9P241 1426 aa20.3■□□□□ 0.84
XRCC1-205ENST00000595789 RPS6KA4O75676 772 aa20.3■□□□□ 0.84
XRCC1-205ENST00000595789 NFATC2IPQ8NCF5 419 aa20.3■□□□□ 0.84
XRCC1-205ENST00000595789 ADRA2BP18089 450 aa20.29■□□□□ 0.84
XRCC1-205ENST00000595789 NLGN1Q8N2Q7 840 aa20.29■□□□□ 0.84
XRCC1-205ENST00000595789 WWC3Q9ULE0 1092 aa20.29■□□□□ 0.84
XRCC1-205ENST00000595789 ADCY9O60503 1353 aa20.29■□□□□ 0.84
XRCC1-205ENST00000595789 GYS1P13807 737 aa20.28■□□□□ 0.84
XRCC1-205ENST00000595789 C1orf141Q5JVX7 400 aa20.28■□□□□ 0.84
XRCC1-205ENST00000595789 KIF7Q2M1P5 1343 aa20.27■□□□□ 0.84
XRCC1-205ENST00000595789 PER1O15534 1290 aaPredicted RBP20.27■□□□□ 0.84
XRCC1-205ENST00000595789 CEP350Q5VT06 3117 aa20.27■□□□□ 0.83
XRCC1-205ENST00000595789 PTCD1O75127 700 aaKnown RBP20.26■□□□□ 0.83
XRCC1-205ENST00000595789 MYH14Q7Z406 1995 aaKnown RBP20.26■□□□□ 0.83
XRCC1-205ENST00000595789 COL5A3P25940 1745 aaPredicted RBP20.25■□□□□ 0.83
XRCC1-205ENST00000595789 PXDNLA1KZ92 1463 aa20.24■□□□□ 0.83
XRCC1-205ENST00000595789 RFC4P35249 363 aa20.24■□□□□ 0.83
XRCC1-205ENST00000595789 TGFB2P61812 414 aa20.24■□□□□ 0.83
XRCC1-205ENST00000595789 CRKLP46109 303 aaKnown RBP20.23■□□□□ 0.83
XRCC1-205ENST00000595789 AKAP4Q5JQC9 854 aa20.23■□□□□ 0.83
XRCC1-205ENST00000595789 C10orf71Q711Q0 1435 aa20.23■□□□□ 0.83
XRCC1-205ENST00000595789 LGR6Q9HBX8 967 aa20.23■□□□□ 0.83
XRCC1-205ENST00000595789 GPBP1L1Q9HC44 474 aaPredicted RBP20.22■□□□□ 0.83
XRCC1-205ENST00000595789 CICQ96RK0 1608 aaPredicted RBP20.22■□□□□ 0.83
XRCC1-205ENST00000595789 KIAA1551Q9HCM1 1747 aa20.22■□□□□ 0.83
XRCC1-205ENST00000595789 KIF13BQ9NQT8 1826 aa20.21■□□□□ 0.83
XRCC1-205ENST00000595789 A0A0G2JLW4 131 aa20.21■□□□□ 0.83
XRCC1-205ENST00000595789 INTS5Q6P9B9 1019 aaKnown RBP20.21■□□□□ 0.83
XRCC1-205ENST00000595789 SLC52A2Q9HAB3 445 aa20.2■□□□□ 0.82
XRCC1-205ENST00000595789 CCDC87Q9NVE4 849 aa20.2■□□□□ 0.82
XRCC1-205ENST00000595789 SRP68Q9UHB9 627 aaKnown RBP20.2■□□□□ 0.82
XRCC1-205ENST00000595789 HMOX1P09601 288 aa20.19■□□□□ 0.82
XRCC1-205ENST00000595789 DPEP1P16444 411 aa20.19■□□□□ 0.82
XRCC1-205ENST00000595789 PARP3Q9Y6F1 533 aa20.19■□□□□ 0.82
XRCC1-205ENST00000595789 RNMTO43148 476 aaKnown RBP20.18■□□□□ 0.82
XRCC1-205ENST00000595789 KCNA3P22001 575 aa20.18■□□□□ 0.82
XRCC1-205ENST00000595789 FKBP8Q14318 412 aa20.18■□□□□ 0.82
XRCC1-205ENST00000595789 ZNF526Q8TF50 670 aaPredicted RBP20.18■□□□□ 0.82
XRCC1-205ENST00000595789 USP42Q9H9J4 1324 aaKnown RBP20.18■□□□□ 0.82
XRCC1-205ENST00000595789 SCN11AQ9UI33 1791 aa20.18■□□□□ 0.82
XRCC1-205ENST00000595789 C4AP0C0L4 1744 aa20.17■□□□□ 0.82
XRCC1-205ENST00000595789 MTHFSDQ2M296 383 aaKnown RBP20.17■□□□□ 0.82
XRCC1-205ENST00000595789 DNAJC10Q8IXB1 793 aa20.17■□□□□ 0.82
XRCC1-205ENST00000595789 BCS1LQ9Y276 419 aa20.17■□□□□ 0.82
XRCC1-205ENST00000595789 TJP1Q07157 1748 aa20.16■□□□□ 0.82
XRCC1-205ENST00000595789 DDR1Q08345 913 aa20.16■□□□□ 0.82
XRCC1-205ENST00000595789 CC2D1BQ5T0F9 858 aaKnown RBP20.16■□□□□ 0.82
XRCC1-205ENST00000595789 N4BP2Q86UW6 1770 aaPredicted RBP20.16■□□□□ 0.82
XRCC1-205ENST00000595789 DIAPH1O60610 1272 aaKnown RBP20.15■□□□□ 0.82
XRCC1-205ENST00000595789 TM4SF1P30408 202 aa20.15■□□□□ 0.82
XRCC1-205ENST00000595789 SLC39A6Q13433 755 aa20.15■□□□□ 0.82
XRCC1-205ENST00000595789 MRC1P22897 1456 aa20.15■□□□□ 0.82
XRCC1-205ENST00000595789 CYP19A1P11511 503 aaPredicted RBP20.14■□□□□ 0.81
XRCC1-205ENST00000595789 ADAMTS7Q9UKP4 1686 aa20.13■□□□□ 0.81
XRCC1-205ENST00000595789 SOS1Q07889 1333 aaPredicted RBP20.13■□□□□ 0.81
XRCC1-205ENST00000595789 KIF3CO14782 793 aa20.13■□□□□ 0.81
XRCC1-205ENST00000595789 NPC1L1Q9UHC9 1359 aa20.12■□□□□ 0.81
XRCC1-205ENST00000595789 FCHSD2O94868 740 aa20.12■□□□□ 0.81
XRCC1-205ENST00000595789 POLRMTO00411 1230 aaKnown RBP20.11■□□□□ 0.81
XRCC1-205ENST00000595789 ARHGAP27Q6ZUM4 889 aa20.11■□□□□ 0.81
XRCC1-205ENST00000595789 KCPQ6ZWJ8 1503 aa20.11■□□□□ 0.81
XRCC1-205ENST00000595789 USPL1Q5W0Q7 1092 aa20.1■□□□□ 0.81
XRCC1-205ENST00000595789 PIM2Q9P1W9 311 aa20.1■□□□□ 0.81
XRCC1-205ENST00000595789 COL3A1P02461 1466 aaPredicted RBP20.1■□□□□ 0.81
XRCC1-205ENST00000595789 HSPA6P17066 643 aa20.09■□□□□ 0.81
XRCC1-205ENST00000595789 VSIG10Q8N0Z9 540 aa20.09■□□□□ 0.81
XRCC1-205ENST00000595789 NARFQ9UHQ1 456 aa20.09■□□□□ 0.81
XRCC1-205ENST00000595789 ZBTB1Q9Y2K1 713 aa20.09■□□□□ 0.81
XRCC1-205ENST00000595789 BRCA1P38398 1863 aaKnown RBP20.09■□□□□ 0.81
XRCC1-205ENST00000595789 ZPR1O75312 459 aa20.08■□□□□ 0.81
XRCC1-205ENST00000595789 BCL2L12Q9HB09 334 aa20.08■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 440.9 ms