RNA–Protein interactions for RNA: ENST00000594107.1

XRCC1-203, Transcript of X-ray repair cross complementing 1, humanhuman

TSL 2

Gene XRCC1, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-203ENST00000594107 ITPK1Q13572 414 aa11.93□□□□□ -0.5
XRCC1-203ENST00000594107 C9orf131Q5VYM1 1079 aa11.93□□□□□ -0.5
XRCC1-203ENST00000594107 TNS4Q8IZW8 715 aa11.93□□□□□ -0.5
XRCC1-203ENST00000594107 TMOD3Q9NYL9 352 aa11.93□□□□□ -0.5
XRCC1-203ENST00000594107 ASAP1Q9ULH1 1129 aa11.93□□□□□ -0.5
XRCC1-203ENST00000594107 SPG7Q9UQ90 795 aa11.93□□□□□ -0.5
XRCC1-203ENST00000594107 PXDNLA1KZ92 1463 aa11.93□□□□□ -0.5
XRCC1-203ENST00000594107 KIAA1551Q9HCM1 1747 aa11.92□□□□□ -0.5
XRCC1-203ENST00000594107 ST20-MTHFSA0A0A6YYL1 179 aa11.92□□□□□ -0.5
XRCC1-203ENST00000594107 FSTL1Q12841 308 aa11.92□□□□□ -0.5
XRCC1-203ENST00000594107 RRAGCQ9HB90 399 aa11.92□□□□□ -0.5
XRCC1-203ENST00000594107 CCDC87Q9NVE4 849 aa11.92□□□□□ -0.5
XRCC1-203ENST00000594107 SLC24A1O60721 1099 aa11.91□□□□□ -0.5
XRCC1-203ENST00000594107 TESK2Q96S53 571 aa11.91□□□□□ -0.5
XRCC1-203ENST00000594107 RTCBQ9Y3I0 505 aaKnown RBP11.91□□□□□ -0.5
XRCC1-203ENST00000594107 PARP3Q9Y6F1 533 aa11.91□□□□□ -0.5
XRCC1-203ENST00000594107 KDM2BQ8NHM5 1336 aa11.9□□□□□ -0.5
XRCC1-203ENST00000594107 PRELPP51888 382 aa11.9□□□□□ -0.5
XRCC1-203ENST00000594107 ARHGEF1Q92888 912 aaKnown RBP11.9□□□□□ -0.5
XRCC1-203ENST00000594107 PIM2Q9P1W9 311 aa11.9□□□□□ -0.5
XRCC1-203ENST00000594107 FLT4P35916 1363 aa11.9□□□□□ -0.5
XRCC1-203ENST00000594107 PKD1L3Q7Z443 1732 aa11.89□□□□□ -0.51
XRCC1-203ENST00000594107 KCNA3P22001 575 aa11.89□□□□□ -0.51
XRCC1-203ENST00000594107 RFC4P35249 363 aa11.89□□□□□ -0.51
XRCC1-203ENST00000594107 IFNL2Q8IZJ0 200 aa11.89□□□□□ -0.51
XRCC1-203ENST00000594107 RBM42Q9BTD8 480 aaKnown RBP11.89□□□□□ -0.51
XRCC1-203ENST00000594107 ATG3Q9NT62 314 aa11.89□□□□□ -0.51
XRCC1-203ENST00000594107 PPM1GO15355 546 aaPredicted RBP11.88□□□□□ -0.51
XRCC1-203ENST00000594107 EMILIN1Q9Y6C2 1016 aa11.88□□□□□ -0.51
XRCC1-203ENST00000594107 KIF24Q5T7B8 1368 aa11.88□□□□□ -0.51
XRCC1-203ENST00000594107 ARFGEF1Q9Y6D6 1849 aa11.88□□□□□ -0.51
XRCC1-203ENST00000594107 C10orf71Q711Q0 1435 aa11.87□□□□□ -0.51
XRCC1-203ENST00000594107 BRCA1P38398 1863 aaKnown RBP11.87□□□□□ -0.51
XRCC1-203ENST00000594107 KCPQ6ZWJ8 1503 aa11.87□□□□□ -0.51
XRCC1-203ENST00000594107 GYS1P13807 737 aa11.87□□□□□ -0.51
XRCC1-203ENST00000594107 PHKG2P15735 406 aa11.87□□□□□ -0.51
XRCC1-203ENST00000594107 DALRD3Q5D0E6 543 aaKnown RBP11.87□□□□□ -0.51
XRCC1-203ENST00000594107 RC3H1Q5TC82 1133 aaKnown RBP11.87□□□□□ -0.51
XRCC1-203ENST00000594107 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.87□□□□□ -0.51
XRCC1-203ENST00000594107 RNF181Q9P0P0 153 aa11.87□□□□□ -0.51
XRCC1-203ENST00000594107 PLEKHG2Q9H7P9 1386 aa11.87□□□□□ -0.51
XRCC1-203ENST00000594107 C4AP0C0L4 1744 aa11.86□□□□□ -0.51
XRCC1-203ENST00000594107 RPS6KA4O75676 772 aa11.86□□□□□ -0.51
XRCC1-203ENST00000594107 ADRA2BP18089 450 aa11.86□□□□□ -0.51
XRCC1-203ENST00000594107 SMC1BQ8NDV3 1235 aa11.86□□□□□ -0.51
XRCC1-203ENST00000594107 EYA1Q99502 592 aa11.86□□□□□ -0.51
XRCC1-203ENST00000594107 KIF20BQ96Q89 1820 aa11.86□□□□□ -0.51
XRCC1-203ENST00000594107 SBF1O95248 1867 aa11.85□□□□□ -0.51
XRCC1-203ENST00000594107 DCAF5Q96JK2 942 aa11.85□□□□□ -0.51
XRCC1-203ENST00000594107 SLC4A9Q96Q91 983 aa11.85□□□□□ -0.51
XRCC1-203ENST00000594107 TONSLQ96HA7 1378 aa11.83□□□□□ -0.52
XRCC1-203ENST00000594107 CHRNA5P30532 468 aa11.83□□□□□ -0.52
XRCC1-203ENST00000594107 TNRC6CQ9HCJ0 1690 aaKnown RBP11.83□□□□□ -0.52
XRCC1-203ENST00000594107 WASHC2AQ641Q2 1341 aa11.83□□□□□ -0.52
XRCC1-203ENST00000594107 ERVV-2B6SEH9 535 aa11.82□□□□□ -0.52
XRCC1-203ENST00000594107 HSPA1AP0DMV8 641 aaKnown RBP11.82□□□□□ -0.52
XRCC1-203ENST00000594107 HSPA1BP0DMV9 641 aaKnown RBP11.82□□□□□ -0.52
XRCC1-203ENST00000594107 SRP68Q9UHB9 627 aaKnown RBP11.82□□□□□ -0.52
XRCC1-203ENST00000594107 NCAPD2Q15021 1401 aa11.82□□□□□ -0.52
XRCC1-203ENST00000594107 CNTNAP4Q9C0A0 1308 aa11.82□□□□□ -0.52
XRCC1-203ENST00000594107 KDRP35968 1356 aa11.81□□□□□ -0.52
XRCC1-203ENST00000594107 COL5A3P25940 1745 aaPredicted RBP11.81□□□□□ -0.52
XRCC1-203ENST00000594107 VEGFAP15692 232 aaPredicted RBP11.81□□□□□ -0.52
XRCC1-203ENST00000594107 CABP4P57796 275 aa11.81□□□□□ -0.52
XRCC1-203ENST00000594107 FKBP8Q14318 412 aa11.81□□□□□ -0.52
XRCC1-203ENST00000594107 CARD14Q9BXL6 1004 aa11.81□□□□□ -0.52
XRCC1-203ENST00000594107 MYH14Q7Z406 1995 aaKnown RBP11.81□□□□□ -0.52
XRCC1-203ENST00000594107 ZNF831Q5JPB2 1677 aa11.81□□□□□ -0.52
XRCC1-203ENST00000594107 PTCD1O75127 700 aaKnown RBP11.8□□□□□ -0.52
XRCC1-203ENST00000594107 CCDC88AQ3V6T2 1871 aa11.79□□□□□ -0.52
XRCC1-203ENST00000594107 GLTPD2A6NH11 291 aa11.79□□□□□ -0.52
XRCC1-203ENST00000594107 HSP90AB1P08238 724 aaKnown RBP11.79□□□□□ -0.52
XRCC1-203ENST00000594107 CRKLP46109 303 aaKnown RBP11.79□□□□□ -0.52
XRCC1-203ENST00000594107 DDR1Q08345 913 aa11.79□□□□□ -0.52
XRCC1-203ENST00000594107 CDCA8Q53HL2 280 aa11.79□□□□□ -0.52
XRCC1-203ENST00000594107 POLKQ9UBT6 870 aa11.79□□□□□ -0.52
XRCC1-203ENST00000594107 LMNB1P20700 586 aa11.78□□□□□ -0.52
XRCC1-203ENST00000594107 TM4SF1P30408 202 aa11.78□□□□□ -0.52
XRCC1-203ENST00000594107 RASSF7Q02833 373 aa11.78□□□□□ -0.52
XRCC1-203ENST00000594107 PLEKHO1Q53GL0 409 aaPredicted RBP11.78□□□□□ -0.52
XRCC1-203ENST00000594107 POLRMTO00411 1230 aaKnown RBP11.77□□□□□ -0.53
XRCC1-203ENST00000594107 EIF4A2Q14240 407 aaKnown RBP11.77□□□□□ -0.53
XRCC1-203ENST00000594107 NFATC2IPQ8NCF5 419 aa11.77□□□□□ -0.53
XRCC1-203ENST00000594107 USP42Q9H9J4 1324 aaKnown RBP11.77□□□□□ -0.53
XRCC1-203ENST00000594107 ZC3H4Q9UPT8 1303 aaKnown RBP11.77□□□□□ -0.53
XRCC1-203ENST00000594107 ZPR1O75312 459 aa11.76□□□□□ -0.53
XRCC1-203ENST00000594107 TNNT2P45379 298 aaPredicted RBP11.76□□□□□ -0.53
XRCC1-203ENST00000594107 MTHFSP49914 203 aa11.76□□□□□ -0.53
XRCC1-203ENST00000594107 DPY19L2Q6NUT2 758 aa11.76□□□□□ -0.53
XRCC1-203ENST00000594107 ANKRD26Q9UPS8 1709 aa11.76□□□□□ -0.53
XRCC1-203ENST00000594107 USPL1Q5W0Q7 1092 aa11.75□□□□□ -0.53
XRCC1-203ENST00000594107 ZNF530Q6P9A1 599 aaPredicted RBP11.75□□□□□ -0.53
XRCC1-203ENST00000594107 POTECB2RU33 542 aa11.74□□□□□ -0.53
XRCC1-203ENST00000594107 AMOTQ4VCS5 1084 aa11.74□□□□□ -0.53
XRCC1-203ENST00000594107 INTS5Q6P9B9 1019 aaKnown RBP11.74□□□□□ -0.53
XRCC1-203ENST00000594107 TTLL6Q8N841 843 aa11.74□□□□□ -0.53
XRCC1-203ENST00000594107 KDM6AO15550 1401 aaPredicted RBP11.73□□□□□ -0.53
XRCC1-203ENST00000594107 AFDNP55196 1824 aaKnown RBP11.73□□□□□ -0.53
XRCC1-203ENST00000594107 C1orf141Q5JVX7 400 aa11.73□□□□□ -0.53
XRCC1-203ENST00000594107 MKRN1Q9UHC7 482 aaKnown RBP11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms