RNA–Protein interactions for RNA: ENST00000591764.1

DNMT1-224, Transcript of DNA methyltransferase 1, humanhuman

TSL 1 (best)

Gene DNMT1, Length 341 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-224ENST00000591764 ACEP12821 1306 aa11.9□□□□□ -0.5
DNMT1-224ENST00000591764 NUTM2GQ5VZR2 741 aa11.9□□□□□ -0.5
DNMT1-224ENST00000591764 CDK19Q9BWU1 502 aa11.9□□□□□ -0.5
DNMT1-224ENST00000591764 PPP1R1BQ9UD71 204 aaPredicted RBP11.9□□□□□ -0.5
DNMT1-224ENST00000591764 KIAA1210Q9ULL0 1709 aa11.89□□□□□ -0.51
DNMT1-224ENST00000591764 COL9A1P20849 921 aa11.89□□□□□ -0.51
DNMT1-224ENST00000591764 NLRP13Q86W25 1043 aa11.89□□□□□ -0.51
DNMT1-224ENST00000591764 SPRYD3Q8NCJ5 442 aa11.89□□□□□ -0.51
DNMT1-224ENST00000591764 BRD4O60885 1362 aaPredicted RBP11.89□□□□□ -0.51
DNMT1-224ENST00000591764 NUP188Q5SRE5 1749 aa11.89□□□□□ -0.51
DNMT1-224ENST00000591764 PLEKHG3A1L390 1219 aa11.88□□□□□ -0.51
DNMT1-224ENST00000591764 LARP1Q6PKG0 1096 aaKnown RBP11.88□□□□□ -0.51
DNMT1-224ENST00000591764 SPON1Q9HCB6 807 aa11.88□□□□□ -0.51
DNMT1-224ENST00000591764 USP19O94966 1318 aa11.87□□□□□ -0.51
DNMT1-224ENST00000591764 OVOS2A0A0G2JMS6 1433 aa11.87□□□□□ -0.51
DNMT1-224ENST00000591764 OVOS2A0A0J9YW53 1432 aa11.87□□□□□ -0.51
DNMT1-224ENST00000591764 OVOS2Q6IE36 1432 aa11.87□□□□□ -0.51
DNMT1-224ENST00000591764 PARP4Q9UKK3 1724 aaKnown RBP11.87□□□□□ -0.51
DNMT1-224ENST00000591764 PHF14O94880 888 aa11.87□□□□□ -0.51
DNMT1-224ENST00000591764 YY1P25490 414 aa11.87□□□□□ -0.51
DNMT1-224ENST00000591764 PTPN5P54829 565 aa11.87□□□□□ -0.51
DNMT1-224ENST00000591764 SRPK2P78362 688 aaKnown RBP11.87□□□□□ -0.51
DNMT1-224ENST00000591764 TYW1BQ6NUM6 668 aa11.87□□□□□ -0.51
DNMT1-224ENST00000591764 LMO7Q8WWI1 1683 aa11.87□□□□□ -0.51
DNMT1-224ENST00000591764 CAMTA1Q9Y6Y1 1673 aa11.87□□□□□ -0.51
DNMT1-224ENST00000591764 CRB1P82279 1406 aa11.86□□□□□ -0.51
DNMT1-224ENST00000591764 PPP1R3GB7ZBB8 358 aa11.86□□□□□ -0.51
DNMT1-224ENST00000591764 GCP02774 474 aa11.86□□□□□ -0.51
DNMT1-224ENST00000591764 PROX2Q3B8N5 592 aa11.86□□□□□ -0.51
DNMT1-224ENST00000591764 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.86□□□□□ -0.51
DNMT1-224ENST00000591764 NINLQ9Y2I6 1382 aa11.86□□□□□ -0.51
DNMT1-224ENST00000591764 COL5A2P05997 1499 aaPredicted RBP11.86□□□□□ -0.51
DNMT1-224ENST00000591764 RGPD3A6NKT7 1758 aaPredicted RBP11.86□□□□□ -0.51
DNMT1-224ENST00000591764 RGPD4Q7Z3J3 1758 aa11.86□□□□□ -0.51
DNMT1-224ENST00000591764 PPIP5K1Q6PFW1 1433 aa11.86□□□□□ -0.51
DNMT1-224ENST00000591764 MRPL50Q8N5N7 158 aaKnown RBP11.84□□□□□ -0.51
DNMT1-224ENST00000591764 FBXW7Q969H0 707 aa11.84□□□□□ -0.51
DNMT1-224ENST00000591764 CENPJQ9HC77 1338 aaPredicted RBP11.84□□□□□ -0.51
DNMT1-224ENST00000591764 ZBTB7CA1YPR0 619 aa11.83□□□□□ -0.52
DNMT1-224ENST00000591764 KCNQ2O43526 872 aa11.83□□□□□ -0.52
DNMT1-224ENST00000591764 DDB1Q16531 1140 aa11.83□□□□□ -0.52
DNMT1-224ENST00000591764 THSD4Q6ZMP0 1018 aa11.83□□□□□ -0.52
DNMT1-224ENST00000591764 PAXIP1Q6ZW49 1069 aaPredicted RBP11.83□□□□□ -0.52
DNMT1-224ENST00000591764 CFAP44Q96MT7 982 aa11.83□□□□□ -0.52
DNMT1-224ENST00000591764 CDCA7Q9BWT1 371 aaPredicted RBP11.83□□□□□ -0.52
DNMT1-224ENST00000591764 AATKQ6ZMQ8 1374 aa11.82□□□□□ -0.52
DNMT1-224ENST00000591764 TOM1L2Q6ZVM7 507 aa11.82□□□□□ -0.52
DNMT1-224ENST00000591764 QRICH2Q9H0J4 1663 aa11.81□□□□□ -0.52
DNMT1-224ENST00000591764 USP6P35125 1406 aa11.81□□□□□ -0.52
DNMT1-224ENST00000591764 PLSCR1O15162 318 aa11.81□□□□□ -0.52
DNMT1-224ENST00000591764 DDX12PQ92771 950 aa11.81□□□□□ -0.52
DNMT1-224ENST00000591764 WNT2BQ93097 391 aa11.81□□□□□ -0.52
DNMT1-224ENST00000591764 LRRC37A3O60309 1634 aa11.81□□□□□ -0.52
DNMT1-224ENST00000591764 AKAP12Q02952 1782 aa11.8□□□□□ -0.52
DNMT1-224ENST00000591764 GOLGA8CPA6NN73 597 aa11.8□□□□□ -0.52
DNMT1-224ENST00000591764 C6orf132Q5T0Z8 1188 aa11.8□□□□□ -0.52
DNMT1-224ENST00000591764 EPAS1Q99814 870 aa11.8□□□□□ -0.52
DNMT1-224ENST00000591764 NBPF3Q9H094 633 aa11.8□□□□□ -0.52
DNMT1-224ENST00000591764 SLIT3O75094 1523 aa11.8□□□□□ -0.52
DNMT1-224ENST00000591764 SBF2Q86WG5 1849 aa11.79□□□□□ -0.52
DNMT1-224ENST00000591764 KCNH5Q8NCM2 988 aa11.79□□□□□ -0.52
DNMT1-224ENST00000591764 RABGEF1Q9UJ41 708 aa11.79□□□□□ -0.52
DNMT1-224ENST00000591764 PEAK1Q9H792 1746 aa11.79□□□□□ -0.52
DNMT1-224ENST00000591764 EVC2Q86UK5 1308 aa11.79□□□□□ -0.52
DNMT1-224ENST00000591764 WNK3Q9BYP7 1800 aa11.79□□□□□ -0.52
DNMT1-224ENST00000591764 CSB-PGBD3P0DP91 1061 aa11.78□□□□□ -0.52
DNMT1-224ENST00000591764 WDR17Q8IZU2 1322 aa11.78□□□□□ -0.52
DNMT1-224ENST00000591764 BCL9O00512 1426 aa11.77□□□□□ -0.52
DNMT1-224ENST00000591764 CPSF1Q10570 1443 aaKnown RBP11.77□□□□□ -0.52
DNMT1-224ENST00000591764 PDIA6Q15084 440 aa11.77□□□□□ -0.53
DNMT1-224ENST00000591764 CABP1Q9NZU7 370 aa11.77□□□□□ -0.53
DNMT1-224ENST00000591764 TRPM1Q7Z4N2 1603 aa11.76□□□□□ -0.53
DNMT1-224ENST00000591764 PIK3C2AO00443 1686 aa11.76□□□□□ -0.53
DNMT1-224ENST00000591764 NBPF1Q3BBV0 1214 aa11.76□□□□□ -0.53
DNMT1-224ENST00000591764 STK32BQ9NY57 414 aa11.76□□□□□ -0.53
DNMT1-224ENST00000591764 ABCC6O95255 1503 aa11.76□□□□□ -0.53
DNMT1-224ENST00000591764 CASZ1Q86V15 1759 aa11.75□□□□□ -0.53
DNMT1-224ENST00000591764 PLCB2Q00722 1185 aa11.75□□□□□ -0.53
DNMT1-224ENST00000591764 TTC21AQ8NDW8 1320 aa11.75□□□□□ -0.53
DNMT1-224ENST00000591764 CCDC7Q96M83 1385 aa11.75□□□□□ -0.53
DNMT1-224ENST00000591764 EXOC5O00471 708 aa11.74□□□□□ -0.53
DNMT1-224ENST00000591764 CARD10Q9BWT7 1032 aa11.74□□□□□ -0.53
DNMT1-224ENST00000591764 KIAA1468Q9P260 1216 aa11.74□□□□□ -0.53
DNMT1-224ENST00000591764 COL18A1P39060 1754 aa11.73□□□□□ -0.53
DNMT1-224ENST00000591764 TNS2Q63HR2 1409 aa11.72□□□□□ -0.53
DNMT1-224ENST00000591764 ZBTB7AO95365 584 aa11.72□□□□□ -0.53
DNMT1-224ENST00000591764 NBR1Q14596 966 aa11.72□□□□□ -0.53
DNMT1-224ENST00000591764 E2F4Q16254 413 aa11.72□□□□□ -0.53
DNMT1-224ENST00000591764 ARHGEF25Q86VW2 580 aa11.72□□□□□ -0.53
DNMT1-224ENST00000591764 MARCH10Q8NA82 808 aaPredicted RBP11.72□□□□□ -0.53
DNMT1-224ENST00000591764 ROCK2O75116 1388 aaKnown RBP11.71□□□□□ -0.53
DNMT1-224ENST00000591764 TTC21BQ7Z4L5 1316 aa11.71□□□□□ -0.53
DNMT1-224ENST00000591764 TXNRD1Q16881 649 aa11.71□□□□□ -0.53
DNMT1-224ENST00000591764 TSR1Q2NL82 804 aaKnown RBP11.71□□□□□ -0.53
DNMT1-224ENST00000591764 MTFR1LQ9H019 292 aa11.71□□□□□ -0.53
DNMT1-224ENST00000591764 SEPT9Q9UHD8 586 aaPredicted RBP11.71□□□□□ -0.53
DNMT1-224ENST00000591764 UTRNP46939 3433 aa11.71□□□□□ -0.54
DNMT1-224ENST00000591764 MYOM1P52179 1685 aa11.71□□□□□ -0.54
DNMT1-224ENST00000591764 KTN1Q86UP2 1357 aaKnown RBP11.7□□□□□ -0.54
DNMT1-224ENST00000591764 RGPD5Q99666 1765 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms