RNA–Protein interactions for RNA: ENST00000589878.5

LSM14A-207, Transcript of LSM14A, mRNA processing body assembly factor, humanhuman

TSL 4

Gene LSM14A, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM14A-207ENST00000589878 NCAPD2Q15021 1401 aa25.48■■□□□ 1.67
LSM14A-207ENST00000589878 PHKG2P15735 406 aa25.48■■□□□ 1.67
LSM14A-207ENST00000589878 TRAPPC3LQ5T215 181 aa25.47■■□□□ 1.67
LSM14A-207ENST00000589878 ARHGAP27Q6ZUM4 889 aa25.47■■□□□ 1.67
LSM14A-207ENST00000589878 WASHC2AQ641Q2 1341 aa25.46■■□□□ 1.67
LSM14A-207ENST00000589878 CICQ96RK0 1608 aaPredicted RBP25.46■■□□□ 1.67
LSM14A-207ENST00000589878 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.46■■□□□ 1.674e-6■□□□□ 11.2
LSM14A-207ENST00000589878 RTCBQ9Y3I0 505 aaKnown RBP25.46■■□□□ 1.67
LSM14A-207ENST00000589878 KIAA1551Q9HCM1 1747 aa25.46■■□□□ 1.67
LSM14A-207ENST00000589878 KIF13BQ9NQT8 1826 aa25.45■■□□□ 1.66
LSM14A-207ENST00000589878 APLP1P51693 650 aa25.45■■□□□ 1.66
LSM14A-207ENST00000589878 TGFB2P61812 414 aa25.45■■□□□ 1.66
LSM14A-207ENST00000589878 RBM42Q9BTD8 480 aaKnown RBP25.45■■□□□ 1.66
LSM14A-207ENST00000589878 ANKRD26Q9UPS8 1709 aa25.43■■□□□ 1.66
LSM14A-207ENST00000589878 NLGN1Q8N2Q7 840 aa25.43■■□□□ 1.66
LSM14A-207ENST00000589878 TOMM70O94826 608 aa25.42■■□□□ 1.66
LSM14A-207ENST00000589878 FCHSD2O94868 740 aa25.42■■□□□ 1.66
LSM14A-207ENST00000589878 DPEP1P16444 411 aa25.42■■□□□ 1.66
LSM14A-207ENST00000589878 ARHGEF1Q92888 912 aaKnown RBP25.42■■□□□ 1.66
LSM14A-207ENST00000589878 SLC4A9Q96Q91 983 aa25.42■■□□□ 1.66
LSM14A-207ENST00000589878 NMRK2Q9NPI5 230 aa25.42■■□□□ 1.66
LSM14A-207ENST00000589878 CCDC87Q9NVE4 849 aa25.41■■□□□ 1.66
LSM14A-207ENST00000589878 POLKQ9UBT6 870 aa25.41■■□□□ 1.66
LSM14A-207ENST00000589878 TNNT2P45379 298 aaPredicted RBP25.4■■□□□ 1.66
LSM14A-207ENST00000589878 RFC4P35249 363 aa25.39■■□□□ 1.66
LSM14A-207ENST00000589878 DNAJC5GQ8N7S2 189 aa25.39■■□□□ 1.66
LSM14A-207ENST00000589878 PARP3Q9Y6F1 533 aa25.39■■□□□ 1.66
LSM14A-207ENST00000589878 C10orf71Q711Q0 1435 aa25.38■■□□□ 1.65
LSM14A-207ENST00000589878 GYS1P13807 737 aa25.38■■□□□ 1.65
LSM14A-207ENST00000589878 EIF4A2Q14240 407 aaKnown RBP25.38■■□□□ 1.65
LSM14A-207ENST00000589878 KDRP35968 1356 aa25.37■■□□□ 1.65
LSM14A-207ENST00000589878 C4AP0C0L4 1744 aa25.37■■□□□ 1.65
LSM14A-207ENST00000589878 RC3H1Q5TC82 1133 aaKnown RBP25.36■■□□□ 1.65
LSM14A-207ENST00000589878 POLR3GLQ9BT43 218 aa25.36■■□□□ 1.65
LSM14A-207ENST00000589878 ERVV-2B6SEH9 535 aa25.35■■□□□ 1.65
LSM14A-207ENST00000589878 C9orf131Q5VYM1 1079 aa25.35■■□□□ 1.65
LSM14A-207ENST00000589878 COL5A3P25940 1745 aaPredicted RBP25.34■■□□□ 1.65
LSM14A-207ENST00000589878 RPS6KA4O75676 772 aa25.34■■□□□ 1.65
LSM14A-207ENST00000589878 ADRA2BP18089 450 aa25.34■■□□□ 1.65
LSM14A-207ENST00000589878 BRCA1P38398 1863 aaKnown RBP25.34■■□□□ 1.65
LSM14A-207ENST00000589878 KCNA3P22001 575 aa25.33■■□□□ 1.65
LSM14A-207ENST00000589878 C16orf71Q8IYS4 520 aaPredicted RBP25.33■■□□□ 1.65
LSM14A-207ENST00000589878 CNTNAP4Q9C0A0 1308 aa25.33■■□□□ 1.64
LSM14A-207ENST00000589878 CABP4P57796 275 aa25.32■■□□□ 1.64
LSM14A-207ENST00000589878 HTRA3P83110 453 aa25.32■■□□□ 1.64
LSM14A-207ENST00000589878 DCAF5Q96JK2 942 aa25.32■■□□□ 1.64
LSM14A-207ENST00000589878 MYH14Q7Z406 1995 aaKnown RBP25.32■■□□□ 1.64
LSM14A-207ENST00000589878 PTCD1O75127 700 aaKnown RBP25.31■■□□□ 1.64
LSM14A-207ENST00000589878 HSP90AB1P08238 724 aaKnown RBP25.31■■□□□ 1.64
LSM14A-207ENST00000589878 ZNF831Q5JPB2 1677 aa25.31■■□□□ 1.64
LSM14A-207ENST00000589878 WDR90Q96KV7 1748 aa25.3■■□□□ 1.64
LSM14A-207ENST00000589878 PLEKHO1Q53GL0 409 aaPredicted RBP25.3■■□□□ 1.64
LSM14A-207ENST00000589878 ZNF530Q6P9A1 599 aaPredicted RBP25.3■■□□□ 1.64
LSM14A-207ENST00000589878 PIM2Q9P1W9 311 aa25.3■■□□□ 1.64
LSM14A-207ENST00000589878 SRP68Q9UHB9 627 aaKnown RBP25.3■■□□□ 1.64
LSM14A-207ENST00000589878 ARFGEF1Q9Y6D6 1849 aa25.29■■□□□ 1.64
LSM14A-207ENST00000589878 RBM46Q8TBY0 533 aaKnown RBP25.29■■□□□ 1.64
LSM14A-207ENST00000589878 DALRD3Q5D0E6 543 aaKnown RBP25.27■■□□□ 1.64
LSM14A-207ENST00000589878 KDM6AO15550 1401 aaPredicted RBP25.27■■□□□ 1.64
LSM14A-207ENST00000589878 CRKLP46109 303 aaKnown RBP25.26■■□□□ 1.63
LSM14A-207ENST00000589878 MTHFSP49914 203 aa25.26■■□□□ 1.63
LSM14A-207ENST00000589878 FKBP8Q14318 412 aa25.26■■□□□ 1.63
LSM14A-207ENST00000589878 RNF181Q9P0P0 153 aa25.26■■□□□ 1.63
LSM14A-207ENST00000589878 KCPQ6ZWJ8 1503 aa25.26■■□□□ 1.63
LSM14A-207ENST00000589878 CHRNA5P30532 468 aa25.25■■□□□ 1.63
LSM14A-207ENST00000589878 RRAGCQ9HB90 399 aa25.25■■□□□ 1.63
LSM14A-207ENST00000589878 PLEKHG2Q9H7P9 1386 aa25.24■■□□□ 1.63
LSM14A-207ENST00000589878 DDR1Q08345 913 aa25.24■■□□□ 1.63
LSM14A-207ENST00000589878 NFATC2IPQ8NCF5 419 aa25.24■■□□□ 1.63
LSM14A-207ENST00000589878 KDM2BQ8NHM5 1336 aa25.23■■□□□ 1.63
LSM14A-207ENST00000589878 KLRG1Q96E93 195 aa25.23■■□□□ 1.63
LSM14A-207ENST00000589878 AMOTQ4VCS5 1084 aa25.22■■□□□ 1.63
LSM14A-207ENST00000589878 C1orf141Q5JVX7 400 aa25.22■■□□□ 1.63
LSM14A-207ENST00000589878 USP42Q9H9J4 1324 aaKnown RBP25.21■■□□□ 1.63
LSM14A-207ENST00000589878 FSTL1Q12841 308 aa25.21■■□□□ 1.63
LSM14A-207ENST00000589878 AEBP1Q8IUX7 1158 aa25.21■■□□□ 1.63
LSM14A-207ENST00000589878 COL13A1Q5TAT6 717 aaPredicted RBP25.2■■□□□ 1.62
LSM14A-207ENST00000589878 SBF1O95248 1867 aa25.19■■□□□ 1.62
LSM14A-207ENST00000589878 TJP1Q07157 1748 aa25.18■■□□□ 1.62
LSM14A-207ENST00000589878 CAPN15O75808 1086 aa25.17■■□□□ 1.62
LSM14A-207ENST00000589878 INTS5Q6P9B9 1019 aaKnown RBP25.17■■□□□ 1.62
LSM14A-207ENST00000589878 POLRMTO00411 1230 aaKnown RBP25.16■■□□□ 1.62
LSM14A-207ENST00000589878 USPL1Q5W0Q7 1092 aa25.16■■□□□ 1.62
LSM14A-207ENST00000589878 ZPR1O75312 459 aa25.15■■□□□ 1.62
LSM14A-207ENST00000589878 TM4SF1P30408 202 aa25.15■■□□□ 1.62
LSM14A-207ENST00000589878 RASSF7Q02833 373 aa25.15■■□□□ 1.62
LSM14A-207ENST00000589878 SULT6B1Q6IMI4 303 aa25.15■■□□□ 1.62
LSM14A-207ENST00000589878 JMYQ8N9B5 988 aa25.15■■□□□ 1.62
LSM14A-207ENST00000589878 PANK3Q9H999 370 aa25.15■■□□□ 1.62
LSM14A-207ENST00000589878 TNRC6CQ9HCJ0 1690 aaKnown RBP25.14■■□□□ 1.62
LSM14A-207ENST00000589878 DNAJC10Q8IXB1 793 aa25.14■■□□□ 1.62
LSM14A-207ENST00000589878 MORC1Q86VD1 984 aa25.12■■□□□ 1.61
LSM14A-207ENST00000589878 SCN11AQ9UI33 1791 aa25.11■■□□□ 1.61
LSM14A-207ENST00000589878 ADAMTS7Q9UKP4 1686 aa25.11■■□□□ 1.61
LSM14A-207ENST00000589878 SMC1BQ8NDV3 1235 aa25.11■■□□□ 1.61
LSM14A-207ENST00000589878 AFDNP55196 1824 aaKnown RBP25.1■■□□□ 1.61
LSM14A-207ENST00000589878 SLC39A6Q13433 755 aa25.08■■□□□ 1.61
LSM14A-207ENST00000589878 NFIXQ14938 502 aa25.08■■□□□ 1.61
LSM14A-207ENST00000589878 LGR6Q9HBX8 967 aa25.08■■□□□ 1.61
LSM14A-207ENST00000589878 SOS1Q07889 1333 aaPredicted RBP25.08■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms