RNA–Protein interactions for RNA: ENST00000590576.5

SEPT9-229, Transcript of septin 9, humanhuman

TSL 3

Gene SEPT9, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEPT9-229ENST00000590576 AKAP4Q5JQC9 854 aa27.37■■□□□ 1.97
SEPT9-229ENST00000590576 ATG3Q9NT62 314 aa27.37■■□□□ 1.97
SEPT9-229ENST00000590576 KDM6AO15550 1401 aaPredicted RBP27.36■■□□□ 1.97
SEPT9-229ENST00000590576 HMOX1P09601 288 aa27.35■■□□□ 1.97
SEPT9-229ENST00000590576 ATP6V1AP38606 617 aa27.35■■□□□ 1.97
SEPT9-229ENST00000590576 COL23A1Q86Y22 540 aaPredicted RBP27.35■■□□□ 1.97
SEPT9-229ENST00000590576 COL3A1P02461 1466 aaPredicted RBP27.34■■□□□ 1.97
SEPT9-229ENST00000590576 SYT17Q9BSW7 474 aa27.33■■□□□ 1.97
SEPT9-229ENST00000590576 FHDC1Q9C0D6 1143 aaPredicted RBP27.33■■□□□ 1.97
SEPT9-229ENST00000590576 MAP3K5Q99683 1374 aa27.33■■□□□ 1.97
SEPT9-229ENST00000590576 COL5A3P25940 1745 aaPredicted RBP27.31■■□□□ 1.96
SEPT9-229ENST00000590576 U2SURPO15042 1029 aaKnown RBP27.31■■□□□ 1.96
SEPT9-229ENST00000590576 SSFA2P28290 1259 aa27.3■■□□□ 1.96
SEPT9-229ENST00000590576 NUDCQ9Y266 331 aa27.3■■□□□ 1.96
SEPT9-229ENST00000590576 NFATC2IPQ8NCF5 419 aa27.29■■□□□ 1.96
SEPT9-229ENST00000590576 RBM42Q9BTD8 480 aaKnown RBP27.29■■□□□ 1.96
SEPT9-229ENST00000590576 LINC00116Q8NCU8 138 aa27.28■■□□□ 1.96
SEPT9-229ENST00000590576 ADAMTS7Q9UKP4 1686 aa27.27■■□□□ 1.96
SEPT9-229ENST00000590576 ITPK1Q13572 414 aa27.26■■□□□ 1.95
SEPT9-229ENST00000590576 PPP2R1AP30153 589 aa27.25■■□□□ 1.95
SEPT9-229ENST00000590576 MTHFSDQ2M296 383 aaKnown RBP27.25■■□□□ 1.95
SEPT9-229ENST00000590576 CICQ96RK0 1608 aaPredicted RBP27.25■■□□□ 1.95
SEPT9-229ENST00000590576 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP27.24■■□□□ 1.95
SEPT9-229ENST00000590576 RC3H1Q5TC82 1133 aaKnown RBP27.24■■□□□ 1.95
SEPT9-229ENST00000590576 GAS2L2Q8NHY3 880 aa27.24■■□□□ 1.95
SEPT9-229ENST00000590576 SLC52A2Q9HAB3 445 aa27.24■■□□□ 1.95
SEPT9-229ENST00000590576 CHD4Q14839 1912 aa27.24■■□□□ 1.95
SEPT9-229ENST00000590576 GNPATO15228 680 aa27.23■■□□□ 1.95
SEPT9-229ENST00000590576 RNMTO43148 476 aaKnown RBP27.23■■□□□ 1.95
SEPT9-229ENST00000590576 PHF14O94880 888 aa27.23■■□□□ 1.95
SEPT9-229ENST00000590576 MRC1P22897 1456 aa27.23■■□□□ 1.95
SEPT9-229ENST00000590576 RTCBQ9Y3I0 505 aaKnown RBP27.22■■□□□ 1.95
SEPT9-229ENST00000590576 MYH14Q7Z406 1995 aaKnown RBP27.22■■□□□ 1.95
SEPT9-229ENST00000590576 CNTNAP4Q9C0A0 1308 aa27.2■■□□□ 1.95
SEPT9-229ENST00000590576 KLHL34Q8N239 644 aa27.2■■□□□ 1.94
SEPT9-229ENST00000590576 LGR6Q9HBX8 967 aa27.2■■□□□ 1.94
SEPT9-229ENST00000590576 PTCD1O75127 700 aaKnown RBP27.19■■□□□ 1.94
SEPT9-229ENST00000590576 ADRA2BP18089 450 aa27.19■■□□□ 1.94
SEPT9-229ENST00000590576 SLC4A9Q96Q91 983 aa27.19■■□□□ 1.94
SEPT9-229ENST00000590576 TJP1Q07157 1748 aa27.19■■□□□ 1.94
SEPT9-229ENST00000590576 TRAPPC3LQ5T215 181 aa27.18■■□□□ 1.94
SEPT9-229ENST00000590576 MSL1Q68DK7 614 aa27.18■■□□□ 1.94
SEPT9-229ENST00000590576 GNAT3A8MTJ3 354 aa27.17■■□□□ 1.94
SEPT9-229ENST00000590576 SIPA1L3O60292 1781 aaPredicted RBP27.16■■□□□ 1.94
SEPT9-229ENST00000590576 RPS6KA4O75676 772 aa27.15■■□□□ 1.94
SEPT9-229ENST00000590576 FCHSD2O94868 740 aa27.15■■□□□ 1.94
SEPT9-229ENST00000590576 U2AF1L5P0DN76 240 aaPredicted RBP27.15■■□□□ 1.94
SEPT9-229ENST00000590576 U2AF1Q01081 240 aaKnown RBP eCLIP27.15■■□□□ 1.94
SEPT9-229ENST00000590576 AMIGO3Q86WK7 504 aa27.15■■□□□ 1.94
SEPT9-229ENST00000590576 RSPH6AQ9H0K4 717 aa27.15■■□□□ 1.94
SEPT9-229ENST00000590576 UBR2Q8IWV8 1755 aa27.14■■□□□ 1.94
SEPT9-229ENST00000590576 PRKAR2BP31323 418 aa27.14■■□□□ 1.94
SEPT9-229ENST00000590576 TEFQ10587 303 aa27.13■■□□□ 1.93
SEPT9-229ENST00000590576 CD2APQ9Y5K6 639 aa27.13■■□□□ 1.93
SEPT9-229ENST00000590576 C4AP0C0L4 1744 aa27.13■■□□□ 1.93
SEPT9-229ENST00000590576 YY1P25490 414 aa27.12■■□□□ 1.93
SEPT9-229ENST00000590576 RFC4P35249 363 aa27.11■■□□□ 1.93
SEPT9-229ENST00000590576 NEFMP07197 916 aa27.1■■□□□ 1.93
SEPT9-229ENST00000590576 CRKLP46109 303 aaKnown RBP27.1■■□□□ 1.93
SEPT9-229ENST00000590576 GPR162Q16538 588 aa27.1■■□□□ 1.93
SEPT9-229ENST00000590576 SMIM5Q71RC9 77 aa27.1■■□□□ 1.93
SEPT9-229ENST00000590576 TTC5Q8N0Z6 440 aa27.1■■□□□ 1.93
SEPT9-229ENST00000590576 VSIG10Q8N0Z9 540 aa27.1■■□□□ 1.93
SEPT9-229ENST00000590576 NLGN1Q8N2Q7 840 aa27.1■■□□□ 1.93
SEPT9-229ENST00000590576 ARHGEF1Q92888 912 aaKnown RBP27.09■■□□□ 1.93
SEPT9-229ENST00000590576 KCPQ6ZWJ8 1503 aa27.08■■□□□ 1.93
SEPT9-229ENST00000590576 SLC39A6Q13433 755 aa27.08■■□□□ 1.93
SEPT9-229ENST00000590576 RALBP1Q15311 655 aa27.08■■□□□ 1.93
SEPT9-229ENST00000590576 IL17REQ8NFR9 667 aa27.07■■□□□ 1.92
SEPT9-229ENST00000590576 PHACTR3Q96KR7 559 aa27.07■■□□□ 1.92
SEPT9-229ENST00000590576 RTF1Q92541 710 aaKnown RBP27.06■■□□□ 1.92
SEPT9-229ENST00000590576 PNNQ9H307 717 aaKnown RBP27.06■■□□□ 1.92
SEPT9-229ENST00000590576 NLGN2Q8NFZ4 835 aa27.05■■□□□ 1.92
SEPT9-229ENST00000590576 DLG5Q8TDM6 1919 aa27.05■■□□□ 1.92
SEPT9-229ENST00000590576 KIF13BQ9NQT8 1826 aa27.04■■□□□ 1.92
SEPT9-229ENST00000590576 DNAJC10Q8IXB1 793 aa27.04■■□□□ 1.92
SEPT9-229ENST00000590576 CCDC87Q9NVE4 849 aa27.04■■□□□ 1.92
SEPT9-229ENST00000590576 CEMIPQ8WUJ3 1361 aa27.04■■□□□ 1.92
SEPT9-229ENST00000590576 HTATSF1O43719 755 aaKnown RBP27.03■■□□□ 1.92
SEPT9-229ENST00000590576 TEX13AQ9BXU3 409 aaPredicted RBP27.03■■□□□ 1.92
SEPT9-229ENST00000590576 DDX10Q13206 875 aaKnown RBP27.02■■□□□ 1.92
SEPT9-229ENST00000590576 ZNF790Q6PG37 636 aa27.02■■□□□ 1.92
SEPT9-229ENST00000590576 PELP1Q8IZL8 1130 aaKnown RBP27.02■■□□□ 1.92
SEPT9-229ENST00000590576 GRIN3BO60391 1043 aa27.01■■□□□ 1.91
SEPT9-229ENST00000590576 MMP10P09238 476 aa27.01■■□□□ 1.91
SEPT9-229ENST00000590576 CYP19A1P11511 503 aaPredicted RBP27.01■■□□□ 1.91
SEPT9-229ENST00000590576 INTS5Q6P9B9 1019 aaKnown RBP27.01■■□□□ 1.91
SEPT9-229ENST00000590576 STARD3NLO95772 234 aa27■■□□□ 1.91
SEPT9-229ENST00000590576 GYS1P13807 737 aa27■■□□□ 1.91
SEPT9-229ENST00000590576 ZEB1P37275 1124 aaPredicted RBP27■■□□□ 1.91
SEPT9-229ENST00000590576 BTBD11A6QL63 1104 aa26.98■■□□□ 1.91
SEPT9-229ENST00000590576 FMNL2Q96PY5 1086 aa26.98■■□□□ 1.91
SEPT9-229ENST00000590576 PARP3Q9Y6F1 533 aa26.98■■□□□ 1.91
SEPT9-229ENST00000590576 HEG1Q9ULI3 1381 aa26.97■■□□□ 1.91
SEPT9-229ENST00000590576 USP42Q9H9J4 1324 aaKnown RBP26.97■■□□□ 1.91
SEPT9-229ENST00000590576 ZPR1O75312 459 aa26.97■■□□□ 1.91
SEPT9-229ENST00000590576 SOS1Q07889 1333 aaPredicted RBP26.96■■□□□ 1.91
SEPT9-229ENST00000590576 ZNF496Q96IT1 587 aaPredicted RBP26.95■■□□□ 1.9
SEPT9-229ENST00000590576 UTRNP46939 3433 aa26.94■■□□□ 1.9
SEPT9-229ENST00000590576 COL15A1P39059 1388 aa26.94■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms