RNA–Protein interactions for RNA: ENST00000595756.1

HOMER3-208, Transcript of homer scaffold protein 3, humanhuman

TSL 2

Gene HOMER3, Length 570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-208ENST00000595756 MSL1Q68DK7 614 aa24.38■■□□□ 1.49
HOMER3-208ENST00000595756 AEBP1Q8IUX7 1158 aa24.38■■□□□ 1.49
HOMER3-208ENST00000595756 CICQ96RK0 1608 aaPredicted RBP24.38■■□□□ 1.49
HOMER3-208ENST00000595756 ZNF530Q6P9A1 599 aaPredicted RBP24.37■■□□□ 1.49
HOMER3-208ENST00000595756 ATG3Q9NT62 314 aa24.37■■□□□ 1.49
HOMER3-208ENST00000595756 IL13P35225 146 aa24.36■■□□□ 1.49
HOMER3-208ENST00000595756 AMIGO3Q86WK7 504 aa24.36■■□□□ 1.49
HOMER3-208ENST00000595756 NLGN2Q8NFZ4 835 aa24.36■■□□□ 1.49
HOMER3-208ENST00000595756 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.35■■□□□ 1.49
HOMER3-208ENST00000595756 ATP6V1AP38606 617 aa24.35■■□□□ 1.49
HOMER3-208ENST00000595756 ITPK1Q13572 414 aa24.35■■□□□ 1.49
HOMER3-208ENST00000595756 VIRMAQ69YN4 1812 aaKnown RBP24.35■■□□□ 1.49
HOMER3-208ENST00000595756 GPR162Q16538 588 aa24.34■■□□□ 1.49
HOMER3-208ENST00000595756 SULT6B1Q6IMI4 303 aa24.34■■□□□ 1.49
HOMER3-208ENST00000595756 PER1O15534 1290 aaPredicted RBP24.33■■□□□ 1.49
HOMER3-208ENST00000595756 PHF14O94880 888 aa24.33■■□□□ 1.49
HOMER3-208ENST00000595756 C1orf141Q5JVX7 400 aa24.33■■□□□ 1.49
HOMER3-208ENST00000595756 NPC1L1Q9UHC9 1359 aa24.32■■□□□ 1.48
HOMER3-208ENST00000595756 GNPATO15228 680 aa24.31■■□□□ 1.48
HOMER3-208ENST00000595756 C4AP0C0L4 1744 aa24.3■■□□□ 1.48
HOMER3-208ENST00000595756 TJP1Q07157 1748 aa24.3■■□□□ 1.48
HOMER3-208ENST00000595756 CD2APQ9Y5K6 639 aa24.3■■□□□ 1.48
HOMER3-208ENST00000595756 MRC1P22897 1456 aa24.3■■□□□ 1.48
HOMER3-208ENST00000595756 ADAMTS7Q9UKP4 1686 aa24.3■■□□□ 1.48
HOMER3-208ENST00000595756 MTHFSP49914 203 aa24.29■■□□□ 1.48
HOMER3-208ENST00000595756 CABP4P57796 275 aa24.29■■□□□ 1.48
HOMER3-208ENST00000595756 ZNF784Q8NCA9 323 aaPredicted RBP24.29■■□□□ 1.48
HOMER3-208ENST00000595756 COL3A1P02461 1466 aaPredicted RBP24.28■■□□□ 1.48
HOMER3-208ENST00000595756 SLC4A9Q96Q91 983 aa24.28■■□□□ 1.48
HOMER3-208ENST00000595756 PELP1Q8IZL8 1130 aaKnown RBP24.27■■□□□ 1.48
HOMER3-208ENST00000595756 CNTNAP4Q9C0A0 1308 aa24.27■■□□□ 1.48
HOMER3-208ENST00000595756 MYH14Q7Z406 1995 aaKnown RBP24.27■■□□□ 1.48
HOMER3-208ENST00000595756 KIF13BQ9NQT8 1826 aa24.26■■□□□ 1.47
HOMER3-208ENST00000595756 CC2D1BQ5T0F9 858 aaKnown RBP24.26■■□□□ 1.47
HOMER3-208ENST00000595756 SMIM5Q71RC9 77 aa24.26■■□□□ 1.47
HOMER3-208ENST00000595756 RBM42Q9BTD8 480 aaKnown RBP24.26■■□□□ 1.47
HOMER3-208ENST00000595756 AKAP4Q5JQC9 854 aa24.25■■□□□ 1.47
HOMER3-208ENST00000595756 RC3H1Q5TC82 1133 aaKnown RBP24.24■■□□□ 1.47
HOMER3-208ENST00000595756 RTCBQ9Y3I0 505 aaKnown RBP24.24■■□□□ 1.47
HOMER3-208ENST00000595756 GRIN3BO60391 1043 aa24.23■■□□□ 1.47
HOMER3-208ENST00000595756 YBX3P16989 372 aaKnown RBP eCLIP24.23■■□□□ 1.47
HOMER3-208ENST00000595756 ADRA2BP18089 450 aa24.23■■□□□ 1.47
HOMER3-208ENST00000595756 DIAPH1O60610 1272 aaKnown RBP24.22■■□□□ 1.47
HOMER3-208ENST00000595756 KIAA1551Q9HCM1 1747 aa24.21■■□□□ 1.47
HOMER3-208ENST00000595756 NFATC2IPQ8NCF5 419 aa24.21■■□□□ 1.47
HOMER3-208ENST00000595756 HMOX1P09601 288 aa24.2■■□□□ 1.46
HOMER3-208ENST00000595756 TRAPPC3LQ5T215 181 aa24.2■■□□□ 1.46
HOMER3-208ENST00000595756 UBR2Q8IWV8 1755 aa24.19■■□□□ 1.46
HOMER3-208ENST00000595756 RPS6KA4O75676 772 aa24.18■■□□□ 1.46
HOMER3-208ENST00000595756 SLC52A2Q9HAB3 445 aa24.18■■□□□ 1.46
HOMER3-208ENST00000595756 KCPQ6ZWJ8 1503 aa24.17■■□□□ 1.46
HOMER3-208ENST00000595756 PTCD1O75127 700 aaKnown RBP24.17■■□□□ 1.46
HOMER3-208ENST00000595756 MMP10P09238 476 aa24.16■■□□□ 1.46
HOMER3-208ENST00000595756 C10orf71Q711Q0 1435 aa24.16■■□□□ 1.46
HOMER3-208ENST00000595756 NLGN1Q8N2Q7 840 aa24.15■■□□□ 1.46
HOMER3-208ENST00000595756 ARHGEF1Q92888 912 aaKnown RBP24.15■■□□□ 1.46
HOMER3-208ENST00000595756 SIPA1L3O60292 1781 aaPredicted RBP24.14■■□□□ 1.46
HOMER3-208ENST00000595756 RNMTO43148 476 aaKnown RBP24.14■■□□□ 1.45
HOMER3-208ENST00000595756 CRKLP46109 303 aaKnown RBP24.14■■□□□ 1.45
HOMER3-208ENST00000595756 MTHFSDQ2M296 383 aaKnown RBP24.14■■□□□ 1.45
HOMER3-208ENST00000595756 PXDNLA1KZ92 1463 aa24.13■■□□□ 1.45
HOMER3-208ENST00000595756 GYS1P13807 737 aa24.13■■□□□ 1.45
HOMER3-208ENST00000595756 RFC4P35249 363 aa24.13■■□□□ 1.45
HOMER3-208ENST00000595756 LGR6Q9HBX8 967 aa24.13■■□□□ 1.45
HOMER3-208ENST00000595756 N4BP2Q86UW6 1770 aaPredicted RBP24.13■■□□□ 1.45
HOMER3-208ENST00000595756 BRCA1P38398 1863 aaKnown RBP24.12■■□□□ 1.45
HOMER3-208ENST00000595756 USP42Q9H9J4 1324 aaKnown RBP24.1■■□□□ 1.45
HOMER3-208ENST00000595756 ADCY9O60503 1353 aa24.08■■□□□ 1.45
HOMER3-208ENST00000595756 U2SURPO15042 1029 aaKnown RBP24.08■■□□□ 1.45
HOMER3-208ENST00000595756 CNGB1Q14028 1251 aaPredicted RBP24.07■■□□□ 1.44
HOMER3-208ENST00000595756 INTS5Q6P9B9 1019 aaKnown RBP24.07■■□□□ 1.44
HOMER3-208ENST00000595756 GAS2L2Q8NHY3 880 aa24.07■■□□□ 1.44
HOMER3-208ENST00000595756 CCDC87Q9NVE4 849 aa24.07■■□□□ 1.44
HOMER3-208ENST00000595756 TGFB2P61812 414 aa24.06■■□□□ 1.44
HOMER3-208ENST00000595756 DNAJC10Q8IXB1 793 aa24.06■■□□□ 1.44
HOMER3-208ENST00000595756 ATP10DQ9P241 1426 aa24.06■■□□□ 1.44
HOMER3-208ENST00000595756 SLC39A6Q13433 755 aa24.05■■□□□ 1.44
HOMER3-208ENST00000595756 VSIG10Q8N0Z9 540 aa24.05■■□□□ 1.44
HOMER3-208ENST00000595756 CFAP53Q96M91 514 aa24.05■■□□□ 1.44
HOMER3-208ENST00000595756 PARP3Q9Y6F1 533 aa24.05■■□□□ 1.44
HOMER3-208ENST00000595756 SOS1Q07889 1333 aaPredicted RBP24.05■■□□□ 1.44
HOMER3-208ENST00000595756 ARFGEF1Q9Y6D6 1849 aa24.04■■□□□ 1.44
HOMER3-208ENST00000595756 GIGYF1O75420 1035 aaPredicted RBP24.03■■□□□ 1.44
HOMER3-208ENST00000595756 CYP19A1P11511 503 aaPredicted RBP24.03■■□□□ 1.44
HOMER3-208ENST00000595756 SRP68Q9UHB9 627 aaKnown RBP24.03■■□□□ 1.44
HOMER3-208ENST00000595756 COL15A1P39059 1388 aa24.03■■□□□ 1.44
HOMER3-208ENST00000595756 GNAT3A8MTJ3 354 aa24.02■■□□□ 1.44
HOMER3-208ENST00000595756 C1QTNF8P60827 252 aa24.02■■□□□ 1.44
HOMER3-208ENST00000595756 WWC3Q9ULE0 1092 aa24.02■■□□□ 1.44
HOMER3-208ENST00000595756 NRXN2Q9P2S2 1712 aa24.01■■□□□ 1.43
HOMER3-208ENST00000595756 FKBP8Q14318 412 aa24.01■■□□□ 1.43
HOMER3-208ENST00000595756 SCN7AQ01118 1682 aa24.01■■□□□ 1.43
HOMER3-208ENST00000595756 CEMIPQ8WUJ3 1361 aa24.01■■□□□ 1.43
HOMER3-208ENST00000595756 TTC5Q8N0Z6 440 aa24■■□□□ 1.43
HOMER3-208ENST00000595756 RSPH6AQ9H0K4 717 aa24■■□□□ 1.43
HOMER3-208ENST00000595756 AFDNP55196 1824 aaKnown RBP24■■□□□ 1.43
HOMER3-208ENST00000595756 PPP2R1AP30153 589 aa23.99■■□□□ 1.43
HOMER3-208ENST00000595756 TEFQ10587 303 aa23.99■■□□□ 1.43
HOMER3-208ENST00000595756 ZBTB1Q9Y2K1 713 aa23.99■■□□□ 1.43
HOMER3-208ENST00000595756 ZPR1O75312 459 aa23.98■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms