RNA–Protein interactions for RNA: ENST00000589990.1

PRKCSH-210, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 567 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-210ENST00000589990 ARHGAP27Q6ZUM4 889 aa17.96■□□□□ 0.47
PRKCSH-210ENST00000589990 C10orf71Q711Q0 1435 aa17.96■□□□□ 0.47
PRKCSH-210ENST00000589990 DPEP1P16444 411 aa17.95■□□□□ 0.46
PRKCSH-210ENST00000589990 SLC4A9Q96Q91 983 aa17.95■□□□□ 0.46
PRKCSH-210ENST00000589990 ATG3Q9NT62 314 aa17.94■□□□□ 0.46
PRKCSH-210ENST00000589990 TMOD3Q9NYL9 352 aa17.94■□□□□ 0.46
PRKCSH-210ENST00000589990 C4AP0C0L4 1744 aa17.93■□□□□ 0.46
PRKCSH-210ENST00000589990 CAPN15O75808 1086 aa17.93■□□□□ 0.46
PRKCSH-210ENST00000589990 HMGB2P26583 209 aaKnown RBP17.93■□□□□ 0.46
PRKCSH-210ENST00000589990 KDRP35968 1356 aa17.92■□□□□ 0.46
PRKCSH-210ENST00000589990 KCNA3P22001 575 aa17.92■□□□□ 0.46
PRKCSH-210ENST00000589990 TGFB2P61812 414 aa17.92■□□□□ 0.46
PRKCSH-210ENST00000589990 TONSLQ96HA7 1378 aa17.91■□□□□ 0.46
PRKCSH-210ENST00000589990 PPM1GO15355 546 aaPredicted RBP17.91■□□□□ 0.46
PRKCSH-210ENST00000589990 FCHSD2O94868 740 aa17.91■□□□□ 0.46
PRKCSH-210ENST00000589990 C9orf131Q5VYM1 1079 aa17.91■□□□□ 0.46
PRKCSH-210ENST00000589990 KLRG1Q96E93 195 aa17.91■□□□□ 0.46
PRKCSH-210ENST00000589990 EYA1Q99502 592 aa17.91■□□□□ 0.46
PRKCSH-210ENST00000589990 CARD14Q9BXL6 1004 aa17.91■□□□□ 0.46
PRKCSH-210ENST00000589990 SPG7Q9UQ90 795 aa17.91■□□□□ 0.46
PRKCSH-210ENST00000589990 KCPQ6ZWJ8 1503 aa17.91■□□□□ 0.46
PRKCSH-210ENST00000589990 KIF24Q5T7B8 1368 aa17.91■□□□□ 0.46
PRKCSH-210ENST00000589990 ANKRD26Q9UPS8 1709 aa17.9■□□□□ 0.46
PRKCSH-210ENST00000589990 PHKG2P15735 406 aa17.9■□□□□ 0.46
PRKCSH-210ENST00000589990 RBM46Q8TBY0 533 aaKnown RBP17.9■□□□□ 0.46
PRKCSH-210ENST00000589990 ARHGEF1Q92888 912 aaKnown RBP17.9■□□□□ 0.46
PRKCSH-210ENST00000589990 COL5A3P25940 1745 aaPredicted RBP17.89■□□□□ 0.46
PRKCSH-210ENST00000589990 GYS1P13807 737 aa17.89■□□□□ 0.45
PRKCSH-210ENST00000589990 TMF1P82094 1093 aa17.89■□□□□ 0.45
PRKCSH-210ENST00000589990 TRAPPC3LQ5T215 181 aa17.89■□□□□ 0.45
PRKCSH-210ENST00000589990 ARFGEF1Q9Y6D6 1849 aa17.88■□□□□ 0.45
PRKCSH-210ENST00000589990 MYH14Q7Z406 1995 aaKnown RBP17.88■□□□□ 0.45
PRKCSH-210ENST00000589990 JMYQ8N9B5 988 aa17.88■□□□□ 0.45
PRKCSH-210ENST00000589990 RTCBQ9Y3I0 505 aaKnown RBP17.88■□□□□ 0.45
PRKCSH-210ENST00000589990 NLGN1Q8N2Q7 840 aa17.87■□□□□ 0.45
PRKCSH-210ENST00000589990 IFNL2Q8IZJ0 200 aa17.86■□□□□ 0.45
PRKCSH-210ENST00000589990 RBM42Q9BTD8 480 aaKnown RBP17.86■□□□□ 0.45
PRKCSH-210ENST00000589990 CCDC87Q9NVE4 849 aa17.86■□□□□ 0.45
PRKCSH-210ENST00000589990 RRAGCQ9HB90 399 aa17.85■□□□□ 0.45
PRKCSH-210ENST00000589990 ZNF831Q5JPB2 1677 aa17.84■□□□□ 0.45
PRKCSH-210ENST00000589990 WASHC2AQ641Q2 1341 aa17.84■□□□□ 0.45
PRKCSH-210ENST00000589990 C16orf71Q8IYS4 520 aaPredicted RBP17.84■□□□□ 0.45
PRKCSH-210ENST00000589990 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.84■□□□□ 0.45
PRKCSH-210ENST00000589990 SRP68Q9UHB9 627 aaKnown RBP17.84■□□□□ 0.45
PRKCSH-210ENST00000589990 PARP3Q9Y6F1 533 aa17.84■□□□□ 0.45
PRKCSH-210ENST00000589990 SBF1O95248 1867 aa17.84■□□□□ 0.45
PRKCSH-210ENST00000589990 CHRNA5P30532 468 aa17.83■□□□□ 0.44
PRKCSH-210ENST00000589990 RFC4P35249 363 aa17.83■□□□□ 0.44
PRKCSH-210ENST00000589990 DDR1Q08345 913 aa17.83■□□□□ 0.44
PRKCSH-210ENST00000589990 DCAF5Q96JK2 942 aa17.83■□□□□ 0.44
PRKCSH-210ENST00000589990 RNF181Q9P0P0 153 aa17.83■□□□□ 0.44
PRKCSH-210ENST00000589990 PLEKHG2Q9H7P9 1386 aa17.82■□□□□ 0.44
PRKCSH-210ENST00000589990 CNTNAP4Q9C0A0 1308 aa17.82■□□□□ 0.44
PRKCSH-210ENST00000589990 RPS6KA4O75676 772 aa17.82■□□□□ 0.44
PRKCSH-210ENST00000589990 FSTL1Q12841 308 aa17.82■□□□□ 0.44
PRKCSH-210ENST00000589990 TNS4Q8IZW8 715 aa17.82■□□□□ 0.44
PRKCSH-210ENST00000589990 TNRC6CQ9HCJ0 1690 aaKnown RBP17.81■□□□□ 0.44
PRKCSH-210ENST00000589990 ADRA2BP18089 450 aa17.81■□□□□ 0.44
PRKCSH-210ENST00000589990 EIF4A2Q14240 407 aaKnown RBP17.81■□□□□ 0.44
PRKCSH-210ENST00000589990 FKBP8Q14318 412 aa17.81■□□□□ 0.44
PRKCSH-210ENST00000589990 RC3H1Q5TC82 1133 aaKnown RBP17.81■□□□□ 0.44
PRKCSH-210ENST00000589990 PIM2Q9P1W9 311 aa17.81■□□□□ 0.44
PRKCSH-210ENST00000589990 POLKQ9UBT6 870 aa17.81■□□□□ 0.44
PRKCSH-210ENST00000589990 KDM6AO15550 1401 aaPredicted RBP17.81■□□□□ 0.44
PRKCSH-210ENST00000589990 KDM2BQ8NHM5 1336 aa17.79■□□□□ 0.44
PRKCSH-210ENST00000589990 PRELPP51888 382 aa17.79■□□□□ 0.44
PRKCSH-210ENST00000589990 RASSF7Q02833 373 aa17.79■□□□□ 0.44
PRKCSH-210ENST00000589990 DALRD3Q5D0E6 543 aaKnown RBP17.79■□□□□ 0.44
PRKCSH-210ENST00000589990 TJP1Q07157 1748 aa17.78■□□□□ 0.44
PRKCSH-210ENST00000589990 ADAMTS7Q9UKP4 1686 aa17.78■□□□□ 0.44
PRKCSH-210ENST00000589990 SLC24A1O60721 1099 aa17.78■□□□□ 0.44
PRKCSH-210ENST00000589990 ERVV-2B6SEH9 535 aa17.77■□□□□ 0.44
PRKCSH-210ENST00000589990 PTCD1O75127 700 aaKnown RBP17.77■□□□□ 0.44
PRKCSH-210ENST00000589990 TNNT2P45379 298 aaPredicted RBP17.77■□□□□ 0.44
PRKCSH-210ENST00000589990 USP42Q9H9J4 1324 aaKnown RBP17.76■□□□□ 0.43
PRKCSH-210ENST00000589990 CRKLP46109 303 aaKnown RBP17.76■□□□□ 0.43
PRKCSH-210ENST00000589990 POLRMTO00411 1230 aaKnown RBP17.74■□□□□ 0.43
PRKCSH-210ENST00000589990 HSPA1AP0DMV8 641 aaKnown RBP17.74■□□□□ 0.43
PRKCSH-210ENST00000589990 HSPA1BP0DMV9 641 aaKnown RBP17.74■□□□□ 0.43
PRKCSH-210ENST00000589990 CABP4P57796 275 aa17.74■□□□□ 0.43
PRKCSH-210ENST00000589990 SMC1BQ8NDV3 1235 aa17.74■□□□□ 0.43
PRKCSH-210ENST00000589990 ZNF530Q6P9A1 599 aaPredicted RBP17.73■□□□□ 0.43
PRKCSH-210ENST00000589990 AFDNP55196 1824 aaKnown RBP17.72■□□□□ 0.43
PRKCSH-210ENST00000589990 TM4SF1P30408 202 aa17.72■□□□□ 0.43
PRKCSH-210ENST00000589990 INTS5Q6P9B9 1019 aaKnown RBP17.72■□□□□ 0.43
PRKCSH-210ENST00000589990 AEBP1Q8IUX7 1158 aa17.72■□□□□ 0.43
PRKCSH-210ENST00000589990 NFATC2IPQ8NCF5 419 aa17.71■□□□□ 0.43
PRKCSH-210ENST00000589990 TIAM2Q8IVF5 1701 aa17.71■□□□□ 0.43
PRKCSH-210ENST00000589990 CCDC88AQ3V6T2 1871 aa17.71■□□□□ 0.43
PRKCSH-210ENST00000589990 CDCA8Q53HL2 280 aa17.7■□□□□ 0.42
PRKCSH-210ENST00000589990 USPL1Q5W0Q7 1092 aa17.7■□□□□ 0.42
PRKCSH-210ENST00000589990 HSP90AB1P08238 724 aaKnown RBP17.69■□□□□ 0.42
PRKCSH-210ENST00000589990 POTECB2RU33 542 aa17.68■□□□□ 0.42
PRKCSH-210ENST00000589990 MTHFSP49914 203 aa17.68■□□□□ 0.42
PRKCSH-210ENST00000589990 PLEKHO1Q53GL0 409 aaPredicted RBP17.68■□□□□ 0.42
PRKCSH-210ENST00000589990 DLEC1Q9Y238 1755 aa17.68■□□□□ 0.42
PRKCSH-210ENST00000589990 CARMIL3Q8ND23 1372 aa17.67■□□□□ 0.42
PRKCSH-210ENST00000589990 NRXN2Q9P2S2 1712 aa17.67■□□□□ 0.42
PRKCSH-210ENST00000589990 GLTPD2A6NH11 291 aa17.67■□□□□ 0.42
PRKCSH-210ENST00000589990 VEGFAP15692 232 aaPredicted RBP17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms