RNA–Protein interactions for RNA: ENST00000592776.1

PTPN2-215, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 5

Gene PTPN2, Length 772 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-215ENST00000592776 ERVV-2B6SEH9 535 aa29.87■■■□□ 2.37
PTPN2-215ENST00000592776 HSP90AB1P08238 724 aaKnown RBP29.87■■■□□ 2.37
PTPN2-215ENST00000592776 KDRP35968 1356 aa29.87■■■□□ 2.37
PTPN2-215ENST00000592776 MAP3K5Q99683 1374 aa29.87■■■□□ 2.37
PTPN2-215ENST00000592776 HMOX1P09601 288 aa29.86■■■□□ 2.37
PTPN2-215ENST00000592776 SLC4A9Q96Q91 983 aa29.86■■■□□ 2.37
PTPN2-215ENST00000592776 CABP4P57796 275 aa29.85■■■□□ 2.37
PTPN2-215ENST00000592776 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP29.84■■■□□ 2.37
PTPN2-215ENST00000592776 C1orf141Q5JVX7 400 aa29.84■■■□□ 2.37
PTPN2-215ENST00000592776 FLAD1Q8NFF5 587 aa29.84■■■□□ 2.37
PTPN2-215ENST00000592776 NLGN2Q8NFZ4 835 aa29.84■■■□□ 2.37
PTPN2-215ENST00000592776 RBM42Q9BTD8 480 aaKnown RBP29.84■■■□□ 2.37
PTPN2-215ENST00000592776 HMGB2P26583 209 aaKnown RBP29.82■■■□□ 2.36
PTPN2-215ENST00000592776 UBR3Q6ZT12 1888 aa29.82■■■□□ 2.36
PTPN2-215ENST00000592776 GNPATO15228 680 aa29.8■■■□□ 2.36
PTPN2-215ENST00000592776 DIAPH1O60610 1272 aaKnown RBP29.8■■■□□ 2.36
PTPN2-215ENST00000592776 NFATC2IPQ8NCF5 419 aa29.8■■■□□ 2.36
PTPN2-215ENST00000592776 NPC1L1Q9UHC9 1359 aa29.77■■■□□ 2.36
PTPN2-215ENST00000592776 GPR162Q16538 588 aa29.77■■■□□ 2.36
PTPN2-215ENST00000592776 PELP1Q8IZL8 1130 aaKnown RBP29.77■■■□□ 2.36
PTPN2-215ENST00000592776 LGR6Q9HBX8 967 aa29.77■■■□□ 2.36
PTPN2-215ENST00000592776 SSFA2P28290 1259 aa29.76■■■□□ 2.35
PTPN2-215ENST00000592776 PTCD1O75127 700 aaKnown RBP29.75■■■□□ 2.35
PTPN2-215ENST00000592776 AKAP4Q5JQC9 854 aa29.74■■■□□ 2.35
PTPN2-215ENST00000592776 COL3A1P02461 1466 aaPredicted RBP29.74■■■□□ 2.35
PTPN2-215ENST00000592776 MTHFSDQ2M296 383 aaKnown RBP29.73■■■□□ 2.35
PTPN2-215ENST00000592776 U2SURPO15042 1029 aaKnown RBP29.71■■■□□ 2.35
PTPN2-215ENST00000592776 SCN11AQ9UI33 1791 aa29.7■■■□□ 2.35
PTPN2-215ENST00000592776 RNMTO43148 476 aaKnown RBP29.69■■■□□ 2.34
PTPN2-215ENST00000592776 RTCBQ9Y3I0 505 aaKnown RBP29.69■■■□□ 2.34
PTPN2-215ENST00000592776 YBX3P16989 372 aaKnown RBP eCLIP29.67■■■□□ 2.34
PTPN2-215ENST00000592776 TRAPPC3LQ5T215 181 aa29.67■■■□□ 2.34
PTPN2-215ENST00000592776 RC3H1Q5TC82 1133 aaKnown RBP29.67■■■□□ 2.34
PTPN2-215ENST00000592776 SLC52A2Q9HAB3 445 aa29.67■■■□□ 2.34
PTPN2-215ENST00000592776 COL5A3P25940 1745 aaPredicted RBP29.67■■■□□ 2.34
PTPN2-215ENST00000592776 ZNF831Q5JPB2 1677 aa29.66■■■□□ 2.34
PTPN2-215ENST00000592776 UTRNP46939 3433 aa29.66■■■□□ 2.34
PTPN2-215ENST00000592776 SLC39A6Q13433 755 aa29.65■■■□□ 2.34
PTPN2-215ENST00000592776 ARHGEF1Q92888 912 aaKnown RBP29.65■■■□□ 2.34
PTPN2-215ENST00000592776 CD2APQ9Y5K6 639 aa29.65■■■□□ 2.34
PTPN2-215ENST00000592776 CNTNAP4Q9C0A0 1308 aa29.65■■■□□ 2.34
PTPN2-215ENST00000592776 RPS6KA4O75676 772 aa29.64■■■□□ 2.34
PTPN2-215ENST00000592776 MYH14Q7Z406 1995 aaKnown RBP29.63■■■□□ 2.33
PTPN2-215ENST00000592776 CRKLP46109 303 aaKnown RBP29.61■■■□□ 2.33
PTPN2-215ENST00000592776 WWC3Q9ULE0 1092 aa29.61■■■□□ 2.33
PTPN2-215ENST00000592776 TJP1Q07157 1748 aa29.6■■■□□ 2.33
PTPN2-215ENST00000592776 MMP10P09238 476 aa29.6■■■□□ 2.33
PTPN2-215ENST00000592776 PPP2R1AP30153 589 aa29.6■■■□□ 2.33
PTPN2-215ENST00000592776 DNAJC10Q8IXB1 793 aa29.6■■■□□ 2.33
PTPN2-215ENST00000592776 ZNF784Q8NCA9 323 aaPredicted RBP29.6■■■□□ 2.33
PTPN2-215ENST00000592776 VIRMAQ69YN4 1812 aaKnown RBP29.59■■■□□ 2.33
PTPN2-215ENST00000592776 CHD4Q14839 1912 aa29.59■■■□□ 2.33
PTPN2-215ENST00000592776 MRC1P22897 1456 aa29.58■■■□□ 2.33
PTPN2-215ENST00000592776 RFC4P35249 363 aa29.57■■■□□ 2.32
PTPN2-215ENST00000592776 INTS5Q6P9B9 1019 aaKnown RBP29.57■■■□□ 2.32
PTPN2-215ENST00000592776 CFAP53Q96M91 514 aa29.57■■■□□ 2.32
PTPN2-215ENST00000592776 GYS1P13807 737 aa29.56■■■□□ 2.32
PTPN2-215ENST00000592776 ADRA2BP18089 450 aa29.56■■■□□ 2.32
PTPN2-215ENST00000592776 PHACTR3Q96KR7 559 aa29.56■■■□□ 2.32
PTPN2-215ENST00000592776 SRP68Q9UHB9 627 aaKnown RBP29.56■■■□□ 2.32
PTPN2-215ENST00000592776 ADAMTS7Q9UKP4 1686 aa29.56■■■□□ 2.32
PTPN2-215ENST00000592776 IL17REQ8NFR9 667 aa29.55■■■□□ 2.32
PTPN2-215ENST00000592776 PRKAR2BP31323 418 aa29.54■■■□□ 2.32
PTPN2-215ENST00000592776 NLGN1Q8N2Q7 840 aa29.54■■■□□ 2.32
PTPN2-215ENST00000592776 GOLGB1Q14789 3259 aaKnown RBP29.54■■■□□ 2.32
PTPN2-215ENST00000592776 RSPH6AQ9H0K4 717 aa29.53■■■□□ 2.32
PTPN2-215ENST00000592776 KCPQ6ZWJ8 1503 aa29.53■■■□□ 2.32
PTPN2-215ENST00000592776 C4AP0C0L4 1744 aa29.52■■■□□ 2.32
PTPN2-215ENST00000592776 GNAT3A8MTJ3 354 aa29.52■■■□□ 2.32
PTPN2-215ENST00000592776 GAS2L2Q8NHY3 880 aa29.52■■■□□ 2.32
PTPN2-215ENST00000592776 GRIN3BO60391 1043 aa29.51■■■□□ 2.31
PTPN2-215ENST00000592776 CICQ96RK0 1608 aaPredicted RBP29.5■■■□□ 2.31
PTPN2-215ENST00000592776 CYP19A1P11511 503 aaPredicted RBP29.5■■■□□ 2.31
PTPN2-215ENST00000592776 CCDC87Q9NVE4 849 aa29.5■■■□□ 2.31
PTPN2-215ENST00000592776 U2AF1L5P0DN76 240 aaPredicted RBP29.49■■■□□ 2.31
PTPN2-215ENST00000592776 U2AF1Q01081 240 aaKnown RBP eCLIP29.49■■■□□ 2.31
PTPN2-215ENST00000592776 FKBP8Q14318 412 aa29.48■■■□□ 2.31
PTPN2-215ENST00000592776 NUDCQ9Y266 331 aa29.48■■■□□ 2.31
PTPN2-215ENST00000592776 TEFQ10587 303 aa29.47■■■□□ 2.31
PTPN2-215ENST00000592776 USP42Q9H9J4 1324 aaKnown RBP29.46■■■□□ 2.31
PTPN2-215ENST00000592776 ZBTB1Q9Y2K1 713 aa29.45■■■□□ 2.31
PTPN2-215ENST00000592776 SOS1Q07889 1333 aaPredicted RBP29.45■■■□□ 2.3
PTPN2-215ENST00000592776 PARP3Q9Y6F1 533 aa29.44■■■□□ 2.3
PTPN2-215ENST00000592776 A0A0G2JLW4 131 aa29.43■■■□□ 2.3
PTPN2-215ENST00000592776 TTC5Q8N0Z6 440 aa29.43■■■□□ 2.3
PTPN2-215ENST00000592776 ZNF496Q96IT1 587 aaPredicted RBP29.43■■■□□ 2.3
PTPN2-215ENST00000592776 PXDNLA1KZ92 1463 aa29.42■■■□□ 2.3
PTPN2-215ENST00000592776 UBR2Q8IWV8 1755 aa29.42■■■□□ 2.3
PTPN2-215ENST00000592776 KCNQ3O43525 872 aa29.42■■■□□ 2.3
PTPN2-215ENST00000592776 DDR1Q08345 913 aa29.42■■■□□ 2.3
PTPN2-215ENST00000592776 USPL1Q5W0Q7 1092 aa29.42■■■□□ 2.3
PTPN2-215ENST00000592776 VSIG10Q8N0Z9 540 aa29.42■■■□□ 2.3
PTPN2-215ENST00000592776 ZNF790Q6PG37 636 aa29.41■■■□□ 2.3
PTPN2-215ENST00000592776 C10orf71Q711Q0 1435 aa29.41■■■□□ 2.3
PTPN2-215ENST00000592776 KIAA1551Q9HCM1 1747 aa29.41■■■□□ 2.3
PTPN2-215ENST00000592776 N4BP2Q86UW6 1770 aaPredicted RBP29.41■■■□□ 2.3
PTPN2-215ENST00000592776 CANXP27824 592 aaKnown RBP29.4■■■□□ 2.3
PTPN2-215ENST00000592776 KIF13BQ9NQT8 1826 aa29.4■■■□□ 2.3
PTPN2-215ENST00000592776 CEMIPQ8WUJ3 1361 aa29.39■■■□□ 2.3
PTPN2-215ENST00000592776 SIPA1L3O60292 1781 aaPredicted RBP29.39■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms