RNA–Protein interactions for RNA: ENST00000592885.5

APOC1-209, Transcript of apolipoprotein C1, humanhuman

TSL 3 BASIC

Gene APOC1, Length 562 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-209ENST00000592885 LINC00116Q8NCU8 138 aa18.07■□□□□ 0.48
APOC1-209ENST00000592885 ATG3Q9NT62 314 aa18.07■□□□□ 0.48
APOC1-209ENST00000592885 SCN11AQ9UI33 1791 aa18.07■□□□□ 0.48
APOC1-209ENST00000592885 NPC1L1Q9UHC9 1359 aa18.06■□□□□ 0.48
APOC1-209ENST00000592885 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.06■□□□□ 0.48
APOC1-209ENST00000592885 C1orf141Q5JVX7 400 aa18.06■□□□□ 0.48
APOC1-209ENST00000592885 MSL1Q68DK7 614 aa18.06■□□□□ 0.48
APOC1-209ENST00000592885 ITPK1Q13572 414 aa18.05■□□□□ 0.48
APOC1-209ENST00000592885 SULT6B1Q6IMI4 303 aa18.05■□□□□ 0.48
APOC1-209ENST00000592885 AEBP1Q8IUX7 1158 aa18.05■□□□□ 0.48
APOC1-209ENST00000592885 NLGN2Q8NFZ4 835 aa18.05■□□□□ 0.48
APOC1-209ENST00000592885 CD2APQ9Y5K6 639 aa18.05■□□□□ 0.48
APOC1-209ENST00000592885 PER1O15534 1290 aaPredicted RBP18.04■□□□□ 0.48
APOC1-209ENST00000592885 PHF14O94880 888 aa18.04■□□□□ 0.48
APOC1-209ENST00000592885 UTRNP46939 3433 aa18.04■□□□□ 0.48
APOC1-209ENST00000592885 GNPATO15228 680 aa18.03■□□□□ 0.48
APOC1-209ENST00000592885 MTHFSP49914 203 aa18.03■□□□□ 0.48
APOC1-209ENST00000592885 CABP4P57796 275 aa18.03■□□□□ 0.48
APOC1-209ENST00000592885 AMIGO3Q86WK7 504 aa18.03■□□□□ 0.48
APOC1-209ENST00000592885 CNTNAP4Q9C0A0 1308 aa18.02■□□□□ 0.48
APOC1-209ENST00000592885 MRC1P22897 1456 aa18.02■□□□□ 0.48
APOC1-209ENST00000592885 GRIN3BO60391 1043 aa18.02■□□□□ 0.48
APOC1-209ENST00000592885 ZNF784Q8NCA9 323 aaPredicted RBP18.02■□□□□ 0.48
APOC1-209ENST00000592885 VIRMAQ69YN4 1812 aaKnown RBP18.02■□□□□ 0.47
APOC1-209ENST00000592885 ADRA2BP18089 450 aa18.01■□□□□ 0.47
APOC1-209ENST00000592885 RC3H1Q5TC82 1133 aaKnown RBP18.01■□□□□ 0.47
APOC1-209ENST00000592885 ADAMTS7Q9UKP4 1686 aa18.01■□□□□ 0.47
APOC1-209ENST00000592885 TJP1Q07157 1748 aa18.01■□□□□ 0.47
APOC1-209ENST00000592885 AKAP4Q5JQC9 854 aa18■□□□□ 0.47
APOC1-209ENST00000592885 PELP1Q8IZL8 1130 aaKnown RBP18■□□□□ 0.47
APOC1-209ENST00000592885 C4AP0C0L4 1744 aa18■□□□□ 0.47
APOC1-209ENST00000592885 KIF13BQ9NQT8 1826 aa18■□□□□ 0.47
APOC1-209ENST00000592885 RBM42Q9BTD8 480 aaKnown RBP17.99■□□□□ 0.47
APOC1-209ENST00000592885 RTCBQ9Y3I0 505 aaKnown RBP17.99■□□□□ 0.47
APOC1-209ENST00000592885 COL3A1P02461 1466 aaPredicted RBP17.99■□□□□ 0.47
APOC1-209ENST00000592885 SLC4A9Q96Q91 983 aa17.98■□□□□ 0.47
APOC1-209ENST00000592885 DIAPH1O60610 1272 aaKnown RBP17.97■□□□□ 0.47
APOC1-209ENST00000592885 YBX3P16989 372 aaKnown RBP eCLIP17.97■□□□□ 0.47
APOC1-209ENST00000592885 CC2D1BQ5T0F9 858 aaKnown RBP17.97■□□□□ 0.47
APOC1-209ENST00000592885 TRAPPC3LQ5T215 181 aa17.97■□□□□ 0.47
APOC1-209ENST00000592885 MYH14Q7Z406 1995 aaKnown RBP17.97■□□□□ 0.47
APOC1-209ENST00000592885 RPS6KA4O75676 772 aa17.95■□□□□ 0.46
APOC1-209ENST00000592885 SMIM5Q71RC9 77 aa17.95■□□□□ 0.46
APOC1-209ENST00000592885 NFATC2IPQ8NCF5 419 aa17.95■□□□□ 0.46
APOC1-209ENST00000592885 NLGN1Q8N2Q7 840 aa17.94■□□□□ 0.46
APOC1-209ENST00000592885 SLC52A2Q9HAB3 445 aa17.94■□□□□ 0.46
APOC1-209ENST00000592885 KIAA1551Q9HCM1 1747 aa17.93■□□□□ 0.46
APOC1-209ENST00000592885 HMOX1P09601 288 aa17.93■□□□□ 0.46
APOC1-209ENST00000592885 UBR2Q8IWV8 1755 aa17.93■□□□□ 0.46
APOC1-209ENST00000592885 C10orf71Q711Q0 1435 aa17.92■□□□□ 0.46
APOC1-209ENST00000592885 PTCD1O75127 700 aaKnown RBP17.92■□□□□ 0.46
APOC1-209ENST00000592885 MMP10P09238 476 aa17.92■□□□□ 0.46
APOC1-209ENST00000592885 ARHGEF1Q92888 912 aaKnown RBP17.92■□□□□ 0.46
APOC1-209ENST00000592885 RNMTO43148 476 aaKnown RBP17.91■□□□□ 0.46
APOC1-209ENST00000592885 RFC4P35249 363 aa17.91■□□□□ 0.46
APOC1-209ENST00000592885 CRKLP46109 303 aaKnown RBP17.91■□□□□ 0.46
APOC1-209ENST00000592885 KCPQ6ZWJ8 1503 aa17.91■□□□□ 0.46
APOC1-209ENST00000592885 GYS1P13807 737 aa17.9■□□□□ 0.46
APOC1-209ENST00000592885 MTHFSDQ2M296 383 aaKnown RBP17.9■□□□□ 0.46
APOC1-209ENST00000592885 GOLGB1Q14789 3259 aaKnown RBP17.9■□□□□ 0.46
APOC1-209ENST00000592885 PXDNLA1KZ92 1463 aa17.89■□□□□ 0.45
APOC1-209ENST00000592885 SIPA1L3O60292 1781 aaPredicted RBP17.89■□□□□ 0.45
APOC1-209ENST00000592885 LGR6Q9HBX8 967 aa17.88■□□□□ 0.45
APOC1-209ENST00000592885 CCDC87Q9NVE4 849 aa17.88■□□□□ 0.45
APOC1-209ENST00000592885 N4BP2Q86UW6 1770 aaPredicted RBP17.87■□□□□ 0.45
APOC1-209ENST00000592885 BRCA1P38398 1863 aaKnown RBP17.87■□□□□ 0.45
APOC1-209ENST00000592885 TGFB2P61812 414 aa17.87■□□□□ 0.45
APOC1-209ENST00000592885 VSIG10Q8N0Z9 540 aa17.87■□□□□ 0.45
APOC1-209ENST00000592885 GAS2L2Q8NHY3 880 aa17.87■□□□□ 0.45
APOC1-209ENST00000592885 CFAP53Q96M91 514 aa17.87■□□□□ 0.45
APOC1-209ENST00000592885 USP42Q9H9J4 1324 aaKnown RBP17.87■□□□□ 0.45
APOC1-209ENST00000592885 ADCY9O60503 1353 aa17.87■□□□□ 0.45
APOC1-209ENST00000592885 PARP3Q9Y6F1 533 aa17.86■□□□□ 0.45
APOC1-209ENST00000592885 U2SURPO15042 1029 aaKnown RBP17.85■□□□□ 0.45
APOC1-209ENST00000592885 GIGYF1O75420 1035 aaPredicted RBP17.85■□□□□ 0.45
APOC1-209ENST00000592885 INTS5Q6P9B9 1019 aaKnown RBP17.85■□□□□ 0.45
APOC1-209ENST00000592885 ATP10DQ9P241 1426 aa17.85■□□□□ 0.45
APOC1-209ENST00000592885 SOS1Q07889 1333 aaPredicted RBP17.84■□□□□ 0.45
APOC1-209ENST00000592885 DNAJC10Q8IXB1 793 aa17.84■□□□□ 0.45
APOC1-209ENST00000592885 GNAT3A8MTJ3 354 aa17.83■□□□□ 0.44
APOC1-209ENST00000592885 CYP19A1P11511 503 aaPredicted RBP17.83■□□□□ 0.44
APOC1-209ENST00000592885 C1QTNF8P60827 252 aa17.83■□□□□ 0.44
APOC1-209ENST00000592885 ARFGEF1Q9Y6D6 1849 aa17.83■□□□□ 0.44
APOC1-209ENST00000592885 COL15A1P39059 1388 aa17.82■□□□□ 0.44
APOC1-209ENST00000592885 SLC39A6Q13433 755 aa17.82■□□□□ 0.44
APOC1-209ENST00000592885 TTC5Q8N0Z6 440 aa17.82■□□□□ 0.44
APOC1-209ENST00000592885 TEFQ10587 303 aa17.81■□□□□ 0.44
APOC1-209ENST00000592885 SRP68Q9UHB9 627 aaKnown RBP17.81■□□□□ 0.44
APOC1-209ENST00000592885 NUDCQ9Y266 331 aa17.81■□□□□ 0.44
APOC1-209ENST00000592885 NRXN2Q9P2S2 1712 aa17.81■□□□□ 0.44
APOC1-209ENST00000592885 CEMIPQ8WUJ3 1361 aa17.8■□□□□ 0.44
APOC1-209ENST00000592885 ZPR1O75312 459 aa17.8■□□□□ 0.44
APOC1-209ENST00000592885 CNGB1Q14028 1251 aaPredicted RBP17.8■□□□□ 0.44
APOC1-209ENST00000592885 FKBP8Q14318 412 aa17.8■□□□□ 0.44
APOC1-209ENST00000592885 RSPH6AQ9H0K4 717 aa17.79■□□□□ 0.44
APOC1-209ENST00000592885 SCN7AQ01118 1682 aa17.79■□□□□ 0.44
APOC1-209ENST00000592885 PPP2R1AP30153 589 aa17.78■□□□□ 0.44
APOC1-209ENST00000592885 PRKAR2BP31323 418 aa17.78■□□□□ 0.44
APOC1-209ENST00000592885 DDR1Q08345 913 aa17.78■□□□□ 0.44
APOC1-209ENST00000592885 IL17REQ8NFR9 667 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms