RNA–Protein interactions for RNA: ENST00000591545.5

SMARCA4-216, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 5,193 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-216ENST00000591545 CAGE1Q8TC20 777 aa15.74■□□□□ 0.11
SMARCA4-216ENST00000591545 ABCF2Q9UG63 623 aa15.74■□□□□ 0.11
SMARCA4-216ENST00000591545 CDK5RAP3Q96JB5 506 aa15.74■□□□□ 0.11
SMARCA4-216ENST00000591545 MYD88Q99836 296 aa15.74■□□□□ 0.11
SMARCA4-216ENST00000591545 HYPKQ9NX55 129 aa15.74■□□□□ 0.11
SMARCA4-216ENST00000591545 RDXP35241 583 aaKnown RBP15.73■□□□□ 0.11
SMARCA4-216ENST00000591545 SOGA3Q5TF21 947 aa15.73■□□□□ 0.11
SMARCA4-216ENST00000591545 DUOX2Q9NRD8 1548 aa15.73■□□□□ 0.11
SMARCA4-216ENST00000591545 CCDC192P0DO97 292 aa15.73■□□□□ 0.11
SMARCA4-216ENST00000591545 RFC4P35249 363 aa15.73■□□□□ 0.11
SMARCA4-216ENST00000591545 CT47A1Q5JQC4 288 aaPredicted RBP15.73■□□□□ 0.11
SMARCA4-216ENST00000591545 LMTK3Q96Q04 1460 aa15.73■□□□□ 0.11
SMARCA4-216ENST00000591545 IFIT5Q13325 482 aaKnown RBP15.73■□□□□ 0.11
SMARCA4-216ENST00000591545 ZNF287Q9HBT7 754 aa15.73■□□□□ 0.11
SMARCA4-216ENST00000591545 DBF4Q9UBU7 674 aaPredicted RBP15.73■□□□□ 0.11
SMARCA4-216ENST00000591545 BCAR3O75815 825 aa15.73■□□□□ 0.11
SMARCA4-216ENST00000591545 LRRC59Q96AG4 307 aaKnown RBP15.73■□□□□ 0.11
SMARCA4-216ENST00000591545 K7ELQ4 463 aaPredicted RBP15.72■□□□□ 0.11
SMARCA4-216ENST00000591545 TXLNAP40222 546 aa15.72■□□□□ 0.11
SMARCA4-216ENST00000591545 IDH1O75874 414 aaKnown RBP15.72■□□□□ 0.11
SMARCA4-216ENST00000591545 EPS15P42566 896 aa15.72■□□□□ 0.11
SMARCA4-216ENST00000591545 PBRM1Q86U86 1689 aa15.72■□□□□ 0.11
SMARCA4-216ENST00000591545 CCDC69A6NI79 296 aa15.72■□□□□ 0.11
SMARCA4-216ENST00000591545 PATL2C9JE40 543 aaKnown RBP15.72■□□□□ 0.11
SMARCA4-216ENST00000591545 MVPQ14764 893 aaKnown RBP15.72■□□□□ 0.11
SMARCA4-216ENST00000591545 ATP2B1P20020 1258 aa15.72■□□□□ 0.11
SMARCA4-216ENST00000591545 SMARCC1Q92922 1105 aaPredicted RBP15.72■□□□□ 0.11
SMARCA4-216ENST00000591545 THUMPD2Q9BTF0 503 aaKnown RBP15.72■□□□□ 0.11
SMARCA4-216ENST00000591545 SMC2O95347 1197 aa15.71■□□□□ 0.11
SMARCA4-216ENST00000591545 NCKAP5LQ9HCH0 1330 aa15.71■□□□□ 0.11
SMARCA4-216ENST00000591545 UBAC1Q9BSL1 405 aa15.71■□□□□ 0.1
SMARCA4-216ENST00000591545 DACH1Q9UI36 760 aa15.71■□□□□ 0.1
SMARCA4-216ENST00000591545 KDM4AO75164 1064 aa15.7■□□□□ 0.1
SMARCA4-216ENST00000591545 ZCRB1Q8TBF4 217 aaKnown RBP15.7■□□□□ 0.1
SMARCA4-216ENST00000591545 CYP46A1Q9Y6A2 500 aa15.7■□□□□ 0.1
SMARCA4-216ENST00000591545 SAMD9Q5K651 1589 aa15.7■□□□□ 0.1
SMARCA4-216ENST00000591545 DDB1Q16531 1140 aa15.7■□□□□ 0.1
SMARCA4-216ENST00000591545 CCDC191Q8NCU4 936 aa15.7■□□□□ 0.1
SMARCA4-216ENST00000591545 STK38Q15208 465 aa15.7■□□□□ 0.1
SMARCA4-216ENST00000591545 STK11IPQ8N1F8 1099 aa15.7■□□□□ 0.1
SMARCA4-216ENST00000591545 AIDAQ96BJ3 306 aa15.7■□□□□ 0.1
SMARCA4-216ENST00000591545 ANKRD18BA2A2Z9 1011 aa15.7■□□□□ 0.1
SMARCA4-216ENST00000591545 ODF2Q5BJF6 829 aa15.7■□□□□ 0.1
SMARCA4-216ENST00000591545 PPP1R42Q7Z4L9 355 aa15.7■□□□□ 0.1
SMARCA4-216ENST00000591545 SLF2Q8IX21 1173 aa15.7■□□□□ 0.1
SMARCA4-216ENST00000591545 ITSN2Q9NZM3 1697 aa15.69■□□□□ 0.1
SMARCA4-216ENST00000591545 TXLNBQ8N3L3 684 aa15.69■□□□□ 0.1
SMARCA4-216ENST00000591545 CRACR2BQ8N4Y2 399 aaPredicted RBP15.69■□□□□ 0.1
SMARCA4-216ENST00000591545 MAGEC2Q9UBF1 373 aaPredicted RBP15.69■□□□□ 0.1
SMARCA4-216ENST00000591545 ZMYM3Q14202 1370 aa15.69■□□□□ 0.1
SMARCA4-216ENST00000591545 KRT18P05783 430 aaKnown RBP15.68■□□□□ 0.1
SMARCA4-216ENST00000591545 CDC5LQ99459 802 aaKnown RBP15.68■□□□□ 0.1
SMARCA4-216ENST00000591545 GRPEL1Q9HAV7 217 aa15.68■□□□□ 0.1
SMARCA4-216ENST00000591545 C6orf229H3BNL8 230 aa15.68■□□□□ 0.1
SMARCA4-216ENST00000591545 FIBPO43427 364 aa15.68■□□□□ 0.1
SMARCA4-216ENST00000591545 SLC5A1P13866 664 aa15.68■□□□□ 0.1
SMARCA4-216ENST00000591545 KRT85P78386 507 aa15.68■□□□□ 0.1
SMARCA4-216ENST00000591545 DDX46Q7L014 1031 aaKnown RBP15.68■□□□□ 0.1
SMARCA4-216ENST00000591545 EIF4G3O43432 1585 aaKnown RBP15.68■□□□□ 0.1
SMARCA4-216ENST00000591545 H0YHG0 523 aa15.68■□□□□ 0.1
SMARCA4-216ENST00000591545 DZIP1Q86YF9 867 aaKnown RBP15.68■□□□□ 0.1
SMARCA4-216ENST00000591545 NUP133Q8WUM0 1156 aa15.68■□□□□ 0.1
SMARCA4-216ENST00000591545 DNAAF4Q8WXU2 420 aa15.68■□□□□ 0.1
SMARCA4-216ENST00000591545 ZNF219Q9P2Y4 722 aaPredicted RBP15.68■□□□□ 0.1
SMARCA4-216ENST00000591545 ABCC2Q92887 1545 aa15.68■□□□□ 0.1
SMARCA4-216ENST00000591545 USP5P45974 858 aa15.68■□□□□ 0.1
SMARCA4-216ENST00000591545 NBPF14Q5TI25 921 aa15.68■□□□□ 0.1
SMARCA4-216ENST00000591545 LEKR1Q6ZMV7 388 aa15.68■□□□□ 0.1
SMARCA4-216ENST00000591545 ST5P78524 1137 aa15.67■□□□□ 0.1
SMARCA4-216ENST00000591545 KIF1BPQ96EK5 621 aa15.67■□□□□ 0.1
SMARCA4-216ENST00000591545 SPINK5Q9NQ38 1064 aaPredicted RBP15.67■□□□□ 0.1
SMARCA4-216ENST00000591545 TTLL12Q14166 644 aaPredicted RBP15.67■□□□□ 0.1
SMARCA4-216ENST00000591545 ZSCAN31Q96LW9 406 aaPredicted RBP15.67■□□□□ 0.1
SMARCA4-216ENST00000591545 UHRF1BP1Q6BDS2 1440 aa15.67■□□□□ 0.1
SMARCA4-216ENST00000591545 PAXIP1Q6ZW49 1069 aaPredicted RBP15.67■□□□□ 0.1
SMARCA4-216ENST00000591545 ZBTB3Q9H5J0 574 aa15.67■□□□□ 0.1
SMARCA4-216ENST00000591545 IL1RAPL2Q9NP60 686 aa15.67■□□□□ 0.1
SMARCA4-216ENST00000591545 LUC7LQ9NQ29 371 aaKnown RBP15.67■□□□□ 0.1
SMARCA4-216ENST00000591545 BRPF3Q9ULD4 1205 aa15.67■□□□□ 0.1
SMARCA4-216ENST00000591545 SYCP2Q9BX26 1530 aa15.67■□□□□ 0.1
SMARCA4-216ENST00000591545 MPHOSPH10O00566 681 aaKnown RBP15.67■□□□□ 0.1
SMARCA4-216ENST00000591545 SNRPA1P09661 255 aaKnown RBP15.67■□□□□ 0.1
SMARCA4-216ENST00000591545 CBFA2T2O43439 604 aa15.66■□□□□ 0.1
SMARCA4-216ENST00000591545 GPTP24298 496 aa15.66■□□□□ 0.1
SMARCA4-216ENST00000591545 POLR3DP05423 398 aaPredicted RBP15.66■□□□□ 0.1
SMARCA4-216ENST00000591545 ZNF622Q969S3 477 aaKnown RBP eCLIP15.66■□□□□ 0.13e-8■■□□□ 13.2
SMARCA4-216ENST00000591545 ZNHIT6Q9NWK9 470 aaKnown RBP15.66■□□□□ 0.1
SMARCA4-216ENST00000591545 TRAPPC8Q9Y2L5 1435 aa15.66■□□□□ 0.1
SMARCA4-216ENST00000591545 RAB11FIP3O75154 756 aa15.66■□□□□ 0.1
SMARCA4-216ENST00000591545 ALDH1L2Q3SY69 923 aa15.66■□□□□ 0.1
SMARCA4-216ENST00000591545 ANKRD36BQ8N2N9 1353 aa15.66■□□□□ 0.1
SMARCA4-216ENST00000591545 CALRP27797 417 aaKnown RBP15.66■□□□□ 0.1
SMARCA4-216ENST00000591545 CCDC112Q8NEF3 446 aa15.65■□□□□ 0.1
SMARCA4-216ENST00000591545 DISP1Q96F81 1524 aa15.65■□□□□ 0.1
SMARCA4-216ENST00000591545 TNMDQ9H2S6 317 aa15.65■□□□□ 0.1
SMARCA4-216ENST00000591545 CDKL5O76039 1030 aa15.65■□□□□ 0.1
SMARCA4-216ENST00000591545 TBX22Q9Y458 520 aa15.65■□□□□ 0.1
SMARCA4-216ENST00000591545 KRT32Q14532 448 aa15.65■□□□□ 0.1
SMARCA4-216ENST00000591545 HSP90AB2PQ58FF8 381 aa15.65■□□□□ 0.1
SMARCA4-216ENST00000591545 MAP3K12Q12852 859 aa15.64■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms