RNA–Protein interactions for RNA: ENST00000591535.5

MBD1-225, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD1, Length 1,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-225ENST00000591535 DCTN1Q14203 1278 aa18.57■□□□□ 0.56
MBD1-225ENST00000591535 TXNRD1Q16881 649 aa18.57■□□□□ 0.56
MBD1-225ENST00000591535 SMARCC1Q92922 1105 aaPredicted RBP18.57■□□□□ 0.56
MBD1-225ENST00000591535 ASAP1Q9ULH1 1129 aa18.57■□□□□ 0.56
MBD1-225ENST00000591535 APAF1O14727 1248 aa18.56■□□□□ 0.56
MBD1-225ENST00000591535 RGPD3A6NKT7 1758 aaPredicted RBP18.55■□□□□ 0.56
MBD1-225ENST00000591535 RGPD4Q7Z3J3 1758 aa18.55■□□□□ 0.56
MBD1-225ENST00000591535 PALLDQ8WX93 1383 aa18.55■□□□□ 0.56
MBD1-225ENST00000591535 PROM2Q8N271 834 aa18.55■□□□□ 0.56
MBD1-225ENST00000591535 ATG3Q9NT62 314 aa18.55■□□□□ 0.56
MBD1-225ENST00000591535 ADAMTS7Q9UKP4 1686 aa18.54■□□□□ 0.56
MBD1-225ENST00000591535 LMOD3Q0VAK6 560 aa18.54■□□□□ 0.56
MBD1-225ENST00000591535 SENP3-EIF4A1A0A087X0R7 540 aa18.53■□□□□ 0.56
MBD1-225ENST00000591535 CCNL1Q9UK58 526 aaPredicted RBP18.53■□□□□ 0.56
MBD1-225ENST00000591535 CEMIPQ8WUJ3 1361 aa18.53■□□□□ 0.56
MBD1-225ENST00000591535 KCNQ4P56696 695 aa18.52■□□□□ 0.56
MBD1-225ENST00000591535 RBM42Q9BTD8 480 aaKnown RBP18.52■□□□□ 0.56
MBD1-225ENST00000591535 SLC39A6Q13433 755 aa18.52■□□□□ 0.55
MBD1-225ENST00000591535 SLC27A3Q5K4L6 730 aa18.52■□□□□ 0.55
MBD1-225ENST00000591535 THUMPD2Q9BTF0 503 aaKnown RBP18.52■□□□□ 0.55
MBD1-225ENST00000591535 MRC1P22897 1456 aa18.52■□□□□ 0.55
MBD1-225ENST00000591535 RREB1Q92766 1687 aa18.51■□□□□ 0.55
MBD1-225ENST00000591535 LY75O60449 1722 aa18.51■□□□□ 0.55
MBD1-225ENST00000591535 BTBD11A6QL63 1104 aa18.51■□□□□ 0.55
MBD1-225ENST00000591535 PTCD1O75127 700 aaKnown RBP18.51■□□□□ 0.55
MBD1-225ENST00000591535 NBPF14Q5TI25 921 aa18.51■□□□□ 0.55
MBD1-225ENST00000591535 TTC5Q8N0Z6 440 aa18.5■□□□□ 0.55
MBD1-225ENST00000591535 LRRC4BQ9NT99 713 aa18.5■□□□□ 0.55
MBD1-225ENST00000591535 NUP188Q5SRE5 1749 aa18.49■□□□□ 0.55
MBD1-225ENST00000591535 LOC102724428A0A0B4J2F2 783 aa18.49■□□□□ 0.55
MBD1-225ENST00000591535 SIK1P57059 783 aa18.49■□□□□ 0.55
MBD1-225ENST00000591535 TAF7Q15545 349 aaPredicted RBP18.49■□□□□ 0.55
MBD1-225ENST00000591535 SIPA1L3O60292 1781 aaPredicted RBP18.49■□□□□ 0.55
MBD1-225ENST00000591535 ATP6V1AP38606 617 aa18.49■□□□□ 0.55
MBD1-225ENST00000591535 TRIM35Q9UPQ4 493 aa18.49■□□□□ 0.55
MBD1-225ENST00000591535 SALL2Q9Y467 1007 aaPredicted RBP18.48■□□□□ 0.55
MBD1-225ENST00000591535 MIS18AQ9NYP9 233 aa18.47■□□□□ 0.55
MBD1-225ENST00000591535 ZNF790Q6PG37 636 aa18.46■□□□□ 0.55
MBD1-225ENST00000591535 STK32BQ9NY57 414 aa18.46■□□□□ 0.55
MBD1-225ENST00000591535 HMGB2P26583 209 aaKnown RBP18.45■□□□□ 0.54
MBD1-225ENST00000591535 LAS1LQ9Y4W2 734 aaKnown RBP18.45■□□□□ 0.54
MBD1-225ENST00000591535 PAPPAQ13219 1627 aa18.44■□□□□ 0.54
MBD1-225ENST00000591535 KCNQ3O43525 872 aa18.44■□□□□ 0.54
MBD1-225ENST00000591535 R3HDM1Q15032 1099 aaKnown RBP18.44■□□□□ 0.54
MBD1-225ENST00000591535 PSDA5PKW4 1024 aaPredicted RBP18.43■□□□□ 0.54
MBD1-225ENST00000591535 ITPK1Q13572 414 aa18.43■□□□□ 0.54
MBD1-225ENST00000591535 SLC4A9Q96Q91 983 aa18.43■□□□□ 0.54
MBD1-225ENST00000591535 ANO8Q9HCE9 1232 aaPredicted RBP18.43■□□□□ 0.54
MBD1-225ENST00000591535 C5P01031 1676 aa18.43■□□□□ 0.54
MBD1-225ENST00000591535 TAF1LQ8IZX4 1826 aa18.42■□□□□ 0.54
MBD1-225ENST00000591535 CALD1Q05682 793 aaKnown RBP18.42■□□□□ 0.54
MBD1-225ENST00000591535 SLC15A2Q16348 729 aa18.42■□□□□ 0.54
MBD1-225ENST00000591535 ZNF496Q96IT1 587 aaPredicted RBP18.42■□□□□ 0.54
MBD1-225ENST00000591535 FMNL2Q96PY5 1086 aa18.42■□□□□ 0.54
MBD1-225ENST00000591535 TSPYL4Q9UJ04 414 aa18.42■□□□□ 0.54
MBD1-225ENST00000591535 LINC00116Q8NCU8 138 aa18.41■□□□□ 0.54
MBD1-225ENST00000591535 TFCP2L1Q9NZI6 479 aa18.41■□□□□ 0.54
MBD1-225ENST00000591535 ZNF827Q17R98 1081 aa18.41■□□□□ 0.54
MBD1-225ENST00000591535 KCPQ6ZWJ8 1503 aa18.41■□□□□ 0.54
MBD1-225ENST00000591535 UBR2Q8IWV8 1755 aa18.4■□□□□ 0.54
MBD1-225ENST00000591535 DNAJC10Q8IXB1 793 aa18.4■□□□□ 0.54
MBD1-225ENST00000591535 AK7Q96M32 723 aa18.4■□□□□ 0.54
MBD1-225ENST00000591535 CCDC27Q2M243 656 aa18.39■□□□□ 0.53
MBD1-225ENST00000591535 WWC1Q8IX03 1113 aa18.39■□□□□ 0.53
MBD1-225ENST00000591535 VSIG10Q8N0Z9 540 aa18.39■□□□□ 0.53
MBD1-225ENST00000591535 AKT1S1Q96B36 256 aa18.39■□□□□ 0.53
MBD1-225ENST00000591535 HEG1Q9ULI3 1381 aa18.39■□□□□ 0.53
MBD1-225ENST00000591535 C4BP0C0L5 1744 aa18.38■□□□□ 0.53
MBD1-225ENST00000591535 BABAM1Q9NWV8 329 aa18.38■□□□□ 0.53
MBD1-225ENST00000591535 ZNF831Q5JPB2 1677 aa18.38■□□□□ 0.53
MBD1-225ENST00000591535 NCBP3Q53F19 620 aaKnown RBP18.38■□□□□ 0.53
MBD1-225ENST00000591535 KDM3BQ7LBC6 1761 aa18.37■□□□□ 0.53
MBD1-225ENST00000591535 CHL1O00533 1208 aa18.37■□□□□ 0.53
MBD1-225ENST00000591535 GNAI1P63096 354 aa18.37■□□□□ 0.53
MBD1-225ENST00000591535 NGEFQ8N5V2 710 aa18.37■□□□□ 0.53
MBD1-225ENST00000591535 CFAP44Q96MT7 982 aa18.37■□□□□ 0.53
MBD1-225ENST00000591535 TEX13AQ9BXU3 409 aaPredicted RBP18.37■□□□□ 0.53
MBD1-225ENST00000591535 TJP1Q07157 1748 aa18.37■□□□□ 0.53
MBD1-225ENST00000591535 STARD3NLO95772 234 aa18.36■□□□□ 0.53
MBD1-225ENST00000591535 SNRPA1P09661 255 aaKnown RBP18.36■□□□□ 0.53
MBD1-225ENST00000591535 COL5A3P25940 1745 aaPredicted RBP18.35■□□□□ 0.53
MBD1-225ENST00000591535 GNPATO15228 680 aa18.35■□□□□ 0.53
MBD1-225ENST00000591535 MSH5O43196 834 aa18.35■□□□□ 0.53
MBD1-225ENST00000591535 EIF4A1P60842 406 aaKnown RBP18.35■□□□□ 0.53
MBD1-225ENST00000591535 IFT57Q9NWB7 429 aa18.35■□□□□ 0.53
MBD1-225ENST00000591535 CRKLP46109 303 aaKnown RBP18.34■□□□□ 0.53
MBD1-225ENST00000591535 PHF14O94880 888 aa18.34■□□□□ 0.53
MBD1-225ENST00000591535 CYP19A1P11511 503 aaPredicted RBP18.34■□□□□ 0.53
MBD1-225ENST00000591535 RC3H1Q5TC82 1133 aaKnown RBP18.34■□□□□ 0.53
MBD1-225ENST00000591535 MBIPQ9NS73 344 aa18.34■□□□□ 0.53
MBD1-225ENST00000591535 CNTNAP4Q9C0A0 1308 aa18.33■□□□□ 0.53
MBD1-225ENST00000591535 PRAMEF22A3QJZ6 481 aa18.33■□□□□ 0.52
MBD1-225ENST00000591535 WDR63Q8IWG1 891 aa18.33■□□□□ 0.52
MBD1-225ENST00000591535 CCDC87Q9NVE4 849 aa18.33■□□□□ 0.52
MBD1-225ENST00000591535 RTCBQ9Y3I0 505 aaKnown RBP18.33■□□□□ 0.52
MBD1-225ENST00000591535 CICQ96RK0 1608 aaPredicted RBP18.32■□□□□ 0.52
MBD1-225ENST00000591535 ZNF853P0CG23 659 aa18.32■□□□□ 0.52
MBD1-225ENST00000591535 SMIM5Q71RC9 77 aa18.32■□□□□ 0.52
MBD1-225ENST00000591535 USP16Q9Y5T5 823 aa18.32■□□□□ 0.52
MBD1-225ENST00000591535 PNPLA7Q6ZV29 1317 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms