RNA–Protein interactions for RNA: ENST00000594067.5

LIG1-206, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 2,697 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-206ENST00000594067 OSBPL3Q9H4L5 887 aa20.22■□□□□ 0.83
LIG1-206ENST00000594067 CEBPAP49715 358 aaPredicted RBP20.21■□□□□ 0.83
LIG1-206ENST00000594067 NCLP19338 710 aaKnown RBP20.21■□□□□ 0.83
LIG1-206ENST00000594067 KDRP35968 1356 aa20.21■□□□□ 0.83
LIG1-206ENST00000594067 CEP170BQ9Y4F5 1589 aaPredicted RBP20.21■□□□□ 0.83
LIG1-206ENST00000594067 FKBP5Q13451 457 aaPredicted RBP20.2■□□□□ 0.82
LIG1-206ENST00000594067 GLIPR1L2Q4G1C9 344 aa20.2■□□□□ 0.82
LIG1-206ENST00000594067 IGSF1Q8N6C5 1336 aa20.2■□□□□ 0.82
LIG1-206ENST00000594067 FLIIQ13045 1269 aa20.2■□□□□ 0.82
LIG1-206ENST00000594067 PLPPR3Q6T4P5 718 aa20.2■□□□□ 0.82
LIG1-206ENST00000594067 CWC22Q9HCG8 908 aaKnown RBP20.2■□□□□ 0.82
LIG1-206ENST00000594067 PNMA6EA0A0J9YXQ4 647 aa20.19■□□□□ 0.82
LIG1-206ENST00000594067 NUTM2GQ5VZR2 741 aa20.19■□□□□ 0.82
LIG1-206ENST00000594067 LMBRD1Q9NUN5 540 aa20.19■□□□□ 0.82
LIG1-206ENST00000594067 LRRCC1Q9C099 1032 aa20.18■□□□□ 0.82
LIG1-206ENST00000594067 EID1Q9Y6B2 187 aa20.18■□□□□ 0.82
LIG1-206ENST00000594067 ZNF445P59923 1031 aa20.17■□□□□ 0.82
LIG1-206ENST00000594067 CCDC30Q5VVM6 783 aa20.17■□□□□ 0.82
LIG1-206ENST00000594067 CAVIN1Q6NZI2 390 aaKnown RBP20.17■□□□□ 0.82
LIG1-206ENST00000594067 ZSCAN30Q86W11 494 aa20.17■□□□□ 0.82
LIG1-206ENST00000594067 ZDHHC9Q9Y397 364 aa20.17■□□□□ 0.82
LIG1-206ENST00000594067 SALL3Q9BXA9 1300 aa20.17■□□□□ 0.82
LIG1-206ENST00000594067 NLRP6P59044 892 aa20.17■□□□□ 0.82
LIG1-206ENST00000594067 NEK4P51957 841 aa20.16■□□□□ 0.82
LIG1-206ENST00000594067 GNAT3A8MTJ3 354 aa20.16■□□□□ 0.82
LIG1-206ENST00000594067 GNAI3P08754 354 aa20.16■□□□□ 0.82
LIG1-206ENST00000594067 CHAMP1Q96JM3 812 aa20.16■□□□□ 0.82
LIG1-206ENST00000594067 MX1P20591 662 aa20.15■□□□□ 0.82
LIG1-206ENST00000594067 ATP8B2P98198 1209 aa20.15■□□□□ 0.82
LIG1-206ENST00000594067 RILPL2Q969X0 211 aa20.15■□□□□ 0.82
LIG1-206ENST00000594067 LTV1Q96GA3 475 aaPredicted RBP20.15■□□□□ 0.82
LIG1-206ENST00000594067 ESYT1Q9BSJ8 1104 aa20.15■□□□□ 0.82
LIG1-206ENST00000594067 FMN2Q9NZ56 1722 aa20.15■□□□□ 0.82
LIG1-206ENST00000594067 TPM2P07951 284 aa20.15■□□□□ 0.82
LIG1-206ENST00000594067 ANP32BQ92688 251 aaKnown RBP20.15■□□□□ 0.82
LIG1-206ENST00000594067 LRRFIP2Q9Y608 721 aaKnown RBP20.15■□□□□ 0.82
LIG1-206ENST00000594067 TRIM6-TRIM34B2RNG4 842 aa20.14■□□□□ 0.82
LIG1-206ENST00000594067 PRPF40AO75400 957 aaKnown RBP20.14■□□□□ 0.82
LIG1-206ENST00000594067 FOXD4L5Q5VV16 416 aaPredicted RBP20.14■□□□□ 0.82
LIG1-206ENST00000594067 FOXD4L4Q8WXT5 416 aaPredicted RBP20.14■□□□□ 0.82
LIG1-206ENST00000594067 HTATSF1O43719 755 aaKnown RBP20.14■□□□□ 0.81
LIG1-206ENST00000594067 IL17REQ8NFR9 667 aa20.13■□□□□ 0.81
LIG1-206ENST00000594067 HOXC9P31274 260 aa20.13■□□□□ 0.81
LIG1-206ENST00000594067 ZSCAN23Q3MJ62 389 aa20.13■□□□□ 0.81
LIG1-206ENST00000594067 PALD1Q9ULE6 856 aa20.13■□□□□ 0.81
LIG1-206ENST00000594067 KIAA1211Q6ZU35 1233 aa20.12■□□□□ 0.81
LIG1-206ENST00000594067 TMX3Q96JJ7 454 aa20.12■□□□□ 0.81
LIG1-206ENST00000594067 ANO2Q9NQ90 1003 aa20.12■□□□□ 0.81
LIG1-206ENST00000594067 CHMLP26374 656 aa20.11■□□□□ 0.81
LIG1-206ENST00000594067 NOL8Q76FK4 1167 aaKnown RBP20.11■□□□□ 0.81
LIG1-206ENST00000594067 RBM27Q9P2N5 1060 aaKnown RBP20.11■□□□□ 0.81
LIG1-206ENST00000594067 OFD1O75665 1012 aa20.1■□□□□ 0.81
LIG1-206ENST00000594067 UNC5CLQ8IV45 518 aa20.1■□□□□ 0.81
LIG1-206ENST00000594067 GPT2Q8TD30 523 aa20.1■□□□□ 0.81
LIG1-206ENST00000594067 TBX22Q9Y458 520 aa20.1■□□□□ 0.81
LIG1-206ENST00000594067 USHBP1Q8N6Y0 703 aa20.1■□□□□ 0.81
LIG1-206ENST00000594067 USP44Q9H0E7 712 aa20.1■□□□□ 0.81
LIG1-206ENST00000594067 DIP2AQ14689 1571 aa20.1■□□□□ 0.81
LIG1-206ENST00000594067 MCCP23508 829 aa20.1■□□□□ 0.81
LIG1-206ENST00000594067 TAF7Q15545 349 aaPredicted RBP20.1■□□□□ 0.81
LIG1-206ENST00000594067 VSIG10Q8N0Z9 540 aa20.1■□□□□ 0.81
LIG1-206ENST00000594067 RBSNQ9H1K0 784 aa20.1■□□□□ 0.81
LIG1-206ENST00000594067 IL1RAPL2Q9NP60 686 aa20.1■□□□□ 0.81
LIG1-206ENST00000594067 PIK3C2AO00443 1686 aa20.09■□□□□ 0.81
LIG1-206ENST00000594067 RGPD8O14715 1765 aaPredicted RBP20.09■□□□□ 0.81
LIG1-206ENST00000594067 MAP3K5Q99683 1374 aa20.09■□□□□ 0.81
LIG1-206ENST00000594067 MSNP26038 577 aaKnown RBP20.09■□□□□ 0.81
LIG1-206ENST00000594067 PHAXQ9H814 394 aaKnown RBP20.09■□□□□ 0.81
LIG1-206ENST00000594067 UBTFL1P0CB47 393 aaPredicted RBP20.08■□□□□ 0.81
LIG1-206ENST00000594067 HS1BP3Q53T59 392 aa20.08■□□□□ 0.8
LIG1-206ENST00000594067 HDGFL1Q5TGJ6 251 aa20.08■□□□□ 0.8
LIG1-206ENST00000594067 STAP2Q9UGK3 403 aa20.08■□□□□ 0.8
LIG1-206ENST00000594067 KIF13AQ9H1H9 1805 aa20.07■□□□□ 0.8
LIG1-206ENST00000594067 PRIM1P49642 420 aaKnown RBP20.07■□□□□ 0.8
LIG1-206ENST00000594067 ABTB2Q8N961 1025 aa20.07■□□□□ 0.8
LIG1-206ENST00000594067 PDLIM2Q96JY6 352 aa20.07■□□□□ 0.8
LIG1-206ENST00000594067 NUTM1Q86Y26 1132 aa20.07■□□□□ 0.8
LIG1-206ENST00000594067 FAM208AQ9UK61 1670 aaKnown RBP20.06■□□□□ 0.8
LIG1-206ENST00000594067 XRN1Q8IZH2 1706 aaKnown RBP20.06■□□□□ 0.8
LIG1-206ENST00000594067 C14orf37Q86TY3 774 aa20.06■□□□□ 0.8
LIG1-206ENST00000594067 NSFL1CQ9UNZ2 370 aaKnown RBP20.06■□□□□ 0.8
LIG1-206ENST00000594067 LRRC37A3O60309 1634 aa20.06■□□□□ 0.8
LIG1-206ENST00000594067 MCM2P49736 904 aa20.06■□□□□ 0.8
LIG1-206ENST00000594067 SRCIN1Q9C0H9 1055 aa20.06■□□□□ 0.8
LIG1-206ENST00000594067 UPF3BQ9BZI7 483 aaKnown RBP20.05■□□□□ 0.8
LIG1-206ENST00000594067 IL25Q9H293 177 aa20.05■□□□□ 0.8
LIG1-206ENST00000594067 MAP4K4O95819 1239 aaPredicted RBP20.05■□□□□ 0.8
LIG1-206ENST00000594067 NWD1Q149M9 1564 aa20.04■□□□□ 0.8
LIG1-206ENST00000594067 EIF2S2P20042 333 aaKnown RBP20.04■□□□□ 0.8
LIG1-206ENST00000594067 CUL4AQ13619 759 aa20.04■□□□□ 0.8
LIG1-206ENST00000594067 NOL7Q9UMY1 257 aaKnown RBP20.04■□□□□ 0.8
LIG1-206ENST00000594067 ANAPC15P60006 121 aa20.04■□□□□ 0.8
LIG1-206ENST00000594067 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.04■□□□□ 0.8
LIG1-206ENST00000594067 PPP1R42Q7Z4L9 355 aa20.04■□□□□ 0.8
LIG1-206ENST00000594067 ZMYND15Q9H091 742 aa20.04■□□□□ 0.8
LIG1-206ENST00000594067 TMEM63CQ9P1W3 806 aa20.04■□□□□ 0.8
LIG1-206ENST00000594067 SOS1Q07889 1333 aaPredicted RBP20.03■□□□□ 0.8
LIG1-206ENST00000594067 SURF6O75683 361 aaKnown RBP20.03■□□□□ 0.8
LIG1-206ENST00000594067 BRD1O95696 1058 aa20.03■□□□□ 0.8
LIG1-206ENST00000594067 SSH3Q8TE77 659 aa20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 92.5 ms